Vulpes lagopus (Arctic fox): 121495931
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Entry
121495931 CDS
T07435
Symbol
SHOC1
Name
(RefSeq) protein shortage in chiasmata 1 ortholog
KO
K28108
shortage in chiasmata 1
Organism
vlg
Vulpes lagopus (Arctic fox)
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vlg03036
]
121495931 (SHOC1)
Chromosome and associated proteins [BR:
vlg03036
]
Eukaryotic type
Meiosis-specific proteins
Others
121495931 (SHOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
121495931
NCBI-ProteinID:
XP_041619967
LinkDB
All DBs
Position
7:66414023..66491365
Genome browser
AA seq
1509 aa
AA seq
DB search
MFSAFKYCAIDYLYETIVRKKFHRDALLLRIPSCLYQDGNYYGEVIDDKFRRPWTRVSAV
SVWGMTDTSVLDQWKASLFVEEFLEKKTVTGMMTETDYGFEEIVPSSNPNSPMEIEEASL
YTDTDYNEVFTPIGGLEKCSTLQTQDKDLYIDEEILFVNNLMSYKSQLPTVHTLLSRLKP
FLIKDPILDFKEQVFTEANFFREHFSFQGDLKSLVKEDFYMHKENFCQEKLEDTVGLNET
PSILSECELLISTSSKQEADIPSLSELKESLNLVPEIINYADENELFKRDLTAKHGSDIE
DIKCSSTEILAIQSHREPEYSEPVELEMPLTHLRLTNQPSSVTSLCTRLQTFPFSPVCKI
NLLSAEESAHKYWMMWQLESCRSSLNPFLFTVPRTEEPRSQCSVTDLKKIFSIEEESLVV
NPISTERWKEGGLNLIETETLELLNTYLSGNDLSSSDTTMEIFLPTKLLQLESSLEHKSC
SSPIELIDEKSTNDHLLLSQNISSPAKEVPDLCFSDDNLSVKQPTKEENPKNDLEPVYRI
SQNKENEDYLELDCTVPSDELSSSPKIEKASFKHGKKWEDDLDLLSDFIMLRNKYKTCTS
KTEVTGNKENDDKEEPSLTLQEASPIVCTHKALEKINQERRADNVIEIQASDSQCQAFCL
LEAAATPILKKLECLCTLPAADWTFATVIFDQTRFFLKEQEKVISDAIQQGTNHEKEMTF
KHAALLHLLVTIRDVLLTCGLDTALGYLSTAKDIYRNILGSYLDDIWRQLEIVQFIREKN
PETNYKIQELQCQILNWMQSEQQIKVLIIIRMDSDGEKHLLIKILNKMEGLTLTVIHSNK
RKDVLESEGVLNGTSSCIIVHNQHIGADFPWTDFSFVVEYNFGENSCWTEHCKKLNIPHR
AFKVILPDTVLKRSTLLDSFGGFLLEIQVPYVFFASEGLLNTPEILQLLESKYNITLVER
CCSESLKLFGGTECYVVVTIDEHTAVMLQDLEELNCEKASDNIIMRLLALSFQYSYCWII
LYTKKTLNSEYHLTEKTLHHLALIYAALVSYGLKSEELVVKLIIAPGVEEAALIIRQIAD
HNLMTSKRDPQEWLDKSWVEVSPSKEEMYLLDFPSINPLVAQLMLNKGPSLHWILLATLG
QLQELLPEVPEKVLKHFCSITSLFKISSSSITNSPQSPSPQENGNQTNTFTSQSSASGSS
NSVFQEHNEFYHYSDIGETVYEDTNSTSNSKSSLMELREMPCVLPPMTSYSQASYWKDSS
CNANIVHNPFLINTESRTVTGNSFQNQNDSESDVFYLDLTQMSCENITSPIDTQKRVAPN
FISYQEKGTHDAKGPIKKGAYASNFSVEGAQSPLPWNFKKNVWKQQNHSFNLDYGADQTT
CDKWFSQKDNLFTNQQKYPSDELEGFIYESSNDETKKTFSKELPSVPSLDFFCAADPNVN
QKEFSSLYFHQGAGKCLGQKRHSESSSNSGDKKSLPDFMCSQLPQFKKRRLVYEKVPGRA
DGQTRLRFF
NT seq
4530 nt
NT seq
+upstream
nt +downstream
nt
atgttttcagcattcaaatattgtgcaatagactatttatatgagactatagttagaaag
