Vulpes lagopus (Arctic fox): 121489351
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Entry
121489351 CDS
T07435
Symbol
CHD2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X1
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
vlg
Vulpes lagopus (Arctic fox)
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vlg03036
]
121489351 (CHD2)
Chromosome and associated proteins [BR:
vlg03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
121489351 (CHD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
121489351
NCBI-ProteinID:
XP_041608243
LinkDB
All DBs
Position
4:complement(107279923..107402003)
Genome browser
AA seq
1840 aa
AA seq
DB search
MAHKHRGGCVNLSPCIFTWYHTFSQLAFDGGTLSHSASEEASGSDSGSQSESEQGSDPGS
GHGSESNSSSESSESQSESESESAGSKSQPVLPEAKEKPASKKERIADVKKMWEEYPDVY
GVRRSNRSRQEPSRFNIKEEASSGSESGSPKRRGQRQLKKQEKWKREPSEDEQEQGTSAE
SEAEQKKVKARRPVPRRTVPKPRVKKQPKTQRGKRKRQDSSDDDDEDDEAPKRQTRRRAA
KNVSYKEDDDFETDSDDLIEMTGEGADEQQDNSETIEKVLDSRLGKKGATGASTTVYAIE
ANGDPSGDFDTEKDESEVQYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDE
IKQWLGKVSPEDVEYFNCQQELASELNKQYQIVERVIAVKTSKSTLGQTDFPAHSRKPAP
SNEPEYLCKWMGLPYSECSWEDEALIGKKFQSCIDSFHSRNNSKTIPTRECKALKQRPRF
VALKKQPTYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLF
HQHQLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRL
KFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSHHRLLITGT
PLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKGRENGYQSLHKVLEPFLLRRVKKDVEK
SLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYL
IKPPEENERENGQEVLLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYL
TIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDS
DWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTG
RTVLENNSGRSNSNPFNKEELTAILKFGAEDLFKELEGEESEPQEMDIDEILRLAETREN
EVSTSATDELLSQFKVANFATMEDEEELEERPHKDWDEIIPEEQRKKVEEEERQKELEEI
YMLPRIRSSTKKAQTNDSDSDTESKRQAQRSSASESETDDSDDDKKPKRRGRPRSVRKDL
VEGFTDAEIRRFIKAYKKFGLPLERLECIARDAELVDKSVADLKRLGELIHNSCVSAMQE
YEEQLKENASEGKGPGKKRGPTIKISGVQVNVKSIIQHEEEFEMLHKSIPVDPEEKKKYC
LTCRVKAAHFDVEWGVEDDSRLLLGIYEHGYGNWELIKTDPELKLTDKILPVETDKKPQG
KQLQTRADYLLKLLRKSLEKKGAVTGGEEAKLKKRKPRVKKENKEPRLKDEHGVEFSSPR
HSDNPSEEGEVKDDGLEKSPMKKKQKKKENKENKEKQMSSRKDKEGDKERKKSKDKKEKP
KGGDAKSSSKSKRSQGPVHITAGSEPVPIGEDEDDDLDQETFSICKERMRPVKKALKQLD
KPDKGLNVQEQLEHTRNCLLKIGDRIAECLKAYSDQEHIKLWRRNLWIFVSKFTEFDARK
LHKLYKMAHKKRSQEEEEQKKKDDVIGGKKPFRPEASGSSRDSLISQSHTPHNLHPQKPH
LPASHGPQMHGHPRDNYNHPNKRHFSNADRGDWQRERKFNYGGGNNPPWGSDRHHQYEQH
WYKDHHYGDRRHMDAHRSGSYRPNNLSRKRPYEQYSSDRDHRGHRDYYDRHHHDSKRRRS
DEFRPQNYHQQDFRRMSDHRPPMGYHGQGPSDHYRSFHTDKLGEYKQPLPPLHPAVSDPR
SPPSQKSPHDSKSPLDHRSPLERSLEQKNNPDYNWNVRKT
NT seq
5523 nt
NT seq
+upstream
nt +downstream
nt
atggctcataaacacaggggcggttgtgtgaacttgtccccgtgcatttttacttggtac
cacacattttctcagttggcatttgatggaggaacactcagtcactcagcatctgaagaa
