Vulpes lagopus (Arctic fox): 121491654
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Entry
121491654 CDS
T07435
Symbol
USP39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2 isoform X1
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121491654 (USP39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vlg03041
]
121491654 (USP39)
Spliceosome [BR:
vlg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
121491654 (USP39)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
121491654
NCBI-ProteinID:
XP_041612695
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Position
5:94579502..94609683
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AA seq
563 aa
AA seq
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MSGRSKRESRGSTRGKRESESRGSSGRVKREREREAEAPSSRGSPVRVKREVEPVSAREA
PTPVVPAVRVKREREVDEDSEPEREVRAKNGRVDSEDRRSRHCPYLDTINRSVLDFDFEK
LCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEII
DSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQA
LSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQA
VVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPH
PDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKF
NGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLRE
YLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQMI
TLSEAYIQIWKRRDNDETNQQGA
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggcgatccaagcgtgaatctcgtggttctacccgcgggaagcgcgagtccgag
tcgcggggcagctcgggccgcgtcaagcgggagcgggagcgggaagccgaggcgccgagc
tcccggggcagtccagtgcgtgtgaagcgggaggtcgagccggtgagcgcgcgcgaggct
ccgacgccagtcgtcccggctgtgcgggtgaagcgggagcgcgaggtggacgaggactct
gagcctgagcgggaggtgcgagcaaagaatggccgtgtggattctgaggatcggaggagc
cgccattgcccgtacttggataccattaacaggagtgtgctggactttgactttgagaaa
ctatgttccatctccctctcacatatcaatgcatatgcctgtctggtgtgtggcaagtac
tttcagggccgaggtttgaagtctcacgcctatattcacagtgtccagtttagccatcat
gtcttcctcaacctccacactctcaagttttactgccttccagacaactatgagatcatc
gattcttccctggaggatatcacatatgttttgaagcccactttcacaaagcagcagatt
gcaaacttggacaagcaagccaaactctcccgggcatatgatggtactacttacctgcca
ggtattgtgggcctgaataacataaaggccaacgactacgccaacgctgtccttcaggct
ttatctaatgttcctcctctacggaactacttcttagaagaagataattataagaacatc
aagcgtcctccgggggatatcatgttcttgttggtccagcgttttggagagctgatgaga
aagctctggaaccctcgaaatttcaaggcgcatgtctctccccatgagatgcttcaagct
gttgtcctttgcagcaagaagacttttcagatcaccaagcaaggggatggagttgacttc
ctgtcctggtttctgaatgctctgcactcagctctggggggtacaaagaagaaaaagaag
actattgtgactgatgttttccaggggtctatgaggatcttcaccaaaaagcttcctcat
cctgatctgccagcagaagaaaaagagcagctgctgcataatgatgaataccaggagaca
atggtggagtccaccttcatgtacctgacactcgatctccctactgctcccctctacaag
gatgagaaggagcagctcattatccctcaggtgccgctcttcaacatcctggccaagttc
aacggtatcactgagaaggaatataagacctacaaggaaaactttctaaagcgcttccag
ctcaccaagctccctccatatctcatcttttgtattaagagattcactaaaaacaatttc
tttgtggagaagaatccaactattgtcaacttccctattacaaatgtggatctgagagaa
tacttgtctgaagaagtacaagcagtgcacaagaatactacctatgacctcattgccaac
attgtacacgacggcaagccctcggagggctcctaccggatccacgtgcttcatcacggg
acgggcaaatggtatgaattacaagacttgcaggtgactgacatccttccccagatgatc
acgctctcggaggcttatattcagatttggaagaggcgagataatgatgaaaccaaccag
cagggggcttga
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