KEGG   Vulpes lagopus (Arctic fox): 121496457
Entry
121496457         CDS       T07435                                 
Symbol
KATNB1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
vlg  Vulpes lagopus (Arctic fox)
Brite
KEGG Orthology (KO) [BR:vlg00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:vlg04812]
    121496457 (KATNB1)
Cytoskeleton proteins [BR:vlg04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     121496457 (KATNB1)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40 Katanin_con80 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 WD40_Gbeta WDR55 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_EML Beta-prop_SCAP WD40_MABP1-WDR62_2nd Beta-prop_DCAF4 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_Aladin NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_WDR41 Beta-prop_EIPR1 Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_VPS8 Beta-prop_IFT140_1st WD40_RFWD3 Beta-prop_HPS5 Beta-prop_RIG_1st RMC1_N Beta-prop_WDR19_1st WDR54 eIF2A Beta-prop_IP5PC_F PROPPIN Beta-prop_LRRK2 Beta-prop_NWD2_C VPS8_N Tricorn_2nd Beta-prop_WDR35_TULP_N Beta-prop_pof12 Beta-prop_ACSF4 Ge1_WD40
Other DBs
NCBI-GeneID: 121496457
NCBI-ProteinID: XP_041620697
LinkDB
Position
8:complement(107777895..107798652)
AA seq 655 aa
MATPVVTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT
GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV
ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK
MMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFN
PDGCCLYSGCQDSLRVYGWEPERCFDVVLVSWGKVADLAVCNDQLIGVAFSQSNVSSYVV
DLTRVTRTGTVAQDPVQDSRPLAQQPAHPSAPLRRIYERPSTACNKPQRVKQNSESERRS
PSSEDDRDERESRAEIQNTEEYNEIFQPKNSISRTPPRRSEPFPAPPEDDMATAKEAAKP
SPATDSQFPVPNLEVLLRPPAVTSTPVPKAEPAIIPATRNEPIGLKASDFLPAVKIPQQA
ELVDEDAMSQIRKGHDTMCVVLTSRHKNLDTVRAVWTTGDIKTSVDSAVAINDLSVVVDL
LNIVNQKASLWKLDLCTTVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDILAAP
PSVGVDISREERLHKCRLCYKQLKSISGLVKSKSSLSGRHGSAFRELHLLMASLD
NT seq 1968 nt   +upstreamnt  +downstreamnt
atggccactcctgtagtcaccaagacagcctggaagttacaggagattgtcgcccacgcc
agcaatgtgtcctcgctggtgctgggcaaagcctctgggaggctgctggctactggtgga
gatgactgccgagtcaacctgtggtccatcaacaaacccaactgcatcatgagcctgacg
ggtcacacatccccagtggagagtgtccgcctcaacaccccagaggagctcatcgtggcc
ggctcccagtcgggctccatccgcgtctgggacctagaagctgccaaaattcttcgcacg
cttatgggccacaaagccaacatctgcagcctggacttccacccatatggcgagtttgta
gcctcgggttcacaggacacaaacatcaagctctgggacatcaggaggaaaggctgtgtc
ttccgataccggggacacagccaagctgtgcgatgcctccggttcagccctgatgggaag
tggttggcatcggctgcagacgaccacacagtgaagctctgggatctgactgctggcaag
atgatgtccgagttccctggccacacagggcctgtcaatgtggtggagtttcaccccaat
gagtacctcctggcttccggcagctctgacaggaccatccggttctgggatctggagaag
ttccaggtggtgagctgcatcgaaggagaaccagggcctgtcaggagcgtcctcttcaac
cccgatggctgttgcctatacagtggctgccaggactcactgcgtgtctacggctgggag
cctgagcgctgctttgacgtcgtcctagtcagctggggcaaggtggctgacctggccgtc
tgcaacgaccagctgataggcgtggccttctcccagagcaacgtctcctcttatgtggtg
gacctgacacgggtcaccaggacaggcacggtggcccaagaccctgtgcaggacagccgg
cccctggcacagcagccggcccaccccagtgcccctcttcggcgcatctatgaacggccc
agcacagcctgcaacaagcctcagagggtgaagcagaattcagagagtgagcgccgaagc
cccagcagcgaggacgaccgggacgagcgggagtctcgggccgagatccagaacaccgag
gagtacaacgagatcttccagcccaagaacagcatcagtcggacaccaccccgaagaagt
gagcccttcccagcaccccctgaggacgacatggccacagccaaggaggcggcaaagccc
agcccagccacggactcgcagttcccggtgccaaatctcgaggtcctactccggcccccg
gctgtcacttccactcctgtgcccaaggctgagcctgccatcatcccagctacccggaat
gagcccatcgggctaaaggcatctgacttcctgcccgccgtgaagatcccccagcaggcg
gagctggttgatgaggatgccatgtcacagatccgcaaaggccatgacaccatgtgtgtg
gtacttaccagccgccacaagaacctggacaccgtgcgggctgtgtggaccacgggtgac
atcaagacatcagtggactcggctgtggccatcaatgacctgtccgtagtcgtggacctc
cttaacattgtcaaccagaaagcctccctgtggaagctggatctgtgcaccacggtcttg
ccgcagattgagaaacttctgcagagcaagtatgagagctatgtccagactggctgcacc
tccctgaagctgatcctgcagcggtttctgcccctgatcactgacatcctagcagcaccc
ccctctgtgggtgtagacatcagccgggaggagaggctacacaagtgccggctctgctac
aagcagctcaagagcatcagtggcctcgtcaagagcaagtcaagtttgagtggccgtcat
ggcagcgccttccgagagctgcacctactcatggccagtttggactga

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