Vulpes lagopus (Arctic fox): 121494915
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Entry
121494915 CDS
T07435
Symbol
XPC
Name
(RefSeq) DNA repair protein complementing XP-C cells
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
121494915 (XPC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vlg03400
]
121494915 (XPC)
DNA repair and recombination proteins [BR:
vlg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
121494915 (XPC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
SOG2
Transglut_core
zf-B_box
Motif
Other DBs
NCBI-GeneID:
121494915
NCBI-ProteinID:
XP_041617946
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All DBs
Position
7:53920614..53950040
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AA seq
975 aa
AA seq
DB search
MPRPPPPLGAGSYSASRGSVRHGRGESCPGSMVRKRAAGREPQGRGPCGRKAKGKSTAAR
EAAADISEDEKPLKRSLLSKVSRAKRKRGCSGPGGPAHSPAKMKVAKVSVKSENPKIVKD
EALSDGEEFRDFASVRKKAHPSQREAAVDKGSCEGDDEEESEDEWEEVEELGEPVPGDVG
ENAAFSKSVLPVKPVEIEIETPQQAKARERSERIKVEFETYLRRMMKRFSKEVREDTHKV
HLLCLLANGFYRSNICNQPDLLAIGLSIVPTRFTRVPPQDVDAGYLSNLVKWFVGTFTVN
ADLSTNEQDGLQTTLERRFAIYSARDDEELVHIFLLILRALQLPTRLVLSLQPLPLKLPT
AKGKKATTERSAEDPGSSLETSSPVAEGQTKPKTSKGTRQEDTSSKSRGSTSAKGKKGKA
AAVGKRRREPSSSGEEERKAGGQEEETQRRRYGRERQVASRVSYKEESASDKGSSGSDFE
LSSGEAHHSSDEDSEPVLPRQRRAPGPQRTKVGSRTDSRTQSGRPSKHPGFPAASTSSSS
SKSKQGKKISSDGEGAERRKAAGVDQWLEVFCEQEEKWVCVDCVHGVVGQALACYKYATK
PMTYVVGIDGDGSVRDVTQRYDPAWMTATRKCRVDAKWWAETLRPYQSLLVEREKKEDSE
FQAKHLGQPLPTVIGTYKNHPLYALKRHLLKYEAIYPETAAILGYCRGEAVYSRDCVHTL
HSRDTWLKQARVVRLGEVPYKMVKGYSNRARKARLAEPQLQDQNDLGLFGKWQTEEYQPP
VAVDGKVPRNEFGNVYLFLPSMMPVGCVQLNLPNLHRVARKLDIDCVQAITGFDFHKGYS
HPITDGYIVCEEYKDVLLAAWENEQALIEKREKEKREKRALGNWKLLARGLLIRERLKLR
YGDESGTGAPQAHAGGGLSSDEEEGTSSQAEASRILAASWPQNREAEEEQKPKCSKKTKR
EKKAAASHLFPFEKL
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgccccccaccccctcttggggcggggtcctactcagcatcccgcggttcggtg
cgtcacggtcgaggggagtcttgcccgggcagcatggttcggaagcgcgcggccggcagg
gagccgcagggacgcgggccgtgcggccggaaggctaagggcaagagcacggccgcgcgt
gaggcggcggcggatatctcagaagatgagaaacctctaaagaggagccttctctccaaa
gtctcacgagcaaagcggaagagaggctgcagtggtcctgggggccctgcccacagtcca
gccaaaatgaaagtggccaaggtgtctgttaaatctgaaaaccccaaaattgtgaaggat
gaagccctcagcgacggggaggagttcagggactttgccagtgttcggaagaaggcacac
ccttcacagagagaggctgctgtggacaaaggcagctgtgaaggagatgatgaggaagag
agtgaagacgaatgggaagaggtagaagaacttggtgagcctgtgccaggtgatgtggga
gagaatgcagccttctctaaatctgttctgcctgtgaaaccagtggagatagagattgaa
