KEGG   Vulpes lagopus (Arctic fox): 121495143
Entry
121495143         CDS       T07435                                 
Symbol
MDC1
Name
(RefSeq) mediator of DNA damage checkpoint protein 1 isoform X1
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
vlg  Vulpes lagopus (Arctic fox)
Brite
KEGG Orthology (KO) [BR:vlg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vlg03400]
    121495143 (MDC1)
DNA repair and recombination proteins [BR:vlg03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    121495143 (MDC1)
SSDB
Motif
Pfam: BRCT_2 FHA RTT107_BRCT_5 BRCT Yop-YscD_cpl
Other DBs
NCBI-GeneID: 121495143
NCBI-ProteinID: XP_041618356
LinkDB
Position
1:72588531..72602329
AA seq 1910 aa
MEDTQAINWEVEEEEETERPSEALGRGLEPVGRLHIFSSAHGPEKDFPLYLGKNMVGRMP
DCSVTLPFSSISKQHAVIEILAWDKAPVLQDCGSLNGTQVLRPPKVLSPGVSHRLRDQEL
ILFADLPCQYHRLNVPLPFVSRGPLTVEETPRVQGGTQPQGLLLAEDSEEEVDSPSERCV
MKEPRTSPLAAVVPESDEEGPSPAPDGPGPPFAFNLDSDTDEEESQHSAAGEASLSARRG
STAETEQLKAMTPATQLGKDQCSVKERNNNIKVERDARNGVVSLGGILERNQSAGEDSDT
DVDESRPPVRPAEVHLERAQPSEFIDSDTDVEEERIPATPAVVPMKKRQIFHRVSTKSLQ
EPALVHLQENPAGSDTDVEESEIQPAVPLERNQISMVIDSNTDDEEEVLAALTLARLKES
GSDTWNRGTDVEEDRAQPVALLEQSQTSAGRDSKTDMEEEGLPMENRRTVPKCPTDKACS
EKRQFSLQDSDLEVDKSLLEVHLERNQASATIDITQVEEKVLPGPAVILVEKHQVPVVWT
NQTNVEVEGDQAKLPVMHLGEPQPPLSEDCGTDVEEDTSLAASLVADTGKHQLLAEGDAG
TESAAPVLEQERVLEARAQGDSLVSQVEQDLLPVSKENLIDQVVDTGTSGETIQPQREGA
QTPTERKREPHVDRTKNSGDNHGDSEDLDLQATQCFVERENQSPEAVQNMEDEATQAFLA
TLPQESGPFCYSFQASGALDEPWEVLATQPFCPRESEAPEPQPIAAHIDAHGSCPSTPRT
APQAQHPESPVHAEPLGIQGRGMQTVEKDMGTPREAPEEVAPERGPLDRETKKLPAGERE
DVLGEELTRGIRVLARDNQEQESDQKVESASTERNMESLNIEIEVPREAQEKETEKQSIA
REIFEREAEKPVLEREGEPSGLGMKVPEVKLERGPQRGEIEKGSQDQEGQASSLTPEPSA
GMGAQQGLASVPGASGSQSGGAPMSPSRQERGHLTCKAPPAEKASVGDQESADAHLPAAV
PEASTPHHNPLLSQSQKHPVSQPFLSSSPSSLEPIPRTRQNGNQEVPGTPLSSEMEPLYP
KSRVRLRGSSRKALSAISSLALEPHSTIPTDQPLCPEPTSRVTRGRTRRSSLKTPELLVP
EVQPSTSKDQSVTAEPISQGRTRKSVKTPEPVVSTATQSRALRSSVKTPKVDISTTPALQ
PSTSKDQPVTPEPTSQVTWGRTRRSSVKIPEPTVPTAPALQPSTSEDQSVITEHTSGGTH
SRTRRSSVKTPEPIVPTAPEVQPTISKDQPVTPEPTSPITWGRTRRSSVKTPEPTVPTAP
ELQPSTSKDHSVITEPTSGATHSRTHRSSLKTPKPTVPTATELQPTTHKGQPVTPKRISQ
GRTPKSSSKTPTSVVSTVPELQACTPTDQPVTPKLAFQATRGRTQRSSIKTPEPVAPTVP
EPQPSISTDQPVTPEPTSRATRGRTHRSFVKMLQPIEPTAPDLESVTPTDQLFSPKVQGS
QGKMLRSSTISAVPVLTTPEFQPSVPTDQPIPPEPISQANCSRRLRATRNHKSLIAPIIC
EPYSALPEPKSRSSRNQRQRAVRAVESLRTIPKPAFAQLPEAPTHATQIHKLEAAGRSEF
TLGPQPKASQSHKRPLATVDSPPPQKRHQRGEVTQETVFLKEEEEDPMERPREEEDVVVP
GPGKRKRDQAEEEPKGIPSRSLRRTKPNQESTSPKVLFTGVVDARGERVVLALGGSLASS
VAEASHLVTDRVRRTVKFLCALGRGIPILSLDWLHQSRKAGCFLPPDEYVVTDPEQEKNF
GFSLRDALSRARKQRLLEGYEIHVTPGVQPPPPQMGEIISCCGGTVLPSMPRSYKPQRVV
ITCSQDFPRCSIPFRIGLPILSPEFLLTGVLKQEAKPEAFIFSTLEMSSS
NT seq 5733 nt   +upstreamnt  +downstreamnt
atggaggacacccaggctatcaactgggaggttgaagaagaggaggagacagagagaccc
agtgaagccttggggcgtggcttagagcctgtagggcggttgcatatcttcagtagtgcc
catggaccagaaaaagattttcccctgtatcttgggaagaatatggtaggccgaatgcct
