Vulpes lagopus (Arctic fox): 121492894
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Entry
121492894 CDS
T07435
Symbol
ACIN1
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg03013
Nucleocytoplasmic transport
vlg03015
mRNA surveillance pathway
vlg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121492894 (ACIN1)
09122 Translation
03013 Nucleocytoplasmic transport
121492894 (ACIN1)
03015 mRNA surveillance pathway
121492894 (ACIN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vlg03019
]
121492894 (ACIN1)
03041 Spliceosome [BR:
vlg03041
]
121492894 (ACIN1)
Messenger RNA biogenesis [BR:
vlg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
121492894 (ACIN1)
Spliceosome [BR:
vlg03041
]
Complex C
Other components
EJC/TREX
121492894 (ACIN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_ACIN1
RSB_motif
SAP
RRM_1
Motif
Other DBs
NCBI-GeneID:
121492894
NCBI-ProteinID:
XP_041614090
LinkDB
All DBs
Position
6:70433771..70469760
Genome browser
AA seq
1336 aa
AA seq
DB search
MWRRKHPSSSGGTRGVLSGNRGVDYGSGRGQLGTFQGRWRKLPKMPEAVGTDPSTSRKMA
ELEEVTLDGKPLQALRVTDLKAALEQRGLAKSGQKSALVKRLKGALMLENLQKHSTPHAA
FQPNSQIGEEMSQNSFIKQYLEKQQELLRQRLEREAREAAELEEASAESEDEMIHPEGVA
SLLPPDFQSSLERPELELSRHSPRKSSSISEEKGESDDDKPRKGERRSSRVRQARAAKLS
ECSQVTEEEEDQETPSRNLRVRADRNLKTEEEEEEEEEEEEEEEEGQKSRDAPPVLKQFK
EAEEGEEMPRVKPEEVIDERHQSIRSPEQEELERGGRVTRSQEEARRSHVARYQQEKEMK
TVSSLEEEKQTKISKGLEEKSKSPSPPRLTEDLEKAPLVLQPEQNVGEEETPPPLLIKEA
SSPPPNTQLQSEEEIEPMEGPAPPVLTQLSPPNTDGEARELLISPHTVQLVGRLSPLSSP
ADTKAESLAEKVPEESVLPLVQKSTLAECSTQKGLETESEKYVQPFPFKIEELAPAKGIT
EESLKQLSLEQKEGRRASHTLLPSHRLKQSADSSSSRSSSSSSSSRSRSRSPDSSGSQSH
SSLRSKQRDVSRARTHTNPRGRSEMGSRSTSESRSRSRSRSRSASSNSRKSLSPGISRDS
STSYTETKDPSSGQEVATPPVPQLQVLEPKERTSTSSSIQVRRLSQPEPAEKHVTQRLQP
ERGSPKKCEAEEAEPPAATQPQTSETQTAHLPESERIHHTVEEKEEVTMDTSENRPENEV
PEPPVPIADQVSNDDRPEGSAEDEEKKESSMPKSFKRKISVVSATKGVPAGNSDTEGGQP
GRKRRWGASTATTQKKPSISITTESLKSLIPDIKPLAGQEAIVDLHADDSRISEDETERN
GDDGAHDKGLKICRTVTQVVPAEGQENGQREEEEEEKEPEAEPPIPPQVSVEVALPPPVE
HEVKKVTLGDTLTRRSISQQKSGVSITIDDPVRTAQVPSPPRGKISNIVHISNLVRPFTL
GQLKELLGRTGTLVEEAFWIDKIKSHCFVTYSTVEEAVATRTALHGVKWPQSNPKFLCAD
YAEQDELDYHRGLLVDRPSETKTEEQGVPRPLHPPPPPPAQPPQHPRAEQREQERAVREQ
WAEREREMERRERTRSEREWDRDKVREGPRSRSRSRDRRRKERAKSKEKKSEKKEKAQEE
PPAKLLDDLFRKTKAAPCIYWLPLTDSQIVQKEAERAERAKEREKRRKEQEEEEQKEREK
EAERERTRQLEREKRREHSRERDRERERERERDRGDRDRDRERDRERGRERDRRETKRHS
RSRSRSTPVRDRGGRR
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atgtggagacggaaacacccgagcagttccggaggaacccggggagttttgagtggtaat
cgaggggttgactatggcagtgggcggggtcaactcggtacgttccaagggcgttggcgg
aaattaccgaagatgcccgaagccgtcgggacggacccgagtacctcacgcaagatggcg
gagctggaggaggtgactctggacgggaagcctcttcaggcgctgcgggtgaccgacctg
aaggccgcactggagcagcgaggcctagcgaagagcgggcagaagagcgccctggtcaag
cggctcaaaggggctctaatgctagaaaatttacagaaacactcaacaccccatgctgca
ttccagccaaattcccagattggcgaggaaatgagccagaacagttttataaagcagtat
ctggaaaagcagcaggagcttcttaggcagcgtctggaacgtgaagcccgagaagctgca
gaacttgaagaagcttcagctgagtcggaggacgagatgatccatcctgagggagtggct
tccctgctgcctcctgactttcagagcagcctggagagaccagagctggaactcagcaga
cattcgcccagaaaaagctcctctatttctgaagagaaaggtgaatctgatgatgataaa
ccaaggaaaggagaaagacgatcatccagggtcagacaggcaagagcagctaaactctct
gagtgtagccaggtgaccgaggaggaagaggatcaagaaacaccttccagaaatctgagg
gtcagagcagatcgaaatttgaaaacagaggaggaagaagaggaggaggaggaagaggaa
