Vulpes lagopus (Arctic fox): 121495005
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Entry
121495005 CDS
T07435
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
vlg
Vulpes lagopus (Arctic fox)
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vlg04121
]
121495005 (PDZRN3)
Enzymes [BR:
vlg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121495005 (PDZRN3)
Ubiquitin system [BR:
vlg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
121495005 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
Sina_ZnF
zf-TRAF
zf-C3HC4_4
zf-RING_5
TRAF3_RING
Prok-RING_4
PDZ_Tricorn
zf-rbx1
CEP104_ZnF
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
121495005
NCBI-ProteinID:
XP_041618155
LinkDB
All DBs
Position
7:complement(39378891..39616404)
Genome browser
AA seq
1050 aa
AA seq
DB search
MGFELDRFDGDVDPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPARCRGRL
SAKELNHVLPLKRLILKLDIKCAHAARGCGRVVKLQQLPEHLERCDFAPARCRHAGCGQV
LLRRDVEAHMRDGCDARPVGRCQEGCGLPLTHGEQRAGGHCCARALRAHNGALQARLGAL
HKALKKEALRAGKREKSLVAQLAAAQLELQMTALRYQKKFTEYSARLDSLSRCVAAPPAG
KGEETKSLTLVLHRDSGSLGFNIIGGRPCVDNQDGSSTEGIFVSKIVDSGPAAKDGGLQI
HDRIIEVNGKDLSRATHDQAVEAFKTAKEPIVVQVLRRTPRTKMFTPPSESQLVDTGTQT
DITFEHIMALTKMSSPTPPVLDPYLLPEEHPSAHEYYDPNDYIGGIHQEMDREELELEEV
DLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQN
REEAVALLTSEENKNFSLLIARPELQLDEGWMDEDRNDFLDHLHMDMLEEQHQQAMQFTA
SRLQQKKHEEDGGTTDTATILSNQHEKDSGVGRTDESTRNDESSEQENNGDDATASSTPL
AGQRKLTCSQDTLGSGDLPFSSESFLSADCADADYLGIPVDECERFRELLELKCQAKGSS
SPYSLYLDASKSDPESVDKELELLNEELRSIELECLSIVRAHKMQQLREQYRESWMLHHS
GFRNYNTSVDVRRHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLELSPDNSLRRAAE
GGAEAYGPAAPKSLLSITEDAEAGGAGLGPAAPRELEAGPAPERERERRPGDDGGSPGSP
GPGGPSFPHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQMSLVSMCKDLAPAGAAG
ARLEWKVKVRSDGSRYITKRPVRDRLLRERALKIREERSGMTTDDDAVSELKLGRYWSRE
ERKQHVVKAKEQRRRREFMMQSRLECLREQQAADDRREVSILELSHKKMMKKRNKKIFDN
WMTIQELLTHGTKSPDGTRVYNSFLSVTTV
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgagctggaccgcttcgacggcgacgtggacccggacctgaagtgcgcgctg
tgccacaaggtcctggaggacccgctgaccacgccgtgcggccacgtcttctgcgccggc
tgcgtgctgccctgggtggtgcaggagggcagctgccccgcgcgctgccgcggccgcctg
tcggccaaggagctcaaccacgtcctgccgctcaagcgcctcatcctcaagctggacatc
aagtgcgcgcacgcggcgcgcggctgcggccgggtggtcaagctgcagcagctgcccgag
cacctggagcgctgcgacttcgcgcccgcgcgctgccgccacgcgggctgcggccaggtg
ctgctgcggcgcgacgtggaggcgcacatgcgcgacgggtgcgacgcgcggcccgtgggc
cgctgccaggagggctgcgggctgcccctgacgcacggcgagcagcgcgcgggcggccac
tgctgcgcgcgggccctgcgggcgcacaacggcgcgctgcaggcccgcctgggcgcgctg
cacaaggcgctcaagaaggaggcgctgcgcgcgggcaagcgcgagaagtcgctggtggcg
