Vulpes lagopus (Arctic fox): 121493401
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Entry
121493401 CDS
T07435
Symbol
SMARCAD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
121493401 (SMARCAD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vlg03036
]
121493401 (SMARCAD1)
Chromosome and associated proteins [BR:
vlg03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
121493401 (SMARCAD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
ERCC3_RAD25_C
CUE
TTC3_9th
Motif
Other DBs
NCBI-GeneID:
121493401
NCBI-ProteinID:
XP_041615170
LinkDB
All DBs
Position
6:92875147..92953503
Genome browser
AA seq
1026 aa
AA seq
DB search
MNLFNLDRFRFEKRSKIEEVPEAAPQPSQPGPSSPISLSAEEENAEVSRAGTPDSDITEK
TEDSSVPETTENERKASISYFKNQRGIQYIDLSSDSEDIVSPNCSSTVQEKKFNKDTVII
VSEPSEDEESQGLPTMSGRNNDDISELEDLSELEDLKDAKLQTLKELFPQRSDNDLLKLI
ESTSTMDGAIAAALLMFGDAEGGGPRKRKLSSSSEPYEEDEFNDDQSMKKKRLDHGEESN
ESAESSNNWEKQESIVLKLQKEFPNFDKQELREVLKEHEWMYTEALESLKVFAEDQDMQY
ASQSEFPNGKEASSRSQNYSKNAAKTKLKQKCSMKPQNGFNKKRKKNVFNPKRVIEDSEY
DSGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQCSQKKAQKITELRP
FNSWEALFTKMSKTNGLSEDLIWHCKTLIQERDVVIRLMNKCEDISNKLTKQVTMLTGNG
GGWNIEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLF
QEGNKGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSKYEEYNVI
VTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPV
QNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKERIAHAKQIIKPFIL
RRVKEEVLKQLPPKKDQIELCAMSEKQEQLYLGLFNRLKKSINNMEKSTEMCNVMMQLRK
MANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLCKQYRHI
NNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRL
DGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAE
DRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVDEGDEGTMPADIATLL
KTSMGL
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttttcaacttggaccgttttcgctttgagaaaaggagtaagattgaggaagtg
cctgaagcagcccctcagccctcccagcctggcccttcttcacccatttctcttagtgcc
gaagaggagaatgctgaagttagcagggcaggcacacctgattcagatattactgaaaaa
acagaagattctagtgttccagaaactacagaaaatgaaagaaaagctagtatatcatat
ttcaagaatcaaagaggaatacagtatattgatttgtcttctgatagtgaagatatcgtt
tccccaaattgctccagtacagttcaagagaagaaattcaacaaagacacagtgattata
gtttctgagccatctgaagatgaagagtcccagggccttcctaccatgtcaggtagaaat
aatgatgatatttcggaattggaagacctttcggaattggaagaccttaaagatgctaaa
cttcagaccttgaaggaacttttcccacaaagaagtgataatgatttacttaagttgatt
gaatcaacgagcactatggatggagcaattgctgccgccttgctgatgtttggtgatgca
gaaggtggtggacccaggaaaagaaaattatcttcttcttctgagccatatgaggaagat
gaatttaatgatgatcagtctatgaaaaagaaaagactggatcatggagaagaatcaaat
gagtctgcagaatctagtaataattgggaaaagcaagaaagtattgtattgaaattgcaa
aaggaatttcctaattttgataaacaggaactaagagaagtactcaaggaacatgaatgg
atgtacacagaagctttagaatctttaaaagtgtttgcagaagaccaagatatgcaatat
gcttcacaaagtgaatttccaaatggaaaagaagcttcttcaagaagtcagaattattct
aaaaatgcagctaaaacaaaactgaaacagaaatgttccatgaaaccacaaaatggtttt
aacaagaaacgtaaaaaaaatgtatttaatcctaaaagagttattgaagactctgaatat
gattcgggctctgatgtgggtagttcactagatgaggactatagtagtggtgaagaagtg
atggaggatggctataagggtaaaattcttcactttctccaagatgcttcaattggtgag
cttactttgattcctcagtgttctcagaaaaaggctcagaagataacagaactccggccc
tttaatagttgggaagctctgttcacaaagatgtccaaaactaatggcttatcagaagat
ttgatatggcattgtaaaacattgatccaagaaagggatgtagttataaggcttatgaac
aaatgtgaagacatttcaaataaattgacaaaacaagttaccatgctcactggaaatgga
ggtggatggaacatagaacaaccttccattctaaaccagagtttgtcactcaagccctat
cagaaggttggtttgaattggctggcattggtacataaacatggacttaatggcattttg
gcagatgaaatgggcctaggaaaaactattcaagccattgcattcctggcatacctcttt
caggagggtaataaaggtcctcatttgatcgttgttcccgcatcaactatagataactgg
ttaagggaagttaatttatggtgccccactttaaaggtgctctgttactatggctctcaa
gaagaacgtaaacaaattagatataacatccatagtaaatatgaagaatataatgtaatt
gtgaccacgtataattgtgcaatcagcagttctgatgatcgtagtctgtttcgacggcta
aaacttaattacgcgatttttgatgagggccatatgctgaagaatatgggctccatccgc
taccagcacctaatgacaattaatgcaaataaccgattgctgctcacaggcacacctgta
cagaataatctcttagaactcatgtcactgttgaattttgttatgccacacatgtttagt
agtagcaccagtgaaatacgaagaatgttttcttctaagacaaaatcagcagatgagcaa
agtatatatgaaaaggagagaatagcacacgcaaaacaaattataaaaccatttattctc
agaagggtaaaagaagaggttctcaagcagctaccccccaagaaagaccaaattgaattg
tgtgcaatgtcagagaaacaggagcaactctatttgggtcttttcaacagattgaaaaaa
tctatcaataacatggaaaaaagcacagaaatgtgcaatgtcatgatgcagttgagaaaa
atggccaatcatcctttattacatcgccaatattacacagctgaaaagctcaaggaaatg
tctcagcttatgctaaaggaacctacacattgtgaggctaaccctgacttgatctttgag
gatatggaagttatgacagactttgaattacatgtactttgtaaacagtatcgacatatt
aataatttccagttagatatggacttgattttagattctggaaaattccgagttttagga
tgcatcttatctgaattgaaacagaagggtgatagagttgtattatttagccaatttacc
atgatgctggatattctagaggttctcttaaaacatcatcagcatagatacctcagatta
gatgggaagactcagatttctgaaaggattcacctaattgacgagtttaacaccgacatg
gatatctttgtgtttctactgtcaacaaaagctggtggactgggaataaacctaacttca
gcaaatgttgttatacttcatgatattgactgtaacccttacaatgacaaacaagcagaa
gatagatgccacagagtaggccagactaaagaagtactagttataaaactgataagccaa
gggacaattgaagaatccatgctaaaaattaaccaacagaaattgaaactagaacaagat
atgaccacagtagatgaaggtgacgaagggactatgccagcagatatagccacgttacta
aaaacgtcaatgggcctgtga
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