Vulpes lagopus (Arctic fox): 121491110
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Entry
121491110 CDS
T07435
Symbol
SMG7
Name
(RefSeq) protein SMG7 isoform X1
KO
K14409
protein SMG7
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121491110 (SMG7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vlg03019
]
121491110 (SMG7)
Messenger RNA biogenesis [BR:
vlg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
121491110 (SMG7)
mRNA cycle factors
Common to processing body (P body) and stress granule
121491110 (SMG7)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
121491110
NCBI-ProteinID:
XP_041611507
LinkDB
All DBs
Position
1:complement(169264440..169359276)
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AA seq
1215 aa
AA seq
DB search
MRNWMFLQIVIVGENVSYKSQMRTGNLKSEEHLKSSNIRQAEVLKADMTDSKLGPAEVWT
SRQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANL
SLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYIC
QHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCR
SIAVKFPFPAASTNLQKALSKALESRDEVKTKWGVSDFIKAFIKFHGHVYLSKSLEKLSP
LREKLEEQFKRLLFQKAFNSQQLVHVTVINLFQLHHLRDFSNETEQHSYSQDEQLCWTQL
LALFMSFLGILCKCPLQNKSQEESYNAYPLPAVKVSMDWLRLRPRVFQEAVVDERQYIWP
WLISLLNSFHPHEEDLSSTNATPLPEEFELQGFLALRPSFRNLDFSKGHQGITGDKEGQQ
RQIRQQRLISIGKWIADNQPRLIQCENEVGKLLFITEIPELTLEDPSEAKENLILPETSM
IESLSADGNPGLKSVLSTGRNLSNNCDPGEKPMVTFKENIKPREVNRDQGRSFPPKEVRR
DYSKGITVTKNDGKKDNSKRKTETKKCTLEKLQETGKQSVAVQVKSQTELRKTPVSEARK
TPVTQTPSQATNSQFIPIHHPGAFPPLPSRPGFPPPTYVIPPPVAFSMGSGYTFPAGVSV
PGTFLQPTAHSPAGNQVQAGKQSHIPYSQQRPSGPGPMNQGPQQPQPPSQQPLTSLPAQP
TAQSTSQLQVQALAQQQSPTKAVPALGKSPPHHSGFQQYQQADASKQLWNPPQVQGPLGK
IMPVKQPYYLQSQDPIKLFEPSLQPPVMQQQPLEKKMKPFPMEPYNHNPSEVKVPEFYWD
SSYSMADNRAVMAQQANMDRRGKRSPGVFRPEQDPVPRMPFEDPKGSPLLPPDLLKSLAA
LEEEEELIFSNPPDLYPALLGPLASLPGRSLFKSLLEKPSELMSHSSSFLSLTGFSLNQE
RYPNNSVFNEVYGKNLTTSSKTELNPSLAPQETSLYSLFEGTPWSPSLPASSDHSTPASQ
SPHSSNPSSLPSSPPTHNHNSVPFSNFGPIGTPDNRDRRTADRWKTDKPAMGGFGIDYLS
ATSSSESSWHQASTASGTWTGHGPSMEDSSAVLMESLKSIWSSSMMHPGPSALEQLLMQQ
KQKQQRGQGTMNPPH
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgagaaattggatgttcttgcagatagtcattgtgggagaaaacgtttcatataagtcc
cagatgaggaccggaaacttgaaatcagaggagcatctgaaatcaagtaatattaggcag
gcagaagtcctgaaggctgatatgacagattctaagctgggtccagccgaggtctggaca
tccaggcaggctctgcaggacctgtaccagaaaatgctagttactgatttggaatacgct
ttagacaagaaagtagaacaggatctctggaatcatgcctttaagaatcagatcacaaca
ctacaaggccaggcaaagaatcgagcaaacccgaatcggagtgaagttcaggcaaacctt
tctctgttcctagaggcagctagtggcttctatactcagttattacaagaactgtgtaca
gtgtttaatgtagatttaccatgccgtgtgaagtcttcccaattgggaattatcagcaat
aaacagacgcataccagcgccatagtgaagccacagtctagctcctgttcttatatctgc
cagcactgcctcgtccaccttggagacattgctcgatacagaaaccagaccagccaggca
gagtcctactataggcatgcagctcagcttgtcccctctaatggtcagccttacaatcag
ttggctatcttagcttcttccaaaggagaccatctgaccacaattttctactactgcaga
agcatcgctgtgaagttccctttcccagctgcctccacgaatctacaaaaagcactttct
aaagcactggaaagccgggatgaggtgaaaaccaaatggggtgtttctgacttcatcaag
