Vulpes lagopus (Arctic fox): 121489953 Help Entry 121489953         CDS       T07435                                  Symbol RC3H1 Name (RefSeq) roquin-1 isoform X1   KO K15690   RING finger and CCCH-type zinc finger domain-containing protein Organism vlg  Vulpes lagopus (Arctic fox) Brite KEGG Orthology (KO) [BR:vlg00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:vlg03000]     121489953 (RC3H1)    04121 Ubiquitin system [BR:vlg04121]     121489953 (RC3H1) Transcription factors [BR:vlg03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     121489953 (RC3H1) Ubiquitin system [BR:vlg04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     121489953 (RC3H1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX zf-RING_2 zf-C3HC4_4 Prok-RING_4 zf-CCCH zf-C3HC4_3 zf-C3HC4 zf-CCCH_UNK zf-C3HC4_2 zf_CCCH_4 FYVE zf-CCCH_4 Vesi_VP2 PaaA_PaaC Baculo_IE-1 zf-RING_4 zf-RING_6 zf-RING_10 Motif Other DBs NCBI-GeneID:  121489953 NCBI-ProteinID:  XP_041609383 LinkDB All DBs Position 1:complement(160829390..160909147) Genome browser AA seq 1132 aa AA seqDB search MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD IELLPVNSALLQLVGAQVPEQQPITLCSGVEDTKHYEEAKKCVEELALYLKPLSSARGVG LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGADQQQPPQHSKYKTYMCR DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSAAVLPDE GAVDLPSRKTPALPNGIVSAGTTVTQLIPRGTDPTYDSSLKPGKIDHLSSSAPGSPPDLL ESVPKSISALPVNPHPVPPRGPTDLPPMPVTKPLQMVPRGSQLYPAQQADVYYQDPRGAA PPFEPAPYQQGMYYTTPPQCVSRFVRPPPSAPEPGPPYLDHYPPYLQDRVVNSQYGTQPQ QYPPMYPPHYDGRRVYPAQSYTREEIFRESPIPIEIPPAAVPSYVPESRERYQQMEGYYP VAPHPTQIRPSYMRDPPYSRLPPPPQPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSP TLPPTFHQEEFMDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAVGSVEM MNVESKGMRDQRLDLQRRAAETSDDDLIPFGDRPTVSRFGAISRTSKTIYQGAGPLQAMA PQGAPTKPINISDYTPYGTHGGWGGSPYSPHQNIPSQGHFSERERISMSEVASHGKPLPS AEREQLRLELQQLNHQISQQTQLRGLEAVSNRLLLQREVNTLAGQSQPPPPPPKWPGMIS SEQLSLELHQVEREIGKRTRELSLENQCTLDMKSKLNTSKQAENGQPEPQNKVSAEDLTL TFSDVPNGSALTQENISLLSNKTSSLNLSEDPEGGGDNNDSQRAGVTSTSAP NT seq 3399 nt NT seq  +upstreamnt  +downstreamnt atgcctgtacaagctccacaatggacggatttcctctcctgcccaatttgcactcagact ttcgatgaaacaattcgaaagcccatcagtttgggttgtggtcatactgtctgcaagatg tgcctgaataaactccaccgcaaggcttgcccatttgaccagaccactatcaatacagat attgagctcctccccgtgaactcagcattgctgcagctagtaggtgctcaggtccctgag cagcagcccattactttgtgtagtggggttgaagatacaaagcattatgaggaagctaag aaatgtgtagaagaattagcattgtacctgaaaccactcagcagtgctagaggagtgggt ctgaatagcactacgcagagtgttctgagtcgcccaatgcagagaaagctggtgactctg gtccactgccaactagtggaagaagaaggcaggattcgtgctatgagagcagctcgatct ttaggtgaacggacagttacagagctcattcttcagcaccagaatccccagcagctctcc tccaatctctgggcagcagtcagggctaggggctgccagttccttggaccagcaatgcaa gaggaagctctaaagctggttctcctggccttggaagatggttctgctttgtcaagaaaa gtattggttctctttgtggtgcaaaggttggagccacggtttcctcaagcctctaaaact