Vulpes lagopus (Arctic fox): 121491197
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Entry
121491197 CDS
T07435
Symbol
VPS54
Name
(RefSeq) vacuolar protein sorting-associated protein 54 isoform X1
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
vlg
Vulpes lagopus (Arctic fox)
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vlg01009
]
121491197 (VPS54)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vlg04131
]
121491197 (VPS54)
Protein phosphatases and associated proteins [BR:
vlg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121491197 (VPS54)
Membrane trafficking [BR:
vlg04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
121491197 (VPS54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
SBP_bac_6
YqzH
EXOC6_Sec15_N
Motif
Other DBs
NCBI-GeneID:
121491197
NCBI-ProteinID:
XP_041611696
LinkDB
All DBs
Position
5:complement(47647259..47724178)
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AA seq
977 aa
AA seq
DB search
MASSHSSSPVPQGSSSDVFFKKEVDPTKHIRPVQSLPDVCPKEPTGDSNSLCVAPSLVTD
QHRWTVYHSKVNLPAALNDPRLAKRESDFFTKTWGLDFVDTEVIPSFYLPQISKEHFTVY
QQEISQREKIHERCKNICPPKDTFDRTLLHTHDKSRTDLEQVPKIFMKPDFALDDSLTFN
SVLPWSHFNTAGGKGNRDAASSKLLQEKLSHYLDIVEVNIAHQISLRSEAFFHAMTSQHE
LQDYLKKTSQAVKMLRDKIAQIDKVMCEGSLHILRLALTRNNCVKVYNKLKLMATVHQTQ
PTVQVLLSTSEFVGALDLIATTQEVLQQELQGIHSFRHLGSQLCELEKLIDKMMIAEFST
YSHSDLNRPLEDDCQILEEERLVSLVFGLLKQRKLNFLEIYSEEMIITAKNIIKQCVINK
VSQIEEIDTDIVMKLADQMRMLNFPQWFDLLKDIFSKFTIFLQRVKATLNIIHSVVLSVL
DKNRRTRELEEISQQKNVTKDNSLDTEVAYLIHEGMFISDAFNESELTPIAIDTTSQRNA
SPNSEPCSSDSVSEPECTTDSSSSKEQTSSSATPGGVDIMVNEDMKLTDLELEKLANNIQ
ELLYSASDICHDRAVKFLMSRAKDGFLEKLNSTEFITLSRLMETFILDTEQICGRKSMSL
LGALQSQANKFVNRFHEERKTKLSLLLDNERWKQADVPAEFQDLVDSISGGKIALPEKKL
GATEERKPAEVLIVEGQQYAVVGTVLLLIRIILEYCQCVDNIPSVTTDMLTRLSDLLKYF
NSRSCQLVLGAGALQVVGLKTITTKNLALSSRCLQLIVHYIPVIRAHFEARLQPKQYSML
RHFDHITKDYHDHIAEISAKLVAIMDSLFDKLLSKYEVKAPVPSACFRNICKQMAKMHEA
IFDLLPEEQTQMLFLRINASYKLHLKKQLSHLNVINDGGPQNGLVTADVAFYTGNLQALK
GLKDLDLNMSEIWEQKR
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaagccacagttcttcaccagtgcctcaaggaagcagcagtgatgttttcttt
aaaaaagaggtagatccaacaaaacacattcgacctgtgcagtcactgccagacgtatgt
cccaaggaacccacaggtgattcaaatagtttatgtgttgccccatctctagttacagat
caacatagatggactgtatatcattccaaagtaaacctcccagcagcattaaatgatcct
agattagcaaaaagagaatctgacttcttcacaaaaacatggggattggactttgtggac
actgaagtcataccttcattctacctcccacagatcagcaaggaacattttacagtgtat
caacaggaaatctctcagagagagaagattcatgagagatgcaagaatatttgtcctcct
aaagatacctttgacaggactctcttacatactcatgataaatccaggacagatctggag