aagtttcacagagatgccttactgcttcgaatcccttcatgtttatatcaagacggaaat
tattatggagaagttattgatgacaagtttaggaggccatggacgagagtttcagctgtt
tcagtgtggggaatgacagatacctctgtcttggatcaatggaaagcaagtctctttgtg
gaggagttcctagagaaaaaaacagttacaggaatgatgaccgagactgactatgggttt
gaggaaattgttccaagttcaaacccaaactctccaatggaaatagaggaagccagttta
tatactgatacggactataatgaagtctttacacctattggcggtttagaaaaatgttca
acacttcaaacacaggacaaagatttatatattgatgaagaaatactttttgtaaataac
ttgatgtcatataaaagtcagctaccaactgtgcatactctgttgagtaggctaaaacca
tttttgataaaggaccccattttagatttcaaagaacaggtcttcacagaagctaatttc
ttcagggaacatttctcatttcaaggagatttgaaaagtcttgtgaaagaagatttttac
atgcataaagagaacttttgtcaggaaaagctagaagatacagtaggtttaaatgaaact
ccatcaattttgtctgagtgtgaactcttaatatctacaagctccaaacaagaagctgat
attccatcactctccgaactgaaggaatcattaaacttagttccagaaataataaattat
gcagatgaaaatgaacttttcaaaagagatcttactgccaagcatggaagtgacattgag
gatataaaatgcagctccacagaaattttggccattcaaagccatcgtgaaccagagtat
agtgaaccagtggagttagaaatgccattaactcatctacgtctaacaaaccaaccttct
tccgtgacttcattatgtacaagacttcagacatttccattttctcctgtttgtaaaatt
aatttgctttctgctgaagaatcagctcacaagtactggatgatgtggcagttagaaagc
tgcagaagctctttgaacccatttttgtttacagtgccaagaactgaagagccccgcagc
caatgttcagttacagatttgaaaaagatattttctattgaagaagaaagccttgtagtt
aatcctataagcacagagcggtggaaagaaggaggactaaatctgatagaaacagaaact
ttggaacttctgaatacatatttgtctggtaatgatttatcttctagtgatactacaatg
gagatatttttgccaacaaaactacttcaattagaatcatcattagaacataaaagttgt
tcctcacctattgaacttattgatgagaaatctacaaatgatcatttattactttcacaa
aatatttcatctccagcaaaagaagtaccagacttgtgtttttctgatgataatttatct
gttaagcaaccaacaaaagaagaaaacccaaagaatgatctagaaccagtttatagaata
agccaaaataaagaaaatgaagattacttggaacttgactgcacagtaccatctgatgaa
ttatcttcctctccaaaaattgaaaaagcatcttttaaacatggtaaaaaatgggaggat
gatttggatcttttgagtgactttattatgctgagaaataaatataagacttgtacctcc
aagactgaagtcacaggcaataaagaaaatgatgataaagaagaaccttctttgactctt
caggaagcaagtcctattgtttgtactcataaagctctagagaaaataaatcaggaaagg
agagcagataatgtcattgaaattcaagcatcagatagccagtgccaagcattctgtctc
ctagaagcagcagctactcctatcttaaaaaagcttgaatgcctctgtactctccctgct
gctgattggacatttgccactgtcatttttgaccaaacaaggttcttcttaaaggagcaa
gaaaaagtaataagtgatgctattcagcaaggtacaaaccatgaaaaagaaatgacattt
aaacatgctgctctcttacatcttctggtaacaattagagatgtccttttaacgtgcggt
ttggacacagcattgggatatttgtcaactgcaaaagatatctacagaaacattttaggc
tcctatttggatgacatttggagacaattggagattgtacagtttattagggaaaaaaat
