Vulpes lagopus (Arctic fox): 121494724
Help
Entry
121494724 CDS
T07435
Symbol
USHBP1
Name
(RefSeq) Usher syndrome type-1C protein-binding protein 1 isoform X1
KO
K21881
Usher syndrome type-1C protein-binding protein 1
Organism
vlg
Vulpes lagopus (Arctic fox)
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
vlg03037
]
121494724 (USHBP1)
Cilium and associated proteins [BR:
vlg03037
]
Primary cilia and associated proteins
USH complex and associated proteins
121494724 (USHBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USHBP1_PDZ-bd
Motif
Other DBs
NCBI-GeneID:
121494724
NCBI-ProteinID:
XP_041617418
LinkDB
All DBs
Position
7:complement(12637859..12647317)
Genome browser
AA seq
703 aa
AA seq
DB search
MSARATRPRSRRGRHAPPGELDPVAESSEEAEAASGNSELGPVPSQESCKPRLQGPEAEA
SGQDLGNRTNKEAEGDSSRGLAPSPEGPRQPAEEGHQATDVAPQDGETVPPRPEASDVFQ
VLQHALSSLEAAAAAWRRRPPSCPGPGEAEDRSEVGPRPCLEQEGASGCQREAASLAERN
DWLRLALGSREEELIRTQASLQAIQGEKEMLQREVQELQDSLLRLESFPPPSPGQAGGSG
SGSSSSGVDEEPWGTQDPFSLAHPLLRRLRSDSSTQMLGPLPTQPPAPGIHVMEAQMEQL
QASIEKLKCFNRLLSAVLQGYKGRCEGLSMQLGQREAEATALRLALQYSEHCEEAYGVLL
TLLEADSGAREEAPTGDLEAAEKEAQRLLAQEEAAMDGETPRDTQPSPEGSSVDRPTPQE
VATQLWGYIQRLRERRALVKIPPKPGPTLAPMPTVPHAEALVQAILGTQPGPALPRLEKM
QIQRDLAATRETLADLMLRLQLVRREKRGLELREAALRAQGPAHVLLLEQLRWERAQLRT
GGANSSSGDSSGGRSSGDEEELSQGPPALRRGGRGVDGGQVGKVQGPETLAQELAASLNR
ALGLREQLQSLREELEHVAQKGRARCAQSAELNRDLCKAHSALVLAFRGAHRKQEEQQRK
LEQQVALMEARQAEELEVLEATARALGRPRQPHRPPRLGETFL
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcccgggccacgcgaccccgaagccggcgagggaggcacgcaccacctggggag
ctggatcccgtggcggagagttcagaggaggctgaggcagccagcggaaactctgagctg
ggccctgtgccatctcaggagagctgcaagccgaggctgcaggggccagaggcagaggcc
agtgggcaggacctggggaacaggaccaacaaagaggctgagggggactctagcagagga
ctggccccatctcccgagggaccccgccagcctgcagaggaaggccaccaggccacagat
gtagctccacaggatggggagactgtcccccccaggcctgaagcctctgacgtgtttcag
gttctccagcatgctctgagctccctggaggcggcggcggctgcctggcgccgccggccc
cccagctgtcctgggcccggggaggcagaggacagaagtgaggtgggaccaaggccctgc
ttggagcaggagggggcaagtggttgccagagggaggcagccagcctggcagagaggaat
gactggctacgattggccttgggcagccgagaggaggagctgattcgcacgcaggcctcc
ctgcaggccatccagggggagaaggagatgctgcagagagaggtccaggagctgcaggat
tcgctgctgaggctggaatctttcccacctccctcccctggccaagcaggtggctcaggc
agtggctccagcagttctggggtagatgaggagccctggggaactcaggaccccttctct
ctggctcatcccctgctccgacgcctccggagtgattccagcactcagatgcttggacct
ctccccactcaaccccccgccccagggatacacgtcatggaagcccagatggaacagctc
caggcgagcatcgagaaactcaaatgtttcaaccgtctgctctcagctgtgctgcagggg
tacaagggccggtgtgaaggcctcagcatgcagctgggccagcgggaggctgaagccaca
gcactgcgtctggctttgcaatacagtgagcactgtgaggaggcgtatggagtcctgctc
actctcctggaggcagactcgggagcaagagaggaagcccctacgggtgacctggaggca
gctgagaaggaagctcagaggctgttggcacaagaggaggctgcgatggatggagagaca
ccacgggatacacagccaagccctgagggcagtagtgtggatcggcccacaccacaggag
gtggctacccagctctggggctatatccagcgtctccgggagcgccgtgctctggtgaag
attcccccaaaaccgggcccaactttggcacccatgcccactgtgccccatgcagaagct
ctggtgcaggccattctggggacccagcctggcccggccctaccccggttggagaaaatg
cagatccagcgagacttggcagccacacgggagactctggctgacctgatgctgcggctc
cagttggtgcggcgggagaagcggggtctggagcttcgagaggctgccctccgagcccag
ggcccagcccacgtgctcctgctagagcagctgcggtgggagcgggcacagctacggacg
ggtggggccaacagtagcagtggggacagcagtggaggcaggagcagtggagacgaagag
gaattgtctcagggccctcctgctctccgcaggggtggcaggggcgttgatggaggccag
gtgggcaaagtgcagggcccggagactctagcccaggaactggcagcgtcacttaaccgg
gccctgggcctgcgggagcagctgcagtctctgcgggaggaactagaacacgtggctcag
aaggggcgagccagatgtgctcagagtgctgagctgaacagggacttatgcaaggctcac
agtgccctggtcctggccttccgaggtgcccaccggaagcaggaagagcaacagaggaag
ctggagcagcaggtggcattaatggaggctcgacaggcagaggagctggaggtgctagaa
gccaccgcaagggcactggggaggcccagacaaccccaccggcctccccggctgggagag
acctttctgtag
DBGET
integrated database retrieval system
