Vulpes lagopus (Arctic fox): 121491070
Help
Entry
121491070 CDS
T07435
Symbol
SHANK3
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 3 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
121491070 (SHANK3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
SAM_1
Ank
Ank_4
SAM_2
SH3_2
Ank_3
PDZ_6
Ank_5
SH3_9
PDZ
SH3_1
FERM_f0
Motif
Other DBs
NCBI-GeneID:
121491070
NCBI-ProteinID:
XP_041611409
LinkDB
All DBs
Position
5:complement(400401..449055)
Genome browser
AA seq
1811 aa
AA seq
DB search
MQLSRAAAAAAAAAPAQPSAQLPPAPAPAPAPPGPLPRGAADGAPAGGQGGPGRRAEPQR
APLPAASRPGSGPGAGAGMDGPGASAVVVRVGIPDLQQTKCLRLDPAAPVWAAKQRVLCA
LSHSLQDALNYGLFQPPSRGRAGKFLDEERLLQDYPPNLDTPLPYLEFRYKRRVYAQNLI
DDKQFAKLHTKANLKKFMDYVQLHSTDKVARLLDKGLDPNFHDPDSGECPLSLAAQLDNA
TDLLKVLRNGGAHLDFRTRDGLTAVHCATRRRNAAALTTLLDLGASPDYKDSRGLTPLYH
SALGGGDALCCELLLHDHAQLGTTDENGWQEIHQACRFGHVQHLEHLLFYGADMGAQNAS
GNTALHICALYNQESCARVLLFRGANKDVRNYNSQTAFQVAIIAGNFELAEVIKTHKDSD
VVPFRETPSYAKRRRLAGPSGLASPRPLQRSASDINLKGEVQPAASPGPSLRSLPHQLLL
QRLQEEKDRDRDGDQENDIGGPTAGRGSQSKISPSGPGGPGAPPGPGPAPPAPPAPPPRG
PKRKLYSAVPGRKFIAVKAHSPQGEGEIPLHRGEAVKVLSIGEGGFWEGTVKGRTGWFPA
DCVEEVQMRQYDTRHETREDRTKRLFRHYTVGSYDSLTSHSDYVIDDKVAVLQKRDHEGF
GFVLRGAKAETPIEEFTPTPAFPALQYLESVDVEGVAWRAGLRTGDFLIEVNGVNVVKVG
HKQVVALIRQGGNRLVMKVVSVTRKPEEDGARRRAPPPPKRAPSTTLTLRSKSMTAELEE
LASIRRRKGEKLDEILAAATEPTLRPDIADADSRAATVKQRPTSRRITPAEISSLFERQG
LPGPEKLPGSLRKGIPRTKSVGEDEKLASLLEGRFPRSTSMQDSMREGRGIPPPPQTAPP
PPPAPYYFDSGPPPAFSPPPPPGRAYDTVRSSFKPGLEARLGAGATGLYEAGAPLGPLPY
PERQKRARSMIILQDSAPEVGDVPRPPPAVTPPERPKRRPRPPGPDSPYANLGAFSASIF
APSKPQRRKSPLVKQLQVEDAQERAALAVGSPGPGGGSFAREPSPTHRGPRPGGLDYGPA
DSPGLAFGGPGPAKDRRLEERRRSTVFLSVGAIEGSPPSAELPSLQPSRSIDERLLGAGA
APTTGRDLLLPSPVSALKPLVSGPSLGPSGSTFIHPLTGKPLDPSSPLALALAARERALA
SQAPSRSPTPVHSPDADRPGPLFVDVQARDSERGALASPAFSPRSPAWVPVPARREPEKA
PREERKSPEDKKSMILSVLDTSLQRPAGLIVVHATSNGQEPSGLGAEEERPSTPELAPAP
PQSAVAAEPLASPRAQPPGSAPPTDPGPGQGSSEEEPELVFAVNLPPAQLSSSDEETREE
LARIGLVPPPEEFANGVLLATPLPGPGPSPTTVPGPASGKPSSEPPPAPESAADSGVEEA
DTRSSSDPHLETTSTISTVSSMSTLSSESGELTDTHTSFADGHTFLLEKPPVPPKPKLKS
PLGKGPVTFRDPLLKQSSDSELMAQQHHAASAGLASVAGPARPRYLFQRRSKLWGDPVES
RGLPGPEDDKPTVISELSSRLQQLNKDTRSLGEEPVGGLGGLLDPAKKSPIAAARLFSSL
GELSTISAQRSPGGPGGGASFPVRPGGRYPVARRAPSPVKPASLERVEGLGAGAGGAGRP
FGLTPPTILKSSSLSIPHEPKEVRFVVRSVSARSRSPSPSPLPSPAPGPGPGAPGPRRPF
QQKPLQLWSKFDVGDWLESIHLGEHRDRFEDHEIEGAHLPALTKDDFVELGVTRVGHRMN
IERALRQLDGS
NT seq
5436 nt
NT seq
+upstream
nt +downstream
nt
atgcagctgagccgcgccgccgccgccgccgccgccgccgcccctgcgcagccctcggct
cagctgccccccgcgcccgccccggccccggccccccccggccccctcccgcgcggcgcg
gccgacggggctccggcgggggggcagggggggccggggcgccgcgcggagccccagcgc
gccccgctcccggccgcgagccgcccgggctccggcccgggtgccggcgcggggatggac