gcttccggttcagactcaggcagccagtcggagagtgagcagggcagcgatccaggaagc
ggacatggcagtgagtcaaatagcagttctgagtcttcagagagccaatcggaatctgaa
agtgagtcggcgggttctaaatcccagccagtccttccagaagccaaagagaagcctgcc
tctaagaaggaacggatagctgatgtgaagaagatgtgggaagaatatcctgatgtttat
ggggttaggcggtcaaaccgaagcagacaagaaccatcacgatttaatattaaggaggag
gcaagtagcgggtctgagagtgggagcccaaaaagaagaggccagaggcagctgaagaaa
caagaaaaatggaaacgggagccctcagaagatgaacaggagcaaggcaccagtgcagag
agcgaagcagagcaaaaaaaagtgaaagccagaagacctgtccccagaagaacagtgccc
aaacctcgtgttaaaaagcagcctaagactcagcgtggcaagagaaaaagacaggattct
tctgatgatgatgatgaagacgatgaagctcctaagaggcagactcggcgcagagcagct
aaaaatgttagttacaaggaagatgatgactttgagaccgactctgatgacctcattgag
atgactggagaaggagccgatgagcagcaggataacagtgaaactattgaaaaggtctta
gattcaaggctgggaaagaaaggagccactggagcttctactactgtatatgcgattgaa
gctaatggagaccctagtggtgactttgacactgaaaaggatgaaagcgaagtccagtac
ctcatcaagtggaagggttggtcttatatccacagcacatgggagagtgaagaatcctta
cagcagcagaaagtgaaaggactaaaaaaattagagaacttcaagaagaaagaggatgaa
atcaagcaatggttaggaaaagtttctcctgaagatgtggaatattttaactgccaacaa
gagctggcctcagagttgaacaaacagtatcagatagtcgaaagagtaattgctgtgaag
acaagcaaatctacactgggtcagacagattttccagctcacagtcggaagccggcgcct
tcaaatgaacctgagtatctatgcaaatggatgggactgccatattcagagtgcagctgg
gaagatgaagccttgattggcaagaagttccagagctgcattgacagcttccatagtcgg
aacaactcaaaaaccatcccaacaagagaatgcaaggccttgaagcagagaccacgattt
gtggctttaaagaaacagccgacatatttaggaggggagaatctggagctccgtgattat
cagctagaaggtctcaactggcttgctcattcctggtgcaaaagtaacagtgtaatcctt
gctgatgaaatgggcctaggaaagaccatccagaccatatcattcctctcctacctgttc
caccaacaccagctgtatggcccctttcttatagtcgtccctttatccaccctcacctca
tggcagagggagtttgaaatctgggcaccagagattaacgtagtggtttacataggtgac
ctgatgagcagaaatacgatacgggaatatgaatggattcattctcagactaaaagactg
aagttcaatgcacttataacaacatatgagatcctcttaaaagataagactgtgctgggc
agtattaactgggcctttctgggagtggatgaagcccatcggttgaagaatgatgactct
ttattgtataaaactctgattgatttcaagtcccaccataggctcctgattacggggacc
cctcttcagaattccctcaaagagctctggtccttgctgcactttattatgccggagaag
tttgaattctgggaagattttgaagaggaccatgggaaagggagggagaatggctaccag
agtctccataaggtgctggagcccttcctcctccggagagtcaaaaaggatgtggagaaa
tcccttcctgccaaagtggaacagatcctcagggtggagatgtctgctctgcagaagcag
tattacaagtggatcctgaccagaaactataaggctcttgccaaagggacaagaggcagc
acatctggtttcctgaatattgtgatggagttgaaaaagtgctgtaaccactgctacctg
atcaagccccccgaggagaatgagcgagagaacgggcaggaggttcttctgtccctgatc
aggagcagtgggaagctgattctcttagataaactgttgacaaggcttcgagaaaggggc
aacagagtcctaatcttctcccagatggtcagaatgttggacattctggctgagtacctg
acaatcaagcactaccctttccagcgtctggatggttccatcaagggagaaatccgaaaa
caggccctggaccacttcaatgcagatgggtctgaggacttctgtttcctgctctcgaca
agggctggtggcctgggaatcaatctggcttcggcggacacagtcgtcatctttgactct
gactggaacccccagaacgacttgcaggcacaagcccgagcccatagaattggtcagaag
aagcaggtaaatatttatcgcttggttacaaaggggactgtggaggaggagatcattgaa
cgggccaaaaagaagatggtattggaccatctggtgattcagcgcatggatactactggt