acaccccagcaggcgaaagcaagagaaagaagcgaaaggataaaagtggagtttgagacc
tatctccggaggatgatgaaacgtttcagtaaagaagtccgtgaggacacccacaaggtt
cacctgttgtgcctgctggcgaatggtttctatcgaagtaacatctgcaaccagccagat
ctgcttgctatcggcctgtctattgtcccaactcgctttaccagagtgccacctcaagac
gtggatgccggctacctgtcaaacctggtgaaatggtttgttggtacatttacagttaat
gcagacctctcaaccaacgagcaagatggcctacagactacgttggaaaggaggtttgct
atttactctgctcgagatgatgaagagttggtccatatatttttattgatcctgcgggcc
ctgcagctcccgacccgactggtgctgtctttgcagccacttcctctgaagctacctaca
gcaaagggaaagaaagctaccacggagagatctgcagaggatcctggcagctccttggaa
acttccagcccagttgcagaaggccaaaccaaacctaagaccagcaaaggaaccagacaa
gaggacacatcttctaaaagccgtggcagtacaagtgccaaagggaagaagggcaaggca
gctgcagttgggaagagacggagagagccctcctctagtggggaagaagagcgcaaggca
ggaggacaagaggaggaaacccagagacgtcggtatggccgggagcggcaggtggcctcc
agggtgtcttataaagaagagagcgcaagtgacaaaggcagcagtggctctgacttcgag
ctttccagtggggaagcacatcattcatctgatgaggattctgaacctgtccttcccagg
cagagaagagccccaggcccccagaggacaaaggtagggtccaggactgactccaggacc
caaagtggaagaccctctaagcatcccggttttccagcagcatccacaagctcttcaagc
agtaagagtaagcaaggcaagaaaatctccagtgatggtgagggggcagaaagaaggaaa
gcagctggtgtagaccagtggctagaggtgttctgtgagcaggaggaaaagtgggtgtgt
gtggactgtgtgcatggtgtggtgggccaggctctggcctgttacaagtatgctaccaag
cccatgacctacgtggtgggcatcgacggtgatggctcggtccgggatgtcacccagagg
tacgacccagcctggatgactgcgacccgcaagtgccgggttgatgccaagtggtgggct
gagaccttgagaccataccagagcctgttggtggagagggagaagaaggaagattcagag
ttccaggcaaaacacctgggccaacctttgcctacggtcattggcacatacaagaaccac
cctctgtatgccctgaagaggcatctcctgaaatacgaggccatctaccctgaaacagct
gccatccttgggtactgtcgtggagaagctgtctactccagggattgtgtgcacaccttg
cattcccgggatacctggctgaaacaagcccgtgtggtgaggctgggagaagtgccctac
aagatggtgaagggctattccaaccgggcccggaaagcccgcctcgccgagccccagctg
caggaccaaaatgacctgggcctgtttggcaagtggcagacagaggagtaccagccaccc
gtggctgtggacggcaaggtcccccggaatgaatttgggaatgtgtacctcttcctgccc
agcatgatgcctgtcggctgtgtccaactgaacctgcccaacctgcaccgcgtggcccgc
aagctggacattgactgtgtgcaggccatcactggcttcgacttccataaaggctactcc
catcccataactgatgggtacattgtctgcgaggaatacaaagacgtgctcctggccgcc
tgggaaaatgagcaggcactcattgaaaagagggagaaggagaaaagagagaagcgggcc
ctagggaactggaagctgctggccaggggactgctcatcagggagaggctgaagcttcgt
tacggggacgagagtggtacaggagctccccaagcacatgcaggtggtggactctcttct
gatgaagaggaggggactagctctcaagcagaagcatccaggatcctggcggcctcctgg
ccccaaaaccgagaggctgaagaagagcagaagccaaagtgctctaagaagaccaaaagg
gaaaagaaggcagcggcctcccacctgttcccatttgagaagctgtga
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