gattgctctgtgaccctgcccttttcatccatctccaaacaacatgcagtcattgaaatc
ttggcctgggacaaggcacctgtcctccaagattgtggcagcctcaatggtactcaagtc
ctaaggcctcctaaggtcctaagcccaggggtgagtcatcggctgagggaccaggagttg
attctctttgctgacttgccctgccagtaccatcgcctgaatgtccccctgccctttgtt
tcccggggccctctaactgtagaagagacacccagggttcagggaggaactcaaccccag
gggctcctgttggctgaggactcggaggaggaagtagattctccttctgaaaggtgtgtg
atgaaagaaccaaggacctcccctttggcagcagtagttccagagagtgatgaagagggg
ccttctcctgccccagatggccctgggccaccttttgccttcaacctggacagtgacaca
gatgaggaagaaagtcagcattcagcagcgggagaggcctccttatctgccagaagaggc
tccactgcagaaacagaacagctgaaagctatgacacctgcaacccagcttggaaaggat
cagtgttcagtgaaggagaggaacaataacataaaagttgagagggatgcaaggaatggg
gtggtctcacttggggggattctggagagaaaccaaagtgctggggaggacagtgacaca
gatgtggatgagagcaggcctccagtaaggcctgctgaagtccatttggaaagggcccaa
ccttctgaattcatagacagtgatactgatgtggaagaagaacggatccctgcaacacca
gctgtagttcctatgaagaagaggcaaatcttccacagagttagtacaaagagtcttcag
gaacctgctttggtacatctacaggagaacccagctggtagtgatacagatgtggaggaa
agtgagatccaaccggcagtccctctggagagaaaccaaatttccatggtgattgacagc
aatacggatgatgaggaagaagtcttagcagcactcactttggcacgtctgaaagagagc
ggatctgatacatggaacagaggtacagatgtggaagaggacagggcccaacctgtggcc
cttctggagcaaagccaaacctctgctgggagagatagtaagacagacatggaggaggag
ggtctcccaatggaaaacagaagaactgtgcccaagtgtcctacagacaaggcatgctca
gaaaagaggcaattttctctccaagacagtgatctagaggtagataagagcttacttgag
gtccacctggagagaaatcaagcctctgccaccatagacatcacacaagtggaagagaaa
gtcctaccaggaccagctgttatacttgtggagaagcatcaggtgcctgtggtatggaca
aatcaaacaaatgtggaagtagaaggggaccaagcaaagctgcctgtgatgcacctaggg
gaaccccagcctcctctatctgaggactgtgggacagatgtggaggaggacacatcctta
gcagcctcactggtggcagatactggaaagcaccagcttctagcagaaggggatgctggg
acagaatcggctgcaccagttcttgagcaggagagagttcttgaggcgagggcccagggg
gattcacttgtatcacaggtggagcaagatcttctccctgtctcaaaggagaaccttata
gatcaggtggtggacacaggcacttcaggagaaaccatccaaccacagagagagggagcc
cagacccccacagaaaggaagagggaaccacatgtggacaggaccaagaactctggagac
aaccatggtgattctgaagacctggacctacaggctacccagtgttttgtggagagagag
aatcagagcccagaagcagtccagaacatggaggatgaagccactcaggccttcctggct
actctaccccaagagtctggccctttctgttacagcttccaggcctcaggtgccctggat
gagccgtgggaagtcttggcaacacagccattctgtccaagagagtctgaggcccctgag
ccccagcccattgctgcccacattgatgcccatggatcttgcccctctacacctaggaca
gcaccacaagcccaacatccagagagcccagttcatgcagagccactggggattcaaggc
agagggatgcagactgtggagaaagacatgggtacaccaagagaagcaccagaggaggtg
gcccctgagagaggcccattggacagggaaaccaagaagctgccagcaggagagagagaa
gatgtgttaggagaagagttaactagagggatacgggtgttagctagagataatcaggaa
caagagtctgaccaaaaggtggaaagtgcaagtactgaaaggaacatggagagtttaaac
atagaaattgaggtacccagggaagcacaagagaaagagacagaaaagcagtctattgca
agagaaatatttgagagagaagcagagaaaccagtactagagagagagggtgagccaagt
ggattaggcatgaaggtaccagaagtaaaactggagagaggcccacagagaggggagata
gagaaagggagccaagaccaggaagggcaggcctccagtctaacaccagagcctagtgca
gggatgggggcccagcagggacttgcttcagtcccaggagcttctgggagccagtcaggt
ggagccccgatgagccccagcaggcaggagagaggccacctgacttgcaaggcaccacct
