Vulpes lagopus (Arctic fox): 121494579
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Entry
121494579 CDS
T07435
Symbol
APTX
Name
(RefSeq) aprataxin isoform X1
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
121494579 (APTX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vlg03400
]
121494579 (APTX)
Enzymes [BR:
vlg01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
121494579 (APTX)
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
121494579 (APTX)
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
121494579 (APTX)
DNA repair and recombination proteins [BR:
vlg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
121494579 (APTX)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
121494579 (APTX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
FHA_2
zf-C2HE
HIT
Glycoamylase
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
121494579
NCBI-ProteinID:
XP_041617075
LinkDB
All DBs
Position
7:82640928..82681481
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AA seq
342 aa
AA seq
DB search
MMRMCWLVRQDNQHQRIKLPHLEAVMVGRGPETKIIDKKCSRQQVQLKAECNKGYVKVKQ
VGVNPTSIDSVIIGKDQEAKLQPGQVLHMVNELYPYIVEFEEEAESPGLETHRKRKRSGN
SDSIERDAAQEAESSTGLEPGSDSSQCSVPLKKGKDAPTKKESLGHWSQGLKISMQDPKM
QVYKDEQVVVIKDKYPKARYHWLVLPWASVSSLKAVTGEHLELLKHMHTVGEKMIADFAG
SSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLESQAVIEMVQHA
GRVSVRDGMPELLKLPLRCHECQQLLPSIPQLKEHLRRHWPK
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgatgcggatgtgctggttggtgagacaggataaccagcaccaacgaatcaaacttcca
catttggaagcagtcatggtcgggcgtggcccagagaccaagatcattgacaagaagtgt
tctcgacagcaagtacagttgaaagcagaatgtaacaaaggatatgtcaaggtaaagcag
gtaggggtcaatcccaccagcattgactcagtcataattgggaaggaccaagaggcgaag
ctgcagcctggccaggttctccacatggtgaatgaactttatccatatattgtagaattt
gaggaggaggcagagagccctggcctggaaacacacaggaagagaaagaggtcaggcaac
agtgattctatagaaagggatgctgcccaggaagctgagtccagcacaggactggaacct
gggagtgactctagccaatgctctgtgcccctaaagaaggggaaggatgcacctaccaaa
aaggaatcattgggccactggagtcaaggcttgaaaatttctatgcaggatcccaaaatg
caggtttacaaagatgagcaggtggtggtgattaaggataaataccccaaggctcgttac
cactggctggtcttaccatgggcttccgtttccagtctgaaggctgtgaccggggaacac
cttgagctcctcaaacacatgcacactgtgggggaaaagatgattgcagattttgctggg
tccagcaaactccgcttccgattgggttaccatgccattcccagcatgagccatgtacac
cttcatgtgatcagccaggattttgattccccttgccttaaaaacaaaaaacattggaat
tctttcaatacagaatacttcctagaatcacaagctgtgatagagatggtacagcacgct
ggcagagtgagtgtccgagatgggatgcctgagctcttgaagctgcctctccgttgtcac
gagtgccagcagctgctgccttccattcctcagctgaaagagcatctcaggaggcactgg
ccaaagtga
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