Vulpes lagopus (Arctic fox): 121491498
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Entry
121491498 CDS
T07435
Symbol
SPAST
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
vlg
Vulpes lagopus (Arctic fox)
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vlg04131
]
121491498 (SPAST)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
vlg04812
]
121491498 (SPAST)
Enzymes [BR:
vlg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
121491498 (SPAST)
Membrane trafficking [BR:
vlg04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
121491498 (SPAST)
Cytoskeleton proteins [BR:
vlg04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
121491498 (SPAST)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
RuvB_N
AAA_22
AAA_5
TIP49
AAA_14
Mg_chelatase
AAA_16
MIT
IstB_IS21
DUF815
AAA_24
nSTAND3
NPHP3_N
AAA_2
DUF4368
DUF2515
Motif
Other DBs
NCBI-GeneID:
121491498
NCBI-ProteinID:
XP_041612410
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All DBs
Position
5:complement(108510397..108564583)
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AA seq
618 aa
AA seq
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MSSPGGRGKKKGSGGGGGSSPVPPRPPPPCLAPARPAPRPAPPPESPHKRNLYYFSYPLF
LGFALLRLVAFHLGLLFVWLCQRFSRALMAAKRSSRAAPAPASASPPAPVPGGEAERVRA
FHKQAFEYISVALRIDEDEKAGQKEQAVEWYKKGIEELEKGIAVIVTGQGEQYERARRLQ
AKMMTNLVMAKDRLQLLEKLQPVLQFSKSQTDVYNDSTNLTCRNGHLQSESGAVPKRKDP
LTHTSNSLPRSKTVMKTGSTGLSGHHRAPSCSGLSMVSGVRQGPGPVTGTHKSTPKTNRT
NKPSTPTTAARKKKDLKNFRNVDSNLANLIMNEIVDNGTAVKFDDIAGQELAKQALQEIV
ILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGE
GEKLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDD
RVLVMGATNRPQELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLA
RMTDGYSGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIRLSDFTESLKKIKRSVSP
QTLEAYIRWNKDFGDTTV
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgagttctccgggtggacgagggaagaagaaaggctccggcggcggcggcggcagcagc
ccggtgcctcccaggcctccgcccccctgcctggcgcccgcccgtcccgcccccaggccg
gcccccccgcccgagtctccgcataagcggaacctgtactacttctcctacccgctgttc
ctgggcttcgcgctgctgcgcctggtcgccttccacctggggctcctcttcgtgtggctc
tgccagcgcttctcccgcgccctcatggctgccaagaggagctcccgggccgcgccggcg
ccggcctcggcctcgccccccgcgccggtgccgggcggggaggccgagcgcgtccgagcc
ttccacaagcaggccttcgagtacatctccgttgccctgcgcatcgatgaggacgagaaa
gcaggacaaaaagagcaagctgtggaatggtataagaaaggtattgaagaactagaaaaa
ggaatagctgtcatagttacaggacaaggtgaacagtatgaaagagctagacgccttcaa
gctaaaatgatgactaatttggttatggccaaggaccgtttacaacttctagagaagctg
caaccagttttgcaattttccaagtcacaaacggatgtctataatgacagtactaacttg
acatgccgaaacggacatctccagtcagaaagtggagctgttccaaagagaaaagatccc
ttaacacacactagtaattcactgcctcgttcaaaaacagttatgaagactggatccaca
ggtttgtcaggccaccacagagcacctagttgtagtggcttatccatggtttctggagtg
agacagggacctggtcctgtaactggaactcataagagtacaccaaaaacaaatagaaca
aataagccttctacccctacaactgctgctcgtaaaaagaaagacttgaagaattttagg
aatgtggacagcaatcttgctaaccttataatgaacgaaattgtggacaatggaacagct
gttaaatttgatgatatagctgggcaagaattggcaaaacaagccttgcaagaaattgtt
attcttccttctctgaggcctgagttgttcacagggcttagagctcctgccagaggattg
ttactctttggtccacctggaaatgggaaaacaatgctggctaaagcagtagctgcagaa
tccaatgcaaccttctttaatataagtgctgcaagtttaacttcaaaatatgtgggagaa
ggagagaaattggtgagagctctttttgctgtggctcgagaacttcagccttctataatt
tttatagatgaagttgatagccttttgtgtgaaagaagagaaggagagcatgatgctagt
agacgtctaaaaactgaatttctaatagaatttgatggtgtacaatctgctggagatgac
agagtgcttgtaatgggtgcaactaataggccacaagagcttgatgaggctgttctcagg
cgtttcatcaaacgggtatatgtgtctttgccaaatgaggagacacgactacttttactt
aaaaatctattatgtaaacaaggaagcccattgacccaaaaagaactagcacaacttgct
agaatgactgatgggtattcaggaagtgatctaacagctttggcaaaagatgcagcattg
ggtcctatccgagaactgaaaccagaacaagtaaagaatatgtctgccagtgagatgaga
aatattcgattatctgacttcactgaatccttgaaaaagataaagcgcagcgtgagccct
caaaccttagaagcatacatacgttggaacaaggactttggcgataccactgtttaa
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