ggccccggggccagcgcggtggtcgtgcgcgtcggcatcccggacctgcagcagacgaag
tgcctgcgtctggacccggccgcgcccgtgtgggccgccaagcagcgcgtgctgtgcgcc
ctcagccacagcctccaggacgcgctcaactacgggctcttccagccgccctcgcggggc
cgtgccggcaagttcctggacgaggagcggctcctgcaggactacccgcccaacctggac
acgcccctgccctacctggagtttcgatacaagaggcgagtgtacgcgcagaacctcatc
gatgataagcagtttgcaaagcttcacacaaaggcaaacctgaagaagttcatggattac
gtccagctgcacagcacggacaaggtggcccgcctactggacaaggggctggaccccaat
ttccacgatcctgactcaggagagtgtcctctgagccttgcggcccagctggacaacgcc
acggacctgctgaaggtgctgaggaacggcggtgcccacctggacttccgcactcgcgac
gggctgacggccgtgcactgtgccactcgccggcgcaacgcggcagccttgacgaccctg
ctggacctgggtgcctctcctgactacaaggacagccgcggcctgacgcccttgtaccac
agcgccctggggggtggggatgccctgtgctgtgagctgctgctgcacgaccacgctcag
ctggggaccacggatgagaacggctggcaggagatccaccaggcgtgccgctttgggcat
gtgcagcacctggagcatctgctgttctacggagctgacatgggggctcagaacgcctca
gggaacacggccctgcacatctgtgccctttataaccaggagagctgtgctcgcgtcctg
cttttccgcggagctaacaaggacgtccgcaattacaacagccagacagccttccaggtg
gccatcatcgcagggaactttgagctcgcagaggtcatcaagacccataaagactcagat
gttgtaccattcagggaaacccccagttatgcaaagcggcggcggctggctggccccagt
ggcctggcctcccctcggcccctgcagcgctcagccagtgacatcaacctgaagggtgag
gtgcaaccggcagcttctcctggaccttcgctgcgaagccttccccatcagctgctgctc
cagcggctgcaggaggagaaagaccgggatcgggatggtgaccaagaaaatgacatcggt
ggccccacagcaggcaggggcagccagagcaagatcagcccgagcgggcccggcggcccc
ggcgcgccccccggccccggccccgcgccccccgcgccccccgcgccgccgccgcggggc
ccgaagcggaaactttacagcgcggtccccggccgcaagttcatcgccgtgaaggcgcac
agcccgcagggcgagggcgagatcccgctgcaccgcggcgaggccgtcaaggtgctcagc
attggggagggcggtttctgggaggggaccgtgaaaggccgcacgggctggttcccggct
gactgcgtggaggaggtgcagatgaggcagtatgacacacggcatgaaacccgggaggac
cggacgaagcgccttttccgccactacacagtgggctcctatgacagcctcacctcacac
agtgattatgtcattgatgacaaggtggccgtcctacagaaacgggaccatgaaggcttt
ggttttgtgctccggggagccaaagcagagacccccatcgaggaattcacgcccacgccc
gccttccctgcgctccagtatcttgagtcggtggatgtggagggtgtggcctggagggcc
gggctgcgcacaggagacttcctcatcgaggtgaacggggtgaacgtggtgaaggttggc
cacaagcaggtggtggctctgatccgccagggcgggaaccgcctcgtcatgaaggttgtg
tctgtgacaaggaagcccgaagaggatggggctcggcgcagagccccaccgccccccaag
agggcccccagcaccacgttgactctgcgttccaagtccatgacggcagaacttgaggaa
cttgcctccattcggagaaggaaaggggagaagctggatgagatcctggccgctgccacg
gagccgaccctgaggccagacatcgcggatgccgactcaagagccgccactgtcaaacag
cggcccaccagtcggaggatcacccctgccgagatcagctctctgtttgagcgccagggc
ctcccaggcccagagaagctgcccggctccctgcggaaggggattccacggaccaagtct
gtaggggaggatgaaaagctggcgtccctcctggaggggcgcttcccgaggagcacgtcc
atgcaagattccatgcgcgagggccgaggcatcccgccacccccccagactgcaccgccc
cccccaccagccccctactacttcgactcggggccgccccccgccttctcgcctccgccg
cccccgggccgcgcctatgacactgtgcgctccagctttaagcccggcctggaggcgcgc
ctgggtgcaggggccacgggcctgtacgaggccggggcgcccctggggccgctgccctac
