Vulpes lagopus (Arctic fox): 121493606
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Entry
121493606 CDS
T07435
Symbol
PNN
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg03013
Nucleocytoplasmic transport
vlg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121493606 (PNN)
03015 mRNA surveillance pathway
121493606 (PNN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vlg03019
]
121493606 (PNN)
03041 Spliceosome [BR:
vlg03041
]
121493606 (PNN)
Messenger RNA biogenesis [BR:
vlg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
121493606 (PNN)
Spliceosome [BR:
vlg03041
]
Complex C
Other components
EJC/TREX
121493606 (PNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
121493606
NCBI-ProteinID:
XP_041615549
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Position
6:complement(56367143..56374660)
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AA seq
765 aa
AA seq
DB search
MAVAVRTLQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALSGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGAVSRLGGERRTRRESRQESDPEDDDVKKPALQSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLIEESQRKMNALFEGRRIEFAEQINKMEARPRRQSMKEKEHQVVRN
EEQKAEQEEGKVAQREEELEETGNQHNDVEIEEAGEEEEKEIGIVHSDAEKEQEEEEQKQ
EMEVKMEEETEVRESEKQQDSQPEEVMDVLEMVESVKNVIAEQEVMETNQVESVEPSENE
TSKELEPEMEFEVEPDKECKSLSPVRENASALEMENEPEEKEERESEPQPEPVAHLQPLP
QPEPEPELQPEPQPQLQPEPQLQPQLQPQPQSQSQPQPQLPLPLPLQPQPQAQAQSQPQA
VLQPQPVSQPETLPLAVLQPPVQVIQEQGHLLPERKEFPVESVKLTEVTVEPVLIVHSDS
KSKTKTRSRSRGRARNKTSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSRSSSSSSSS
TSGSSSRDSSSSTTSSSESRSRSRGRGHNRDRKHRRSVDRKRRDTSGLERSHKSSKGGSS
RDTKGSKDKNSRSDRKRSISESSRSGKRSSRSERDRKSDRKDKRR
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgcggtgagaactttgcaggagcagctagaaaaggccaaagagagcctaaag
aacgtggatgagaatattcgcaagctcaccggacgggatccgaatgacgtaaggcccatc
caagccagattgctggccctttctggtcctggtggaggtagaggacgtggtagtttattg
ctgaggcgtggattctcagatagtggaggaggacccccagccaaacagagagaccttgaa
ggggcagtcagtaggctgggcggggagcgtcggacaaggagagaatcacgccaagaaagc
gacccagaggatgatgatgttaaaaagccagctttgcagtcttcagttgtagctacctcc
aaagagcgcacacgtagagaccttatccaggatcaaaatatggatgaaaagggaaagcaa
aggaaccgacgaatatttggcttattgatgggcactcttcagaaatttaaacaagaatcc
actgttgctactgaaaggcaaaagaggcgccaggaaattgaacaaaaacttgaagtgcag
gcggaagaagaaagaaagcaggttgaaaatgagaggagagaactgtttgaagagaggcgt
gctaaacagacagaactgcggcttttagaacagaaggttgagcttgcgcagctgcaagaa
gaatggaatgaacataatgccaagataattaaatacataagaactaagacaaagccccat
ttgttctatattcccggaagaatgtgtccagctacccaaaaattaatagaagagtcacag
agaaaaatgaatgctttatttgaaggtagacgcatcgaatttgcagaacaaataaataaa
atggaggctaggcctagaagacaatcaatgaaggaaaaagagcatcaggtggtgcgtaat
gaagaacagaaggcggaacaagaagagggtaaggtggctcagcgagaggaagagttggag
gagacaggtaatcagcacaatgatgtagaaatagaggaagcaggagaggaagaggaaaag
gaaataggtatagttcatagtgatgcagagaaagagcaggaggaggaggaacaaaaacag
gaaatggaggtcaagatggaggaggaaactgaggtaagggaaagtgagaagcagcaggat
agtcaaccggaagaagttatggatgtgctagagatggttgagagtgtcaaaaatgtaatt
gctgagcaggaggtaatggaaaccaatcaagttgaaagtgtagaaccttcagaaaatgaa
actagcaaagaactggagccagagatggaatttgaagttgagccagataaagaatgtaaa
tctctttctcctgtgagagagaatgccagtgctctagaaatggaaaatgagcctgaggaa
aaagaagagagagaatctgagccccagcctgagcctgtggctcacctccagcccttgcct
cagcctgagcctgagcctgagctacagcctgagccacagcctcagctacaacctgagcca
cagttacagccccagctccagccccagccccaatcccagtcccagccacaacctcagctt
ccgcttccgcttccacttcagccccagccccaggcccaggcccagtcccagccccaagca
gtactccaaccccagcctgtctctcaacctgagactttgccattagctgttctacagcca
ccagttcaggttattcaagagcaagggcatttactacctgagaggaaggaatttcctgtg
gaatctgtaaaactcactgaggtgacagtagagccagtcttgatagtacattcagatagc
aaaagcaaaaccaaaaccaggagcagaagtagaggtcgagctagaaataaaaccagcaag
agtagaagtcgcagcagtagcagtagtagttctagtagcagctcaaccagtagcagcagt
ggaagcagttccagcagtggcagcagtagtagtcgaagtagttccagtagcagctccagc
acaagtggcagcagcagcagagatagtagcagcagcactactagtagcagcgagagtaga
agtcggagtaggggccggggacataacagagatagaaagcacagaaggagcgtggatcgg
aaacgaagggatacatcaggattagaaagaagtcacaaatcttcaaaaggtggtagtagt
agagatacaaaaggatcaaaggataagaattcccggtccgacagaaagaggtctatatca
gagagtagtcgatcaggcaaaagatcttcaagaagtgaaagagaccgaaaatcagacagg
aaagacaaaaggcgttaa
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integrated database retrieval system