gcctttattaaattccacggtcatgtgtacctgagtaagagcttggaaaagctgagccct
cttcgagagaaattggaagaacagtttaagaggctgctattccaaaaagctttcaactct
cagcagttagttcacgtcactgtcattaacctgtttcaacttcatcaccttcgtgacttt
agcaatgaaacggagcagcatagttatagccaagatgagcagctgtgttggacacagtta
ctggccctctttatgtcttttcttggcatcctgtgcaagtgtcctctccagaacaagtct
caggaggagtcctacaatgcctatcctcttcctgcagtcaaggtctccatggactggctg
agactcagacccagggtctttcaggaggcagtggtagatgaaagacagtacatttggccc
tggctaatttctcttctaaatagtttccatccccatgaagaggatctttcaagtactaat
gctacaccacttccagaggagtttgaattacaaggattcttggctttgagaccttctttc
aggaacttggatttttccaaaggccatcagggtattacaggagacaaagaaggtcagcaa
cgacaaatacgacagcagcgcttgatctctataggcaagtggatcgccgataatcagcca
aggctgattcagtgtgaaaatgaggtagggaaattgttgtttatcacagaaatcccagag
ttaacactagaagaccccagtgaagccaaagagaacctcattctgccagaaacatccatg
atagagtcactatctgcagacgggaacccaggactgaaatcagtgctgtccacgggccgt
aatctaagcaacaactgtgaccccggagagaaacctatggtcaccttcaaagagaacatt
aagccgcgagaagtgaacagagaccaaggaagaagttttcctcccaaagaggtgagaagg
gactatagcaaaggaattactgtaactaagaatgatggaaagaaggacaacagcaagagg
aaaacagaaaccaagaaatgcaccttagaaaagttacaggaaacaggaaagcagagtgtg
gcagtgcaggtaaaatcccagacagaattaagaaagactccagtgtctgaagccaggaaa
acccctgtaactcaaaccccaagtcaagcaactaactcccagttcatccccattcatcac
cctggagccttccctcctcttcccagccggccagggttcccgccccctacatatgttatt
ccccctcctgtggcattttctatgggctcaggttacaccttcccagctggtgtttctgtc
ccaggaacctttcttcagcctacagctcactctccagcaggaaaccaggtgcaagctggg
aaacagtcccacattccttacagccagcaacggccctctggaccagggccaatgaaccag
ggacctcaacaaccacagccaccttcccagcaaccccttacatctttaccagctcagcca
acagcacagtctacaagccagttgcaggttcaagctctagctcagcaacaatcccccaca
aaagctgtgccggctttggggaaaagccctcctcaccactctggattccagcagtatcaa
caggcagatgcctccaaacagctgtggaatccccctcaggttcaaggcccattagggaaa
atcatgcctgtgaaacagccctactaccttcagtcccaagaccccataaaactgtttgag
ccgtcattgcaacctccggtaatgcagcagcagcctctagagaaaaaaatgaagcctttt
cccatggagccatataaccataatccctcagaagtcaaggtcccagaattctactgggat
tcttcgtacagcatggctgataacagagctgtaatggcacagcaagcaaatatggaccgc
aggggcaaacggtcaccaggagtcttccgtccagagcaggatcctgtgcccaggatgcca
tttgaggaccccaagggctcccctctgcttcctccggacctgttaaagagtctggctgcc
ttggaggaagaggaagagctgattttttctaaccctcctgatctttacccagctctgctg
gggcctctcgcctctcttcctggacggagcctctttaaatccttgttggagaagccctcg
gagctcatgtcccattcctcctctttcttgtccctcaccggattctctctcaatcaggaa
agatacccaaataacagtgtgtttaatgaggtatatgggaaaaacctgacaaccagctcc
aaaacagaacttaatccttcactggccccccaggagacgtcactctactccctctttgaa
gggaccccctggtctccatcacttcctgccagttcagatcattcaacaccagccagccag
tctcctcattcctctaacccaagcagcctgccaagctcccctccaacacacaaccataat
tctgttccattctccaactttggacccattgggactccagataacagggataggagaacc
gcagatcggtggaaaaccgataagccagccatgggtgggtttggaattgactatctctca
gcaacatcatcctctgagagcagttggcatcaggccagcactgcaagtggcacctggaca
ggccacggcccctccatggaggattcctctgctgtcctcatggaaagcctcaagtctatc
tggtccagttccatgatgcatcctggaccttccgctctggagcagctgttaatgcagcag
aagcagaagcagcagcggggacaaggcaccatgaaccctccacactga
DBGET
integrated database retrieval system