agcattgggcatgttgtccagctcctttatagagcctcctgcttcaaggtcaccaaacgt gatgaagactcttctttgatgcaactgaaagaggagtttagaacctatgaagctctgcgg cgagaacatgactcccagatagtgcaaattgctatggaagcaggcttacgaattgcacca gaccaatggtcctctttgctttatggagaccagtctcataagtctcatatgcagtcaatt attgacaagttgcagaccccagcctcttttgcacaaagtgttcaggaattaacaattgct ctccagcgaactggagatccagcaaacttgaaccgactaagaccccatttggagctattg gcaaacattgaccctagtccagatgcccctcctcctacttgggaacagctagaaaatgga ctggttgctgtgcgtactgtggtacatgggctagtagactatatccagaaccatagcaaa aagggagcagatcaacagcagcccccacagcatagcaaatataaaacatacatgtgtcga gatatgaagcagagaggaggatgtcctcgtggggccagctgtacatttgcacactcacag gaggaactggagaagtttcgtaaaatgaacaaacgtctggttcccagaagacccctgagt gcctctttgggtcagcttaatgaggtgggcctgccttcagcagctgtccttccagatgaa ggtgcagtggatctgcctagcagaaaaacccctgctctgcccaatggaattgtatcagca gggactacagtaacacaactgattccacgagggacagaccccacctatgattccagtctg aagccaggaaagatagatcatctgagcagtagtgcccctggatcccctcctgacctgtta gaatctgtccctaagagtatttctgccttacctgtgaatccacatcctgtacctccaagg gggccaacagacctgcctcctatgcctgtcaccaaaccacttcagatggtaccacgaggt tctcagttatatccagcgcaacaggcagatgtttattatcaggatcctcgaggagctgct ccaccatttgaaccagcaccttatcaacagggtatgtactatactacaccaccacagtgt gtatctcgctttgtcagacctccaccatctgctcctgaacctggtcctccctacttggat cattatccaccctatctccaagatcgtgtagtaaactctcagtatggcacacagccacaa caatacccacctatgtacccaccacactatgatggccgccgagtataccctgctcagtct tatacaagagaggagattttccgagaaagtcctatacccattgagattccacctgcagca gtgccatcctatgtaccagaatccagagaaagataccaacagatggagggttactatcca gtggctcctcatccaactcagatcagaccttcgtacatgagagaccctccttatagccgg cttcctcctcctcctcagccccatcctagcctagatgagctacatcgcagacgaaaggaa ataatggcccagctagaggaaaggaaagttatctctccacctccttttgcaccttcacca acattgcctcctacctttcatcaagaggaatttatggatgaagacctgaaggtagctggg aaatacaaaggaaatgactacagccagtattctccctggtcatgtgacaccatcggctcc tacattggaaccaaagatgccaaacccaaagatgtggtggcagtggggagtgtggaaatg atgaatgtggagagtaaaggaatgagagaccagagactggatcttcagagaagagcagca gaaaccagtgatgatgaccttatcccatttggagaccgaccaaccgtatctcggtttggt gccatctctcgaacttctaaaacaatatatcagggtgctggtccattgcaggctatggca cctcagggagctcccacaaaacctattaatatttcagactatactccatatggaacccat ggcggctggggaggttctccatattcacctcatcagaacataccttctcagggacacttc agtgagagggagagaatatccatgtcagaagtggccagtcatggaaagccccttccatct gctgagagggaacagctacgactagaattacaacagctaaaccaccaaattagccaacag actcagctacgtggactagaggctgttagtaacaggctgctgttgcagagggaggtcaac accctggcaggccagtcacagcccccaccaccacctccaaaatggcctgggatgatttca agtgagcaattgagtttggaactgcaccaggtggaaagggaaatcgggaagagaacccgg gaactgagtctggagaaccagtgtactctggacatgaaaagcaaattgaatacaagtaaa caagcagaaaatggacaaccagaaccacaaaataaggtttcagctgaggaccttacattg acattcagtgatgtaccaaatggctcagctttgacacaagagaatatcagcctcctgtca aacaagaccagctctctgaacctgtcagaggatcccgagggaggaggtgacaacaatgac tcccagagagctggagtcacatccacttctgctccctaa

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