cctgagcggcagaagcgcgcgcgctccatgatcatcctgcaggactcggcgcccgaggtg
ggcgacgtcccgcggccaccgccggccgtcaccccgcctgagcggcctaagcggaggccg
cggccgccaggccccgacagcccgtacgccaacctgggcgccttcagcgccagcatcttc
gcaccctccaagccccagcgccgcaagagccccctggtgaagcagcttcaggtggaggac
gcccaggagcgcgcggccctggccgtcggcagccccggcccgggtggtggcagctttgcc
cgcgagccctccccgacgcaccgcggccctcggcccggcgggctcgactacggccccgct
gacagccccggcctggctttcggcggcccggggccggccaaggaccggcggctggaggag
cggcgccgctccaccgtgttcctatcggtgggagccatcgagggcagccccccgagcgct
gagctgccctccctgcagccctcccgctccatcgacgagcgccttctgggcgccggcgcc
gcccccaccaccggccgcgacctgctcctgccctcccccgtctctgctctgaagccattg
gtgagcggcccgagccttgggccttcaggctccaccttcatccacccgctcaccggcaag
cccctggaccccagctcgcccctggccctggccctggccgcgcgggagcgggctctggcc
tcccaggcgccctcccggtcccccacgcctgtgcacagccccgacgctgaccgtcccggg
cctctatttgtggatgtgcaggcccgcgactccgagcgaggggccctggcctccccagcc
ttctccccaagaagtccagcctgggtccctgtgcctgctcgcagggagccggagaaagca
ccccgggaggagcggaagtcgccggaggacaagaagtccatgatcctcagtgtcctggac
acgtctctgcagcggccggctggtctcatcgtcgtgcatgccaccagcaacgggcaggag
cccagcgggctgggggctgaagaggagcggccgagcaccccggagctggcccccgcccct
ccacagtcggcagtggcggcggagcccctggctagcccccgggcgcagcctcctggcagc
gccccgccgacagaccccgggccgggccagggcagctcggaggaggagccagagctggtg
tttgccgtgaacttgccgcccgcccagctgtcctccagtgatgaggagaccagggaggag
ctggcccgcattgggctggtgccgcctcctgaagagtttgccaacggggtcctgctggcc
accccccttcctggtccaggtccctcgcccaccacggtgccaggcccggcctcagggaag
ccgagcagcgagcccccgcctgcgcctgagtctgcagctgactcaggggtggaggaggcc
gacacgcgcagctccagcgacccccacctggagaccacaagcacgatctccacggtgtcc
agcatgtccacgctgagctcagagagtggggaactcactgacactcacacctccttcgcc
gatggacacacttttctactcgagaagccaccagtgcctcccaagcccaagctcaagtcc
ccgctggggaaggggccggtgaccttcagggacccgctgctgaagcagtcctcggacagc
gagctcatggcccagcagcaccacgccgcctctgctgggttggcctctgttgccggacct
gctcgccctcgctacctcttccagagaaggtccaagctgtggggggaccccgtggagagc
cgggggctccctgggcccgaagatgacaaaccaactgtgatcagtgagctcagctcccgc
ctgcagcagctgaacaaagacacacgctccttgggggaagagccggtcggtggcctgggc
ggcctgctggaccctgccaagaagtcgcccatcgcggcagctcggctcttcagcagcctc
ggtgagctgagcaccatctcagcgcagcgcagccccgggggcccgggcggcggggcctcg
ttcccggtgcggcccggcggccgctaccccgtggcaaggcgcgccccgagcccggtgaag
cccgcgtcgctggagcgggtggaggggctgggggcgggcgcggggggcgcggggcggccc
ttcggcctcacgccccccaccatcctcaagtcgtccagcctctccatcccgcacgagccc
aaggaggtgcgcttcgtggtgcgcagcgtgagcgcgcgcagccgctcgccctcgccgtcg
ccgctgccctcgcccgcgcccggccccggccccggggcgcccggcccgcgccggcccttc
cagcagaagccgctgcagctctggagcaagttcgacgtgggcgactggctggagagcatc
cacctgggcgagcaccgcgaccgcttcgaggaccacgaaatcgagggcgcgcacctgccg
gcgctcaccaaggacgacttcgtggagctgggcgtcacgcgcgtgggccaccgcatgaac
atcgagcgcgcgctcaggcagctggacggcagctga
DBGET
integrated database retrieval system