caagtacctaagatttttatgaaaccagattttgccttggacgattccttaacttttaat
tcagttttaccatggtctcattttaatactgctggtggaaaaggaaatcgtgatgcagct
tcctcaaagttgctacaagaaaagctgagccattatctggatattgtggaagtaaacatt
gctcaccagatctctctacgttccgaagcattttttcatgcaatgacctctcaacacgaa
ttgcaggactacctcaagaaaacttcccaggctgtaaagatgcttcgagataagattgca
cagattgataaagtaatgtgtgaaggatcactacacattttaagactggcacttaccaga
aacaattgtgtgaaagtgtacaataaactcaagttaatggccactgtacaccagactcag
cctacagtacaggtgttgttatccacttctgaatttgttggagcattggacttaatagca
acaacacaagaggttctacagcaggaacttcagggcattcacagcttccggcatttggga
tcacaactttgtgaattagaaaaactgatagataaaatgatgattgcagaattttctact
tattctcacagtgacttaaacagaccactggaagacgattgtcaaattttagaagaggaa
aggcttgtatctcttgtatttggacttttaaaacaaagaaaacttaattttttagaaatc
tatagtgaagaaatgattattacagcaaagaatatcattaaacagtgtgtgattaataaa
gtatcacaaatagaagaaattgacacagatattgttatgaagcttgcagatcagatgaga
atgttgaattttcctcagtggtttgatttgctaaaggatattttctctaagtttacaatt
ttcctacaaagagttaaggcaacgttaaatatcattcacagtgttgttctctcagttctc
gacaaaaaccgaaggaccagagaattggaggagatttcacaacagaagaatgttacaaaa
gacaattcactggacacagaggttgcttatttaatccatgaaggcatgtttataagtgat
gcattcaatgagagtgaattaacacctatagcaattgatactacctctcaaagaaatgca
tctccaaatagtgagccctgcagcagtgattcggtatccgaaccagaatgtactactgat
tcttcatccagcaaagagcagacatcatcatctgctacgccaggaggtgtggatattatg
gtcaatgaagacatgaaattaactgatttagagctagaaaaactggcaaataatatccag
gaattattgtatagtgcctcagatatatgccatgatcgagctgttaaatttctcatgtca
agagcaaaggatggttttcttgagaagctaaattccacggaattcataacactttctaga
ttaatggaaacattcattttagatactgaacagatctgtggaagaaaaagtatgtcatta
cttggagcacttcagagccaagctaataaatttgtaaacagatttcatgaagagagaaaa
actaagctcagcctcctcttagacaatgagcgctggaagcaagctgatgttcctgcagaa
tttcaggatcttgttgattctatatcaggtggaaagattgctttacctgaaaaaaagtta
ggggctacagaagaaaggaaaccagctgaagttctcattgttgagggacaacagtatgct
gtcgttggaactgtattgctcttgataagaattatccttgaatattgccagtgtgtggac
aatatcccatctgttactactgacatgcttacacgtctgtcagatttattgaagtacttc
aattcaagaagttgccagttagttcttggagctggtgcactgcaagttgttggactaaaa
acaataacgacaaaaaatttggctctttcttcacgttgtttgcagttaattgtgcactac
attcctgtgatccgggctcattttgaagctcggctgcagcctaagcaatatagcatgctt
aggcattttgatcatatcactaaggactaccatgaccacatagctgaaatatcagctaag
cttgtagcgataatggatagcttatttgacaagctattatctaagtatgaggtgaaagct
cccgttccttctgcctgtttcaggaatatttgtaagcaaatggcaaaaatgcatgaagct
atatttgatcttcttccagaagaacaaacacaaatgttatttttaagaattaatgcaagt
tataaactccacttgaaaaagcagttatctcatttaaatgtgataaatgatggaggacct
caaaatgggttggtcacagcagatgtagctttttacactggaaatcttcaagccttaaaa
ggtcttaaagatttggacctaaatatgtccgagatctgggaacagaagaggtga
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