Vulpes lagopus (Arctic fox): 121494945
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Entry
121494945 CDS
T07435
Symbol
SMARCA4
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg03082
ATP-dependent chromatin remodeling
vlg04714
Thermogenesis
vlg05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121494945 (SMARCA4)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
121494945 (SMARCA4)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
121494945 (SMARCA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vlg03021
]
121494945 (SMARCA4)
03036 Chromosome and associated proteins [BR:
vlg03036
]
121494945 (SMARCA4)
Transcription machinery [BR:
vlg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
121494945 (SMARCA4)
Chromosome and associated proteins [BR:
vlg03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
121494945 (SMARCA4)
Chromatin remodeling factors
BAF complex
121494945 (SMARCA4)
PBAF complex
121494945 (SMARCA4)
GBAF(ncBAF) complex
121494945 (SMARCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
DUF2009
Motif
Other DBs
NCBI-GeneID:
121494945
NCBI-ProteinID:
XP_041618031
LinkDB
All DBs
Position
7:7908889..8002817
Genome browser
AA seq
1650 aa
AA seq
DB search
MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG
PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGAHAGMGPPPSPMDQHSQGY
PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL
RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP
GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ
KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG
LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV
VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL
QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK
LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG
PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES
GSEEEEEEEEEEQPQPAQPPNLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV
SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE
MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA
RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH
YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE
TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD
GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG
KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK
TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR
VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESR
HCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMD
LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS
DSLTEKQWLKTLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDES
KKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEY
YELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVF
TSVRQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGSRRRPS
RGSRAKPVVSDDDSEEEQEEDRSGSGSEED
NT seq
4953 nt
NT seq
+upstream
nt +downstream
nt
atgtccactccagacccacccctgggcggaactcctcggccaggcccttccccgggcccg
ggaccctcccctggagccatgttgggccctagtccaggtccctcacctggctctgcccac
agcatgatggggcccagtccgggacctccctcagcaggacaccccatcccgacccagggg
cctggagggtaccctcaggacaacatgcaccagatgcacaagccaatggagtccatgcat
gagaagggcatgtcggatgacccccgctacaaccagatgaagggaatggggatgcggtca
ggggcccatgcagggatggggcccccgccaagccccatggaccagcactcccaaggttac
ccttcccccctgggcggctccgagcatgcctccagtccggttccagccagtggcccgtcc
tcaggcccacagatgtcctctgggccaggaggagccccactggatggtgccgatccccag
gctttgggacagcagaaccggggcccgactccatttaaccagaaccagctgcatcagctc
agagcccagatcatggcctacaagatgctggccagggggcagcccctccccgaccacctg
cagatggcagtgcagggaaagcggccgatgcctgggatgcagcagcagatgccaacacta
cctccaccctctgtgtccgcaacaggacctggccctggccccggccccggccctggcccg
ggtccaggaccagcacctccaaattatagcaggcctcacgggatgggagggcccaacatg
ccccccccaggaccctcaggcgtgccccctgggatgccaggtcagccccctggagggcct
cccaagccttggcctgaaggacccatggcgaatgctgctgcccccacgagcacacctcag
aagctgatccccccacagccaacaggccgcccctcacctgcgccccccgccgtcccgccc
gctgcctccccggtgatgccaccccagacgcagtcaccaggacagcctgcccagcctgcc
cccatggtgccgttgcaccagaagcagagccgcatcacccccatccagaagccgcggggc