gaagaggaagaggagggacaaaaatctagggatgcaccacctgtcctgaaacagtttaag
gaagcagaagagggggaagagatgcccagagtaaaaccagaggaggtgatagatgagaga
caccaaagcataagatccccggaacaggaggagctagagagaggaggaagagttacaagg
tcccaggaagaagcgagaagaagtcatgtggccagatatcagcaggaaaaagagatgaaa
acagtttcttcccttgaagaagaaaaacaaacaaaaatttcaaaaggcttggaggaaaaa
tcaaagtccccttcccctcctcgactgactgaagatctggagaaggctcctcttgtgcta
caaccagagcaaaatgttggtgaagaggaaactcctccgcctttacttatcaaggaagca
tcttcaccaccacctaatacacaactccagagtgaagaagaaatagagcccatggaaggc
ccagctccccctgtcctcactcagctatctcctcctaatacagatggtgaggccagggag
ctattaatatctccacatactgttcagttggtgggacgcctgtctcctttgtcaagtcct
gcagacaccaaagcagaatctctagcagagaaagtgccagaggagagtgtcctgcctcta
gttcagaaaagcacactagctgaatgctcaacccagaagggtcttgaaactgagtccgaa
aaatatgttcagccattcccttttaaaattgaggaattagcaccagccaaagggatcacc
gaggaatctctgaaacagctgtctttggaacagaaggaaggtagaagggcttctcatact
cttcttccaagccacagattgaaacagtcagctgactcatcctcaagccgatcctcctct
tcatcctccagttctagatcaagatctcgctctccggacagctcaggctctcagtctcac
tcatctctaagatccaagcagagagatgtatctcgggcacgtactcataccaaccctcgt
ggtagatctgagatgggctcccgatcaacatcagagtctaggtcacgttcccgttcccgt
tctcgttcagcttcaagcaacagcagaaaatctctgagccctggaatctccagggacagc
agcaccagctacactgaaaccaaagatccctcttctgggcaggaggttgcaactccacct
gtgccacaactgcaggtccttgagccaaaggagaggacttccacctcatcctctatccaa
gtgaggcgtttgagccaacctgagccagctgaaaagcatgtgacccagaggttacaacct
gagcgggggagcccaaagaagtgtgaagctgaagaggcagagccaccagctgccacacag
ccccaaacctcagagacccagactgctcacctacctgaatcagaaaggattcatcacact
gttgaggagaaggaggaagtgaccatggacacaagtgaaaacagacctgaaaatgaggtt
ccagaaccccccgtgcctattgcagaccaagtcagcaatgatgaccgcccagagggcagt
gctgaagatgaggagaagaaagagagctcgatgcccaaatcattcaagaggaagatctcc
gttgtctcagctaccaagggggtgccagctggaaacagtgacacagaggggggccagcct
ggccggaagcggcgttggggagccagcacagccaccacacagaagaaaccctccatcagt
atcaccaccgaatcactcaagagcctcatccccgacatcaaacccctggcggggcaggag
gctattgtggatcttcatgctgacgactctcgaatctctgaggatgagacagagcgtaat
ggtgatgatggagcacatgacaaggggctgaagatatgccggaccgtcacccaggtagta
cctgcagagggccaggagaacgggcagagggaagaagaggaagaagagaaagagcctgaa
gcagaacccccaatacctcctcaggtgtccgtagaggtggctctgcccccacctgtggag
catgaagtaaagaaagtgactttaggagataccttaactcgacgttccattagccagcaa
aagtctggagtttccattacaattgatgacccagtccgaactgctcaggtgccctccccg
ccccggggcaagatcagtaacatcgtccacatctccaatttggtgcgtcccttcacttta
ggccaactaaaggaattgttgggccggacaggaactctggtggaagaggccttctggatt
gacaagatcaaatctcactgctttgtaacgtactcaacagtagaggaagcagttgccacc
cgcacagctctacatggggtcaaatggccccagtccaatcccaaattcctttgtgctgac
tatgctgaacaagatgagctggattatcaccggggcctcttggtggaccgtccctctgaa
actaagacagaggagcagggggtaccacggcccctgcaccccccgcccccacccccagcc
cagccaccacagcacccccgggcagagcagcgggagcaggagcgggcggtgcgggaacag
tgggcagagcgggaacgggaaatggagcggcgggagcgaactcgatcagagcgtgaatgg
gatcgggacaaagttcgagaagggccccgttcccgatcacggtcccgtgaccgccgccgc
aaggaacgtgcgaagtctaaagaaaagaagagtgagaagaaagaaaaagctcaggaggaa
ccacctgccaaactgctggacgaccttttccgtaagaccaaggcagctccctgcatctac
tggctcccactgactgacagccagattgttcagaaggaggcagagcgggctgaacgggcc
aaggagcgggagaagcggcgaaaagagcaagaagaggaagagcaaaaggagcgggagaag
gaagcagaacgggaacggacccgacagctggagcgggagaagcggcgagagcacagccga
gagagggacagggaaagagagagggaaagggagcgtgacaggggtgatcgagatcgggat
agggagagggaccgggagcgaggccgggagagagaccgcagagaaaccaagcgccacagc
aggagccggagtcggagcacgcctgtgcgggaccggggtgggcgccgctag
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integrated database retrieval system