gctgagaaggcctctgtgggtgatcaggaatccgcagatgctcatctgcctgctgcagtg
cctgaagcttcaaccccacaccacaaccccctcctctctcagagtcaaaaacatcctgtg
tctcagcccttcctttcttcctctccatcttctttagagcccattcccaggaccaggcaa
aatgggaatcaggaagttccagggactcctttatcctcagagatggagcctctgtatcca
aaatccagagtcaggctccgagggtcctccaggaaggcactctctgcaatttcttcttta
gcccttgaacctcactcaaccatccccacagaccagcccctctgtcctgagcccacatct
cgggtcactcggggcaggacacgtaggtcctctctcaagacccctgaactccttgtccct
gaagtccagccttccacctccaaagaccagtctgtcactgctgagcccatatctcaaggc
aggacacgtaaatctgtcaagactcctgaaccagtcgtctccacagccactcagagcagg
gcacttaggtcttctgtcaagactcccaaagtagacatctccacaacccctgcgctccag
ccttctacttccaaagaccagcctgtcacccctgagcccacatctcaggtcacttggggc
aggacacgtaggtcctctgtcaagatccctgaaccaactgtccccacagcccctgcactc
cagccttccacctctgaagaccagtctgtcatcactgagcacacatctgggggcactcac
agcaggacacgtaggtcttctgtcaagactcctgagccaattgtcccaacagctcctgaa
gtccagcctactatctccaaagaccagcctgtcacccctgagcccacatctccgatcact
tggggcagaacacgtaggtcctctgtcaagacccctgaaccaactgtccccacagctcct
gaacttcagccttctacctccaaagaccattctgtcatcactgagcccacatcaggagcc
actcacagcaggacacacaggtcttctctcaagactcctaagccaactgtccccacagcc
actgagctccagcctaccacccacaaaggccagcctgtcacccccaaacgtatatctcag
ggcaggacacctaagtcttctagcaagactcccacatcagttgtctccacagtccctgag
ctccaggcttgcacccccacagaccagcctgtcacccccaaacttgcatttcaggccact
cggggtaggacacaaaggtcctctatcaaaacccctgaaccagttgcccccacagtgcct
gaaccccagccttccatctccacagatcagcctgtcactcctgagcccacatctcgggcc
actcggggcaggacacataggtcctttgtcaagatgctccagccaattgaacccacagcc
cctgatcttgaatctgtcacccccacagatcaactgttctcccccaaggttcagggaagt
cagggtaagatgctaaggtcttctacaataagtgctgtgccagttcttaccactcctgaa
ttccagccttctgtccccacagaccagcctattccccctgagcccatctctcaagccaat
tgcagcaggaggctgagggccactaggaaccataagtcccttatagctcccattatctgt
gagccctactctgcactccctgaacctaaatctcggtcctcaaggaaccaaagacaaaga
gcagtgagagcagttgagtccctcaggaccattcccaagccggcctttgcccagcttcct
gaagcccccactcatgctacccagatccacaagttggaggcagcaggcagatctgagttc
accctggggccccaacctaaggcctctcagagccacaagaggcctttggctactgtggat
tcacccccacctcaaaaacggcaccaaagaggagaagtcacccaggagacagtgttcctc
aaggaggaggaagaagatccaatggagaggccaagggaggaggaggatgtagtggttcca
ggaccaggcaagcgaaagagagaccaagcagaggaggagcccaagggaatcccaagccgc
agtcttagacgaaccaaacctaaccaagagtccacatcccccaaagttctcttcacagga
gtggtggatgcccgtggtgagcgggtagtgctggccctcggggggagtctggccagctca
gtggcagaggcttcccacttggtgactgatcgagtccgccgtacggtcaagttcctgtgt
gccctggggcgggggattcccatcctctccttggattggcttcaccagtcccgcaaggct
ggttgctttttgcccccggatgaatatgtggtgactgatcctgagcaggagaagaacttt
ggcttcagccttcgagatgccctgagccgggctcgaaagcaaaggttgctggagggctat
gagatccatgtgactccaggagtccagccaccaccacctcagatgggagagatcatcagc
tgctgtggaggcactgtactacccagcatgccccggtcttataagcctcagagagttgtg
attacatgctcccaggacttccctcgatgctctattccgtttcggattgggctgcccatc
ctctcacctgagttcctgctaacaggagtgctaaagcaggaagccaagccagaggcgttc
atcttctccactttggaaatgtcatcctcctga

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