ctggaccctgtggagatcctgcaggagcgggagtacaggctgcaggctcgaatcgcccac
cgaattcaggaacttgaaaaccttcccgggtccctggccggggatttgcgaaccaaagcg
accattgagctcaaggccctcaggctgctgaacttccagaggcagctacgacaggaagtg
gtggtgtgcatgaggagggacacggccctcgagacggccctcaacgccaaggcctacaag
cgcagcaagcggcagtccttgcgtgaggcccgcatcaccgagaagctggagaagcagcag
aagattgagcaggagcgcaagcgccggcagaagcaccaggaatacctcaacagcattctg
cagcatgccaaggatttcaaagaatatcacagatcggtcacaggcaaaatccagaaactc
acgaaggcggtggccacgtaccacgccaacacggagagggaacagaagaaggaaaatgaa
agaattgagaaagagagaatgcggagactcatggctgaagatgaggaggggtaccgcaag
ctcatcgaccagaagaaggataagcgcttggcctacctcttacagcagacagatgagtat
gtggctaacctcacggagctagtgcggcagcacaaggctgcccaagtcgccaaggagaaa
aagaagaaaaagaaaaagaagaaggcagaaaatgcagaaggacagacgcctgcaatcgga
cctgatggcgagcctctggatgagaccagccaaatgagtgacctgccggtgaaagtgatc
catgtggagagtgggaagatactcacgggcacagacgcccccaaagcagggcagctagag
gcctggcttgagatgaacccgggatatgaagtagctccaagatctgatagtgaagaaagt
ggctcagaagaagaggaggaggaggaggaggaggaacagccgcagccagcacagcctccc
aacctgcccgttgaggagaagaagaagattccagatccagacagtgatgacgtctcagag
gtggatgcccggcacatcattgagaatgccaagcaagacgttgatgatgagtatggcgtg
tcccaggcccttgctcggggcctgcagtcctattatgctgtggcccacgctgtcactgag
agagtggataagcagtcggcacttatggtcaatggtgtcctcaaacagtaccagatcaaa
ggcttggagtggctggtgtccctatacaacaacaacctgaatggcatcctggctgacgag
atgggcctgggaaagaccatccagaccatcgctctcatcacatacctcatggagcacaag
cggatcaacgggccctttctcatcatagtacctctctccacgctgtcaaactgggcatat
gaatttgacaagtgggcccccagtgtggtgaaggtgtcttacaagggttctccagcagcc
aggcgagctttcgtcccccagctccgaagtggcaagttcaacgtcttgctgacaacttat
gagtacatcattaaggacaagcacattcttgcaaagatccgttggaagtacatgatcgtt
gatgaaggccaccgaatgaagaaccaccattgcaagctgacgcaggtccttaacactcac
tatgtggccccacgccgcctgctgctgactggcaccccgctgcagaacaagctccccgag
ctctgggcactcctcaacttcctgctgcccactatcttcaagagctgcagcacctttgag
cagtggttcaatgcgccctttgccatgactggagaaaaggtggacctgaacgaggaggag
actattcttatcatccgtcgtctccacaaagtgctgcggcccttcctgctccggcggctc
aagaaggaagtagaagcccagttgcctgagaaggtggaatatgtcatcaaatgtgacatg
tctgcactacagcgagtgctctaccggcacatgcaggccaaaggagtgctgctcactgat
ggctccgagaaggacaagaagggaaaaggtggcaccaagaccctgatgaacaccatcatg
cagctgaggaagatctgcaaccacccgtacatgttccaacacatcgaggagtccttctcc
gagcacttggggtttaccggtggcattgtgcaagggctggacctgtaccgagcctcgggc
aagtttgagctcctcgataggattcttcccaaactccgtgccaccaaccacaaagtgctg
ctgttctgtcagatgacctccctcatgacgatcatggaagattattttgcgtatcgcggc
tttaaatacctcaggctcgatggaactacgaaagcggaggaccggggcatgctgctgaaa
accttcaacgagcccggctccgagtacttcatcttcctactcagcacccgagctgggggg
cttgggctaaacctccagtccgccgacactgtgatcatctttgacagcgattggaacccc
caccaggacctacaagcccaagaccgcgcccaccgcatcgggcagcagaacgaggtgcgg
gtgctccgtctctgtacggtcaacagtgtggaggagaagattctggccgcagccaagtac
aagctcaacgtcgaccagaaggtgatccaagctggcatgtttgaccaaaagtcctccagc
cacgagaggcgcgccttcctgcaggccatcctcgagcatgaggagcaggatgagagcaga
cactgcagcacgggcagcggcagtgccagcttcgcccacactgcccctccgccagcgggc
gtcaaccccgacttggaggagccacctctaaaggaagaagacgaagtgcccgatgatgag
acggtgaaccagatgattgcccggcacgaggaggaatttgacctgttcatgcgcatggac
ctagaccgcaggcgcgaggaggcccgaaatcccaagcggaagccacgcctgatggaggag
gatgagcttccttcgtggatcatcaaggacgatgctgaggtggagcggctgacctgtgag
gaagaagaagagaaaatgtttggccgtggctcccgccatcgcaaggaggtagactacagc
gactcgctgactgagaagcagtggctcaagaccctgaaggccatcgaggagggcacgctg
gaggagatcgaagaggaggtccggcagaagaaatcgtctcggaagcgcaagcgggacagc
gacgccggctcctccaccccaaccaccagcacccgcagccgtgacaaggacgacgagagc
aagaagcagaagaagcgtggccggccacctgccgagaagctctccccaaaccctcccaac
ctcaccaagaagatgaagaagatcgtggatgctgtgatcaagtacaaggacagtagtagt
ggacgtcagctcagcgaggtgttcatccagctaccctcccgcaaggagctgcccgagtat
tacgagctcatccgcaagcctgtggacttcaagaagataaaggaacgcatccgcaaccac
aagtaccgcagcctcaatgacctggagaaggacgtcatgctgctgtgccagaatgctcag
accttcaacctcgagggctccctgatctatgaagactccatcgtcctacagtctgtcttc
accagcgtgcggcagaaaattgagaaagaggatgacagtgagggcgaggagagcgaggaa
gaggaggagggcgaggaggaaggctctgagtctgagtcccgctcggtcaaagtgaagatc
aagctcggccggaaagagaaggcacaggaccggctgaaggggagccggcggcggccgagc
cgcggttcgcgagccaagccagtggtgagcgatgatgacagtgaggaggagcaggaggag
gaccgctcaggaagtggcagcgaggaagactga
DBGET
integrated database retrieval system
