Vulpes lagopus (Arctic fox): 121494928
Help
Entry
121494928 CDS
T07435
Symbol
SMARCC1
Name
(RefSeq) SWI/SNF complex subunit SMARCC1 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg03082
ATP-dependent chromatin remodeling
vlg04714
Thermogenesis
vlg05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121494928 (SMARCC1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
121494928 (SMARCC1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
121494928 (SMARCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vlg03021
]
121494928 (SMARCC1)
03036 Chromosome and associated proteins [BR:
vlg03036
]
121494928 (SMARCC1)
Transcription machinery [BR:
vlg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
121494928 (SMARCC1)
Chromosome and associated proteins [BR:
vlg03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
121494928 (SMARCC1)
PBAF complex
121494928 (SMARCC1)
GBAF(ncBAF) complex
121494928 (SMARCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
Chromo
BRCT_2
DUF919
SpeFL
Motif
Other DBs
NCBI-GeneID:
121494928
NCBI-ProteinID:
XP_041617982
LinkDB
All DBs
Position
7:complement(16803273..16976562)
Genome browser
AA seq
1107 aa
AA seq
DB search
MAAAAGGGGLGAAAGAAGAGGAAAAAGLAVYRRKDGGPASKFWESPETVSQLDSVRVWLG
KHYKKYVHADAPTNKTLAGLVVQLLQFQEDAFGKHVTNPAFTKLPAKCFMDFKAGGTLCH
ILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQSNCLTRPNIYLIPDIDLKL
ANKLKDIIKRHQGTFTDEKSKASHHIYPYPSSQEDEEWLRPVMRKDKQVLVHWGFYPDSY
DTWVHSNDVDAEIEDPPIPEKPWKVHAKWILDTDVFNEWMNEEDYEVDENRKPVSFRQRI
STKNEEPVRSPERRDRKASANARKRKHSPSPPPPTPTESRKKSGKKGQASLYGKRRSQKE
EDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDEQDEETVTTGG
KEDDDPSKGDQSRSLDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNK
SKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVD
PESRPMAMGPPPTPHFNVLADTPSGLVPLHLRSPQVPAAQQMLNFPEKNKEKPIDLQNFG
LRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILH
FLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALE
EFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLEGAEEEK
MEADTDGQQPEKAENKGENETDEGDKAQDGENEKNSEKEQDSEVSEDTKSEEKETEENKE
LTDTCKERESDLGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLV
ETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQMEQ
QQHGQNPQQAHQHSGGPGLAPLGAAGHPGMMPHQQPPPYPLMHHQMPPPHPPQPGQMPGP
GSMIPGQPIPGRMIPTVAANIHPPGSGPAAPGMPPMPGNILGPRVPLTAPNGMYAPPPQQ
QPPPPPPPPADGVPPPPAPGPPASAAP
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggcggcgggcggcggcgggctgggggcggcggcgggcgccgcgggcgcggga
ggcgcggcggcggccgcgggcctggccgtttatcggcggaaggacggtggcccggccagc
aagttttgggagagcccggagacggtgtcccagctggattcggtgcgggtctggctgggc
aagcactacaagaagtatgttcatgcggatgctcctaccaataaaacactggctgggcta
gtggtacagcttcttcagttccaggaagatgcctttgggaagcatgtcaccaatccggcc
ttcaccaaactcccggcaaaatgtttcatggatttcaaagctggaggcaccttgtgtcac
attcttggggctgcttacaagtacaaaaatgaacaaggatggcggaggtttgatctacag
aatccatctcgaatggatcggaatgttgaaatgtttatgaacattgaaaaaactttggtg
cagagcaattgtctgaccagacccaacatctacctcattccagacattgatctgaagttg