cggacagttctggaaaacaactcgggaaggtccaactcaaatccttttaataaagaagag
ctgacagctattttgaaatttggagcagaggatctcttcaaagaacttgaaggggaggag
tcagagcctcaggaaatggacatagatgaaattttgcgcttggctgaaactagagagaat
gaagtgtcaacaagtgcaacagatgaacttctgtcacagtttaaggttgccaactttgca
acaatggaagatgaagaagagctggaagagcgtcctcacaaggactgggatgagatcatt
ccagaggagcaaaggaaaaaagtagaagaggaagagcgtcagaaggagctagaagaaatt
tacatgttgccccgaattcggagttccacgaaaaaggctcagacaaatgacagtgattct
gacactgagtccaagaggcaggcccagagatcctctgcttctgagagtgagacagatgac
tctgatgatgacaagaagccaaagcgcagagggcgccccagaagcgtgcggaaggacctt
gtcgagggatttactgatgcagagatacgaaggttcatcaaggcatataagaagtttggt
ctccctcttgaacggctggagtgcatagcacgggatgctgagctggtggataagtctgta
gcagatctgaaacgactgggggaactgattcacaacagctgtgtgtcagcaatgcaggag
tatgaagaacagctgaaagaaaatgccagcgaggggaaaggaccagggaaaaaaagaggc
ccaacaatcaaaatatcgggggttcaggttaacgtgaaatccattatacaacatgaggaa
gagtttgagatgctgcataaatctatccctgtggaccctgaagaaaaaaaaaaatactgc
ttaacctgtcgagtgaaagctgcacattttgatgtggagtggggggtggaggatgattca
agactactgctgggaatttatgaacatggctatggaaactgggagttaattaagacggat
ccagagcttaagctaactgacaaaattctgcctgtggagacagataaaaagcctcagggg
aagcaactgcagacccgagcggactacttgctgaagctgctcaggaagagtctggagaag
aagggggctgtgacgggcggggaggaggccaaattaaagaagcggaagcctcgagtaaag
aaggaaaacaaagaacccaggctgaaagatgagcatggggttgagttttcatctcctaga
cactcagacaatccatcagaagagggagaagtaaaggatgatggcttagaaaaaagtcca
atgaaaaagaaacagaagaagaaagagaacaaggagaacaaggagaaacaaatgagttct
aggaaagacaaagaaggggacaaggaaaggaagaagtcaaaagataagaaagagaagcct
aaaggtggtgatgccaaatcttcaagtaaatcaaagcgatctcagggtcctgtccatatt
acagcaggaagtgaacctgtccccattggagaggatgaggatgatgatctggaccaggag
acattcagcatatgcaaagagaggatgaggcctgtgaaaaaggcactgaaacagttggac
aaacctgacaaggggctcaatgtgcaggaacagctggagcacacccgaaactgcctcctg
aaaattggagaccggatagccgagtgccttaaagcctactcagaccaggagcatatcaaa
ctgtggaggaggaacctatggatttttgtttccaagtttacagaatttgatgctcgaaaa
ttgcataagttatacaagatggctcataagaaaaggtctcaagaagaggaggagcaaaag
aagaaagatgatgtaattggtggtaagaagccatttcgaccagaggcctcgggctccagc
cgggactccctgatatctcagtcccacactccacacaaccttcaccctcagaagcctcac
ttgcctgcctcccatggcccacagatgcatggacacccacgagataactataatcacccc
aacaagagacattttagtaatgcagatcgaggagactggcagagggaaagaaagtttaac
tatggtggtggcaacaatcctccgtggggtagtgacagacaccatcagtatgagcagcac
tggtataaggaccaccattatggggaccggcgacacatggacgcccaccgttctgggagc
tatagacccaacaacctgtccagaaagagaccttatgaacagtacagcagtgatcgagac
cacaggggacacagagattattatgacaggcatcatcatgactctaagcggaggagatct
gatgagtttcggcctcaaaattaccaccagcaggatttccgacgaatgtctgaccaccgc
cccccgatgggctatcatggccaaggaccctcagaccattaccgctctttccacacagac
aaattgggggagtataaacagcccctgccccctctgcaccctgcagtctcagaccctcgc
tcacccccttctcagaagtctccccacgattccaagtcacccctggatcacaggtctcct
ttggagagatcattagaacagaaaaacaatccagattataactggaatgttcggaaaaca
taa
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