Vulpes lagopus (Arctic fox): 121495534
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Entry
121495534 CDS
T07435
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121495534 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vlg03041
]
121495534 (DDX46)
Enzymes [BR:
vlg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121495534 (DDX46)
Spliceosome [BR:
vlg03041
]
Complex A
U2 snRNP components
U2 related factors
121495534 (DDX46)
Complex B
121495534 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
KH-I_KHDC4-BBP
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
121495534
NCBI-ProteinID:
XP_041619034
LinkDB
All DBs
Position
7:complement(109603858..109677345)
Genome browser
AA seq
1032 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRS
RSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKAENRSRS
KEKTDSGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAME
NIGELKKEIEEMKQGKKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVK
KFNMRSVKGGGGNEKKSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEE
VDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGI
TVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGS
GKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVY
GGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFE
PQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVI
EEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDS
IINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAY
TFITEDQARYAGDIIKALELSGTAVPPDLEKLWSDFKDQQKAEGKIIKKSSGFSGKGFKF
DETEQALANERKKLQKAALGLQDSDDEDAAVDIDEQIESMFNSKKRVKDMAAPGTSSVPA
PTAGNAEKLEIAKRLALRINAQKNLGIESQVDVMQQATNAILRGGTILAPTVSAKTIAEQ
LAEKINAKLNYVPLEKQEEERQDGGQNESFKRYEEELEINDFPQTARWKVTSKEALQRIS
EYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELIRLQNS
YQPTNKGRYKVL
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgggccgggagtcacgccactatcgaaagcgatcagcatcaaggggacgctctggaagt
cgttctagaagtcgctcaccctcagacaaaagaagtaaacgtggagatgacagacggtct
agaagcagagatagagatagaaggagagagaggtctcgtagcagagataaaagaagatct
cggtcaagagaccggaagcgcctgaggcgttccagaagtagagagagagacagaagtcga
gagcgaagaagatctcgaagtcgagacaggagacgctcaaggagtagaagccgaggccgg
cgatccagatcctccagtcctggcaataaaagcaagaaagctgagaataggtctagatcc
aaagagaaaacagatagtggggaaagttctaaagagaagaaaaaggacaaagatgacaag
gaggatgaaaaagaaaaagatgctggcaattttgatcagaataagttggaagaagaaatg
agaaagcgaaaagaaagagttgaaaagtggcgagaagagcaacgtaaaaaggccatggaa
aacataggagaactgaaaaaggaaattgaagagatgaaacaagggaaaaaatggagttta
gaagatgatgatgatgatgaagatgatcctgcagaagctgaaaaggaaggaaatgaaatg
gaaggtgaggagttagatccattagatgcttacatggaagaagtaaaagaagaagtaaag
aagtttaatatgagaagtgtgaaaggtggtgggggaaacgaaaagaagtctgggcctaca
gtcaccaaagttgtcactgttgtaacaaccaaaaaagcagtggtagattctgataagaag
aaaggtgaactgatggagaatgaccaggatgccatggagtattcttcagaggaggaagaa
gttgatcttcagacggctcttacaggctatcagacaaaacagagaaagcttctagaacca
gtggaccatggaaaaattgaatatgaaccattcagaaaaaacttttatgttgaagttcca
gaattagcaaaaatgtctcaagaagaggtaaatgtatttcggttggaaatggagggcatc
actgtcaaaggaaaaggttgtcccaaaccaattaaatcttgggtccagtgtggaatttcc
atgaagatcttaaattctctcaaaaagcatggctatgaaaagcccacaccaattcagacc
caggcgattcctgctataatgtccggacgagatttgattggtattgccaagacaggaagt
ggaaagaccattgcttttctgttacccatgtttagacacatcatggatcagaggtcatta
gaagaaggagaggggccaatagctgtcatcatgactccaactcgagaactggctttacaa
attactaaagaatgtaagaagttttcgaagaccctgggacttagagtggtttgtgtttat
ggaggaacaggaatcagtgagcagattgctgagctgaaaagaggtgctgaaattattgtt
tgcacacctggtcgaatgattgacatgttagcagctaacagtggtcgtgtcacgaatctt
cgaagagtgacatatgttgttttagatgaagcagacagaatgtttgacatgggttttgaa
ccacaggtcatgcgcattgtggataatgtccgtcctgatcgacagacagttatgttttca
gctacttttcccagagctatggaggctttggctcgcagaatcctgagtaaacccattgaa
gtgcaggttggaggcaggagtgtggtttgctcagatgtagagcaacaagtgattgtgatt
gaagaagaaaagaaattcttgaagttgcttgagcttcttggccattatcaagaatcagga
tctgttattatatttgtggataagcaagaacatgctgatggtcttctgaaagatttaatg
agagcatcttatccttgcatgtctcttcatggaggcattgatcaatatgacagagatagc
atcataaatgactttaagaatgggacgtgcaaacttctcgtagctacttctgttgctgcc
cgaggtctagatgtgaaacatctgattcttgtagtaaattacagctgccccaaccattat
gaggattatgtgcacagagcaggacggactggaagagcaggcaataaaggttatgcatat
acttttatcacagaagatcaagctcgctatgccggtgacataattaaagcgcttgaatta
tcaggaactgcagtgcctccggatctggagaaactttggagtgatttcaaagatcaacag
aaagctgaagggaaaataattaaaaagagtagtgggttctctggtaagggattcaagttt
gatgaaacagaacaagctttggctaacgagaggaagaagttgcaaaaagcggctcttggt
ctgcaagactcagatgatgaggatgctgcagttgatattgatgaacaaattgaaagcatg
tttaattcaaagaagagagttaaagatatggctgctcctggaacatctagtgtccctgct
ccaactgcaggaaatgctgagaaattagaaattgctaagagattggctcttagaatcaat
gctcagaagaatttgggcattgagtctcaggtagatgtgatgcaacaggctaccaatgca
attctcagaggtggcaccatcctggctcccactgtgtctgccaaaaccattgcagagcaa
cttgctgaaaagatcaatgccaagctcaattatgtgcctttggagaaacaagaagaggaa
agacaggatggtggacaaaatgagtcttttaagagatatgaggaagaattagagatcaat
gacttcccacagactgctagatggaaagttacttctaaggaagctctgcaaagaatcagt
gaatattctgaagctgcaattacaatcagaggaacgtatttcccacctggcaaagaaccg
aaggaaggagagcggaaaatttacttggcaattgaaagtgccaatgaactggctgtgcag
aaagcaaaggcagaaatcaccaggcttataaaagaagaactgattcggctgcaaaattca
taccaaccaacaaataaaggaagatacaaagtcttataa
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