gctaacaaattgaaagatattatcaaacgacatcaggggacttttactgatgagaagtca
aaagcttcccaccacatttatccatatccttcctcacaagaggatgaagaatggttgaga
ccggtgatgagaaaagataagcaggtgttagtgcattgggggttttacccagacagctat
gatacttgggtccatagtaatgatgttgatgcagaaattgaagatccaccaattccagaa
aagccatggaaggttcatgcgaagtggattttggacactgatgttttcaatgaatggatg
aatgaggaggattatgaggtagatgagaacaggaagcctgtgagctttcgtcagcgaatt
tcaacaaagaatgaagagccagtcagaagtccagagagaagagataggaaagcatcagct
aatgctcgaaagaggaaacattcaccttcccctccacctcctacacccacagaatcccgg
aagaagagtggaaagaaaggtcaagctagtctctatgggaagcgcagaagtcaaaaagag
gaagatgagcaagaagatcttaccaaggacatggaagacccaacacccgtacccaacata
gaggaagtggtgcttccaaaaaatgtgaacccaaagaaggacagtgaaaatacacctgta
aaaggaggaactgtagcagatctagatgagcaggatgaagaaacagtcacaacaggagga
aaggaagatgacgatcctagcaaaggtgatcagagtcgctcacttgaccctggagaagat
aatgtgacagagcagaccaatcacattattattcctagttatgcatcttggtttgattac
aactgtattcacgtgattgaacggcgtgctcttcctgagttcttcaatggaaaaaacaaa
tccaagactccagaaatatacttggcatatcgaaattttatgattgacacatatcgccta
aacccacaagagtatttaaccagcactgcttgtcggaggaacttgactggagacgtgtgt
gctgtgatgagggttcatgcctttttagagcagtggggtcttgttaattaccaagtggat
ccagaaagtcgacccatggcaatgggacctcctcctactcctcattttaatgtgttagct
gataccccctctgggcttgtgcctctacatcttcgatcacctcaggtccctgctgctcag
cagatgttaaattttcctgagaagaacaaggagaagccaattgatttgcagaactttggt
cttcgcactgacatttactccaagaaaaccttagcaaagagtaaaggtgctagtgccgga
agagaatggactgaacaggagaccctcctgctcctggaggccctggagatgtacaaggat
gattggaacaaagtgtcagagcacgtcggaagtcgtactcaggatgaatgcatcctccac
tttctgaggcttcctattgaggacccataccttgagaattcggatgcttccctggggccc
ctggcctaccagcctgtccctttcagtcagtctggaaacccagtcatgagcactgttgct
tttttggcatctgtggtggaccctcgtgtggcatctgctgcagcaaaagcagctttggag
gagttttctcgggtcagagaggaggtcccattggaattggttgaagctcatgtcaagaaa
gtacaagaagcagcacgagcctctgggaaagtggatcccacctacggcctggaaagcagc
tgtattgcaggcacaggacccgatgagccagaaaaacttgaaggagctgaagaggaaaaa
atggaagcagatactgatggtcagcagcctgaaaaggcagaaaacaaaggggaaaatgaa
acagatgaaggtgataaagcacaagatggagaaaatgaaaaaaatagtgagaaggagcag
gacagtgaagttagtgaggataccaaatcagaagaaaaggaaactgaggagaacaaggaa
ctcactgatacttgtaaagaaagagaaagcgatctcgggaagaagaaagtagagcacgaa
atttccgaaggaaatgtggccacggccgcagcagctgctcttgcctccgctgcaaccaaa
gccaagcacctggctgctgtggaagagagaaagatcaaatctctagtggccctcctggtt
gagacacagatgaagaaattggagatcaaacttcgacattttgaggagctggaaactatc
atggacagagaaaaggaggctttagaacaacagaggcagcagctgctcactgaacgccag
aacttccacatggaacagctgaaatatgccgaattgcgagcccgacagcaaatggaacag
cagcagcatgggcagaaccctcagcaggcacaccagcactcaggaggacctggcctggca
ccactcggagcagcagggcaccctggcatgatgcctcatcagcagccccctccctaccct
cttatgcaccaccagatgccaccacctcatccaccgcagccaggtcagatgccaggtcca
ggttccatgatccctgggcaacccattccaggccgcatgattcccactgttgcagccaac
atccacccccctgggagtggcccagccgctcctggtatgcctcccatgccaggaaatatc
ttaggaccccgggtaccgctcacggcacctaatggcatgtatgcccctccaccgcagcag
cagccgccgccaccaccaccaccgcctgcagatggagtccctccgcctcctgctccaggc
cctccagcgtcggcagccccctag
DBGET
integrated database retrieval system