cctgaaaccaactacaagatacaagaactgcaatgtcagatactaaattggatgcaaagt
gaacaacagattaaggtgctgattataataagaatggactcagatggtgaaaaacattta
ctcataaaaattcttaacaaaatggaaggtttaacattgactgtcatacattcaaacaaa
aggaaagatgttctggaatctgaaggtgttttaaatggtacaagttcctgcataattgta
cataatcagcatattggagcagatttcccatggactgacttttcatttgtggtggaatac
aattttggagagaactcctgttggaccgaacactgcaagaaattgaatattcctcacagg
gccttcaaagtgattcttccagacacagttttaaagagaagtaccttgctggatagtttt
ggtggttttcttctggaaattcaggttccatatgtgttttttgcatctgaaggacttctt
aatactccagaaatacttcagttgctagaatccaaatataatatcacactagtggaaaga
tgctgcagtgagtcattgaaactctttggaggtacagagtgttatgtggtggtgacaatt
gatgaacacactgccgtaatgttgcaggacctagaagaattgaattgtgagaaggcatca
gacaatatcattatgagactgttggcattatcattccagtacagctattgttggataatc
ttatataccaaaaaaacattaaactcagagtaccatcttacagaaaaaacacttcatcat
ctagcactgatttatgcagctttggtatcatatgggctaaaatcagaagaactggttgta
aagcttataattgctccaggagtggaagaggctgcactgataattcgacaaattgctgat
cacaatttaatgacctcgaagagagatcctcaagaatggttggataaatcctgggttgaa
gtttcaccatcaaaggaggaaatgtacttacttgattttccatctattaacccactggtg
gctcagctcatgttaaataaaggaccttcactgcactggatattattagcaactctgggt
caacttcaggagcttttacctgaagttccagaaaaagtgttaaagcatttttgcagcatc
acttccttattcaagattagttcttcgtccataacaaactcacctcaaagtccatcacct
caggaaaatgggaatcagactaatacctttacctcccagagttcagcttctggctcttca
aactctgtctttcaagaacataatgaattttaccactattcagacataggagagacagtg
tacgaagatacaaacagcacttcaaactctaagtcttcccttatggaactaagagaaatg
ccatgcgttttaccacctatgacttcttacagtcaagccagttactggaaagattccagt
tgtaatgctaacatagtacataatcctttcctgattaatacagaatcaagaactgtgact
ggtaactcctttcaaaaccagaatgattcagagtcagatgtcttttatttggatctaaca
caaatgagctgtgaaaacataacatcaccaattgacactcagaagagagttgcccctaat
tttataagttatcaggaaaagggaacacatgatgcaaaagggcctataaaaaaaggagca
tatgcctctaacttttctgtagaaggcgctcaatctcctcttccctggaactttaagaaa
aatgtatggaaacaacagaatcactcattcaacttagactatggtgcagatcagactaca
tgtgacaaatggttctctcagaaagataatttattcactaatcagcaaaaatatccatcg
gatgagttagaaggcttcatatatgaaagttcaaatgatgagactaaaaagactttctca
aaagaattaccatctgtccctagtttggatttcttttgtgctgctgatcctaatgtaaat
caaaaagaattcagcagtctttatttccaccaaggagctggaaaatgtttaggacagaaa
aggcactctgaatcctcatctaactcaggagacaagaaatcattaccagatttcatgtgc
tcacaactaccacaattcaaaaaacggcggctagtgtatgaaaaagtccctggtagagct
gatggacaaactcgtctgaggtttttttga
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integrated database retrieval system
