KEGG   Vulpes lagopus (Arctic fox): 121491035
Entry
121491035         CDS       T07435                                 
Symbol
BCAS2
Name
(RefSeq) pre-mRNA-splicing factor SPF27
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
vlg  Vulpes lagopus (Arctic fox)
Pathway
vlg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vlg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121491035 (BCAS2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vlg03041]
    121491035 (BCAS2)
   03400 DNA repair and recombination proteins [BR:vlg03400]
    121491035 (BCAS2)
Spliceosome [BR:vlg03041]
 Complex B
  Other components
   Prp19 complex
    121491035 (BCAS2)
 Complex C
   Prp19-CDC5 complex
    121491035 (BCAS2)
DNA repair and recombination proteins [BR:vlg03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    121491035 (BCAS2)
SSDB
Motif
Pfam: BCAS2 HAUS2 THOC7 Relaxase_C Tup_N Transcrip_act OmpH INO80F Beta-prop_NUP159_NUP214 DUF3450 CENP-F_leu_zip PRKG1_interact
Other DBs
NCBI-GeneID: 121491035
NCBI-ProteinID: XP_041611319
LinkDB
Position
5:81608174..81622086
AA seq 225 aa
MAGTGLVAGEVVVDALPYFDQGYEAPGVREAAAALVEEETRRYRPTKNYLSYLTAPDYSA
FETDIMRNEFERLAARQPIELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVR
IENLELMSQHGCNAWKVYNENLVHMIEHAQKELQKLRKHIQDLNWQRKNMQLTAGSKLRE
MESTWVSLVSKNYEIERTIVQLENEIFQMKQQHGEANKENIRQDF
NT seq 678 nt   +upstreamnt  +downstreamnt
atggcgggcacgggtttagtcgccggagaggtggtggtagatgcgctgccgtattttgac
caaggttatgaagcgccgggtgtgcgggaagcggctgcagcgctggtggaggaggaaacc
cgcagataccgacccactaagaactacctgagctacttgacagccccggattactcagct
ttcgaaactgacataatgagaaatgaatttgaaagactggctgctcgacaaccaatagaa
ttactcagtatgaaacgatatgaacttccagccccttcctcgggtcagaaaaatgacatt
actgcatggcaagaatgtgtaaacaattctatggcccagttagagcatcaggcagttcga
attgagaatctggaactaatgtcacagcatggatgcaatgcctggaaagtatataatgaa
aatctagttcacatgattgaacatgcacagaaagagctccagaagttaaggaaacatatt
caagatttaaactggcagcgaaagaacatgcagctcacagctggatctaaattaagggaa
atggagtccacttgggtatccctggtcagtaagaattatgagattgaaaggactattgtg
caattagaaaatgaaatatttcaaatgaagcagcaacatggcgaggcaaacaaggaaaac
atccggcaagacttctaa

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