Vulpes lagopus (Arctic fox): 121493870
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Entry
121493870 CDS
T07435
Symbol
DHX16
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121493870 (DHX16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vlg03041
]
121493870 (DHX16)
Enzymes [BR:
vlg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
121493870 (DHX16)
Spliceosome [BR:
vlg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
121493870 (DHX16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
WHD_HA2
AAA_22
AAA_19
AAA_30
SecA_DEAD
Flavi_DEAD
nSTAND3
Cas3-like_C_2
SRP54
Motif
Other DBs
NCBI-GeneID:
121493870
NCBI-ProteinID:
XP_041616139
LinkDB
All DBs
Position
1:72621653..72639081
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AA seq
1042 aa
AA seq
DB search
MATPAGLERWVQDELHAVLGLSERHVAQFLIGTAQRCASAEDFVQRLRDTDTLDLSGPAR
DFALRLWTKVPRKAVVEKPARAAEREARALLEKNRSYKLLEDSEESSEETVGRTGSSLQK
KRRKRKHLRKKCQEEEEEEEEISEKGRRKTGGSKQTEKPESEDEWERTERERLQDLEERD
AFAERVRQRDKDRTRNVLERSDKKAYEEAQKRLKMAEEDRKAMVPELRKKSRREYLAKRE
REKLEDLEAELADEEFLFGDVELSRHERRELKYKRRVRDLAREYRAAGEQEKLEATNRYH
MPEETRGQPSRAVDLVEEESGAPGEEQRRWEEARLGAASLKFGARDAASQEPKYQLVLEE
EETIEFVRATQLQGNEEPSGPSPPSQAQQKESVQAVRRSLPVFPFREELLAAIADHQVLI
IEGETGSGKTTQIPQYLFEEGYTKKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGY
SIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMIDEAHERTLHTDILFGLIKDV
ARFRPELKVLVASATLDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSV
LQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARI
FQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASA
NQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFD
FLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEE
ILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCY
ENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLTRSGY
RTVKQQQTVFIHPNSSLFEEQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAK
ELEDPHSKKMPKKIGKTREELG
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgccggccgggctggagcgctgggtgcaggacgagctgcacgcggtgctcggg
ctgagtgagcggcacgtagcccagtttttgatcggtaccgcgcagcgatgcgcctcggcc
gaggacttcgtacagcgcctgcgagacaccgatactctggacctcagcggaccggctcgc
gacttcgccttgagactctggaccaaggtaccacggaaggcagtggtagaaaagccagct
cgggcggccgagcgagaggcccgagccctgctggaaaagaaccgatcctataagttgctg
gaagacagtgaggagagcagtgaggagaccgtaggtagaactgggagcagtctccagaag
aagcgtagaaaacggaaacacctcaggaagaaatgtcaggaggaggaagaagaggaggaa
gagatttccgagaaagggagaagaaagacaggggggagtaaacagactgagaagccagaa
tctgaggatgagtgggagcggaccgagcgagagcgccttcaggacctggaggaacgtgat
gcctttgctgagcgggttcggcagcgagacaaggatcggactcgcaatgtcctggagcgg
tcagacaagaaggcttatgaagaggctcagaagcgcctcaagatggctgaggaagaccgg
aaagccatggttcccgagctgcggaagaaatcacgccgcgagtacttggctaagcgggag
cgagagaagcttgaggacctagaggctgagctggctgatgaggagttcctttttggggat
gtagagcttagccgacatgagcgacgggagctcaaatacaagcggcgagtgcgggatctg
gcccgagagtaccgagcggctggggagcaggagaagctggaggccaccaatcgttaccac
atgcccgaggagacccgaggccagccatcacgagctgtggatctagtggaggaggaatca
ggcgcccctggggaggagcagcgacgctgggaggaggcccggctaggggcagcatctctg
aagtttggggcccgagatgctgcctcccaggagcccaagtatcagctggtgctggaggaa
gaggagaccattgagtttgtccgggccactcagctccagggcaacgaggagccatcaggc
ccatcgcctccatcccaggcccagcagaaggagtccgtgcaggctgtccgccgcagcctc
ccagtgtttccattccgcgaggagctcttggctgccattgctgatcatcaggtcctcatc
atcgagggtgagacgggctccgggaagaccacccagatcccgcagtatctctttgaggag
ggatacacaaagaagggaatgaagattgcctgtacccagccccggagagtggcagccatg
agtgtggctgcccgagtggcccgggagatgggtgtgaagcttgggaatgaggttggctac
agcatccgctttgaggactgcacatcagagcgaactgtcctccgctacatgacagatggg
atgctcctccgggagttcctctctgaacctgaccttgcaagttacagtgtggtgatgata
gatgaggctcatgaacgaaccctacacacagacattctcttcgggttaatcaaggatgtt
gctcgtttccggcctgagctgaaagtcttggtggcttcagccacactggacactgcccgt
ttctccaccttctttgatgatgctcctgtcttccgaatccctggacgcaggtttccagtt
gacatcttctataccaaggctccagaggctgactacctagaagcttgtgtggtgtctgtg
ctgcagatccatgtgacccagccccctggggatatcctggtgttcctgacaggacaggag
gagattgaggctgcctgtgagatgctccaagatcgctgccgccgcctgggctccaaaatt
cgggagctcttggtgttacccatttatgccaacctgccttctgacatgcaggcccgtatc
ttccagcccacacccccgggggcacgaaaggtggttgtggcaacaaacatcgctgagacg
tcactcaccattgaaggcatcatttatgtgctggatccagggttctgtaagcagaagagc
tacaaccctcgcacaggcatggaatccctcactgtcacaccctgcagcaaggcctcagcc
aatcaacgagctggtcgggcgggtcgggtggctgccgggaagtgcttccgcctgtatact
gcctgggcctaccagcatgagctggaggaaaccacggtgcctgagatccagaggaccagc
ctgggcaatgttgtgttgctgctcaagagcttagggatccatgacctaatgcactttgat
ttcctggaccctccaccatatgagaccctgctgctggctttggagcagctatatgctctg
ggagccctcaaccaccttggggagctcaccacgtctggtcgaaagatggcagagctaccg
gtggatcccatgctatctaaaatgatcttggcctctgagaagtatagctgttcggaagag
attctgacagtggctgccatgctgtctgtcaataactccatcttctaccgacccaaggac
aaggtagttcatgctgacaacgcccgtgtcaacttcttcctccctggtggagaccacctg
gttctgctgaatgtctatactcagtgggctgagagtggctactcttctcagtggtgctat
gagaactttgtacagttcagatcaatgcgccgagcccgggatgtgcgagaacagctggag
gggctcttggaacgcgtagaagttggtctcagctcctgccagggggactatatccgtgta
cgcaaggccatcacagctggttacttttaccacacggcccggttgactcgtagtggctat
cgcacagtcaaacagcagcagacagtgttcattcaccccaactcctccctctttgaggaa
cagccacgctggttgctctaccacgaacttgtcttgaccaccaaggagttcatgagacag
gtattggagattgaaagcagttggcttctggaggtggctcctcattattataaagccaag
gagctagaagatccccattctaagaaaatgcccaaaaaaataggcaagacacgggaagag
ctaggataa
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integrated database retrieval system
