Vulpes lagopus (Arctic fox): 121494398
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Entry
121494398 CDS
T07435
Symbol
DDX39A
Name
(RefSeq) ATP-dependent RNA helicase DDX39A
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
vlg
Vulpes lagopus (Arctic fox)
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vlg03041
]
121494398 (DDX39A)
Enzymes [BR:
vlg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121494398 (DDX39A)
Spliceosome [BR:
vlg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
121494398 (DDX39A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
121494398
NCBI-ProteinID:
XP_041616709
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Position
7:complement(9978632..9998260)
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AA seq
427 aa
AA seq
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MAEQDVENELLDYEEDEEPQAPPESTPAPPKKDVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCH
TRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVR
NRSLNLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCM
ALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNVAELPEEIDIS
TYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcagaacaggatgtggaaaatgagcttctggattatgaggaagatgaagagccccag
gctcctccagagagcactcctgctccccccaagaaagatgtcaagggttcctacgtttcc
atccacagctctggcttccgggactttctgctgaagccggagctcctgagggccatagtg
gactgtggctttgagcatccatctgaggtccagcacgagtgtattccccaagccatcctg
ggcatggacgtcctgtgccaggccaagtctgggatgggcaagacggcggtcttcgtactg
gccaccctgcagcagattgagccagttaatggacaggtgacagtcttggtcatgtgccac
acacgggagctagccttccagatcagcaaagagtatgaacgcttctccaagtacatgccc
agtgtcaaggtgtctgtgttctttgggggcctttctatcaagaaggatgaagaggtattg
aagaagaactgtcctcatgtcgtggtggggacaccaggccggatcctggcgctagtgcgg
aaccggagcctgaacctgaagaacgtgaagcacttcgtgctggatgagtgtgacaagatg
ctggagcagctggacatgcggcgggacgtgcaggagatcttccgcttgacaccccatgag
aagcagtgcatgatgtttagcgccaccctgagcaaggagatcaggccggtctgcaggaag
ttcatgcaagatcccatggaggtgtttgtagacgacgagaccaagctcacactgcatgga
ctgcagcagtactacgtcaagctcaaggacagtgagaagaaccgcaagctcttcgatctg
ttggatgtgttggagtttaaccaggtggtgatcttcgtgaagtccgtgcaacgctgcatg
gccctggcccagctcctcgtggagcagaacttcccggccattgccatccacaggggcatg
gcccaggaggagcgtctgtcgcgctatcagcagttcaaagacttccagcggcggatcctg
gtggccaccaatctgtttggccgagggatggacattgagcgagtcaacatcgtcttcaac
tatgacatgcctgaggactcagacacctacctccaccgagtggcccgtgcaggtcgcttt
gggaccaaaggtctggctattactttcgtgtctgacgagaatgatgcaaaaatcctcaac
gatgttcaggatcggtttgaagtgaatgtggcagaacttcctgaagaaatcgacatctcc
acgtatattgagcagagccggtaa
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