cagctggccgcggcgcagctggagctgcagatgaccgccctgcgctaccagaagaagttc
accgagtacagcgcgcgtctcgactcgctcagccgctgcgtggccgcgccgcccgccggc
aagggtgaagaaaccaaaagtctgactcttgtgctacatcgggactctggctccctggga
ttcaatattattggcggccggccttgtgtggacaaccaagatggatcgtccactgaagga
atctttgtatccaaaatagttgacagtgggcccgcagccaaggacggaggcctgcaaatt
catgacaggattattgaggtcaatggtaaagacttatccagagcgactcatgaccaggct
gtggaagctttcaagacagccaaagagcccattgtggtacaggtgctgaggagaacccct
cggaccaaaatgttcacgcctccgtcagagtcacagctggtggacacgggaacccagacc
gacatcaccttcgagcacatcatggcactcacgaagatgtcctccccaaccccaccagtg
ttggatccctatctcctgcccgaggagcacccctcagcccacgagtactatgaccccaat
gactacattggaggcatccatcaggagatggacagggaagagctggagttggaggaagtg
gatctctacagaatgaacagccaggacaagctgggcctcactgtgtgctaccggaccgat
gatgaagacgacattgggatttatataagtgagatcgaccctaacagcatcgcagccaag
gatgggcgcattcgagaaggagaccgcattatccagattaatggaatagaggtacagaac
cgtgaggaggccgtggctcttctaaccagtgaagaaaacaagaacttttccttgctgatt
gcaaggcctgaactccagctggacgagggctggatggatgaggacagaaacgactttctg
gaccacctgcacatggacatgcttgaagagcagcaccagcaggccatgcagttcacggcc
agcaggctgcagcagaagaagcatgaggaagacgggggcaccacggatacggccaccatc
ctgtccaaccagcacgagaaggacagcggcgtgggacgcacggacgagagcacgcgcaac
gatgagagctcggagcaagagaacaacggcgacgacgccacggcctcgtccaccccgctg
gccgggcagaggaagctcacgtgcagccaggacaccctgggcagcggcgacctgccgttc
agcagcgagtccttcctgtcggccgactgcgcggacgccgactacctgggcatcccggtg
gacgagtgcgagcgcttccgggagctgctggagctcaagtgccaggccaagggcagcagc
agcccgtacagcctgtacctggacgccagcaagagcgaccccgagagcgtggacaaggag
ctggagctgctcaacgaggagctgcgcagcatcgagctggagtgcctgagcatcgtgcgc
gcgcacaagatgcagcagctgcgggagcagtaccgcgagtcgtggatgctgcaccacagc
ggcttccgcaactacaacaccagcgtggacgtccgcaggcacgagctgtcggacatcacc
gagctccccgagaagtcggacaaggacagctcgagcgcctacaacacgggggagagctgc
cggagcaccccgctcaccctggagctgtcgcccgacaactccctgcgcagggctgcggag
ggcggcgcggaagcttacgggccggccgcccccaagagcctgctctccatcaccgaggat
gccgaggcgggcggcgccgggctcggccctgcggccccgcgggagctggaggccggcccg
gccccggagcgggagcgggagcggcggcccggcgacgacggcgggagccccgggagcccc
gggccgggcggcccctccttcccgcactcgccctacaagcacgcgcacatcccggcgcac
gcgcagcactaccagagctacatgcagctcatccagcagaagtcggccgtggagtacgcg
cagagccagatgagcctggtgagcatgtgcaaggacctggcccccgccggcgcggccgga
gcccgcctggagtggaaggtcaaggtgcgcagcgacggctcgcgctacatcaccaagcgg
ccggtgcgcgaccgcctgctgcgcgagcgcgcgctcaagatccgcgaggagcgcagcggc
atgaccacggacgacgacgcggtgagcgagctgaagctgggccgctactggagccgcgag
gagcgcaagcagcacgtggtgaaggccaaggagcagcggcggcggcgcgagttcatgatg
cagagccggctcgagtgcctgcgcgagcagcaggcggccgacgaccgcagggaggtgagc
atcctggaactgagccacaagaagatgatgaagaagaggaacaaaaagatatttgacaac
tggatgacgatccaagaactcctgacccacggcacgaaatccccggatggcacgagagtc
tacaattccttcttatccgtgactactgtataa
DBGET
integrated database retrieval system
