Vulpes lagopus (Arctic fox): 121496199
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Entry
121496199 CDS
T07435
Symbol
HMG20B
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related
KO
K24650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related
Organism
vlg
Vulpes lagopus (Arctic fox)
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vlg03000
]
121496199 (HMG20B)
03036 Chromosome and associated proteins [BR:
vlg03036
]
121496199 (HMG20B)
Transcription factors [BR:
vlg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TOX
121496199 (HMG20B)
Chromosome and associated proteins [BR:
vlg03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
121496199 (HMG20B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
DUF4763
MlaC
DASH_Duo1
PI3K_P85_iSH2
Motif
Other DBs
NCBI-GeneID:
121496199
NCBI-ProteinID:
XP_041620477
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All DBs
Position
7:2362787..2367843
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AA seq
317 aa
AA seq
DB search
MSHGSKQPGAAAAPAGGKAPGPHGGFVVAVKQERGEGPRAGEKGSHEEEPVKKRGWPKGK
KRKKILPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPAEKQRYL
DEAEREKQQYMKELRAYQQSEAYKMCTEKIQEKKIKKEDSGSGLMNTLLNGHKGGDCDGF
STFDVPIFTEEFLDQNKAREAELRRLRKMNVAFEEQNAVLQRHTQSMSSARERLEQELAL
EERRTLALQQQLQAVRQALTASFASLPVPGTGETPTLGTLDFYMARLHGAIERDPAQHEK
LIVRIKEILAQVASEHL
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgtcccacggctccaagcagcccggcgcggccgccgcgccggcgggcggcaaggctccg
ggaccgcacgggggcttcgtggtggccgtcaagcaggagcgcggcgagggcccccgggcc
ggcgagaaggggtcccacgaggaggagcccgtgaagaagcgcggctggcccaagggcaag
aagcggaagaagatcctgccaaatgggcccaaggcaccggtcaccggctacgtgcgcttc
ctgaacgagcggcgcgagcagattcgcacgcgccacccggatctgccctttcccgagatc
accaagatgctgggtgccgagtggagcaagctgcagccggcggagaagcagcggtacctg
gatgaggccgagcgggagaagcagcagtacatgaaggagctgcgcgcctaccagcagtcg
gaagcctacaagatgtgcacggagaagatccaggaaaagaagatcaagaaagaggactcg
ggctctgggctcatgaatacgctcttgaatggacacaagggtggggactgtgatggcttc
tccaccttcgacgtccccatcttcactgaagagttcttggaccaaaacaaagcgcgggag
gcagagctgcggcgcctgcgcaagatgaacgtggccttcgaggagcagaacgcggtgctg
cagaggcacacgcagagcatgagcagcgcgcgggagcgcctggagcaggagctggcgctg
gaggagcggcggacgctggcgctgcagcagcagctccaggccgtgcgccaggcgctcacc
gccagcttcgcctcgctgccggtgccgggcacgggcgagacgcccactctcggcaccctg
gacttctacatggctcggctgcacggcgccatcgagcgcgaccccgcccagcacgagaag
ctcatcgtccgcatcaaggagatcctggcccaggtcgccagtgagcatctatga
DBGET
integrated database retrieval system
