Vulpes lagopus (Arctic fox): 121496536
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Entry
121496536 CDS
T07435
Symbol
CDX2
Name
(RefSeq) homeobox protein CDX-2 isoform X1
KO
K22234
homeobox protein CDX2
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09160 Human Diseases
09162 Cancer: specific types
05226 Gastric cancer
121496536 (CDX2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vlg03000
]
121496536 (CDX2)
Transcription factors [BR:
vlg03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
121496536 (CDX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
121496536
NCBI-ProteinID:
XP_041620846
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All DBs
Position
8:complement(39531485..39539052)
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AA seq
315 aa
AA seq
DB search
MYVSYLLDKDVSMYPSSVRHSGGLNLAPQNFVSPPQYPDYGGYHVAAAAAAAANLDSAQS
PGPSWPAAYGAPLREDWNGYAPGGAAAAANAVAHGLNGGSPASAMGYSSPADYHPHHHPH
HHPHHPAAAPSCATGLLQTLNPGPPGPAATAAAEQLSPGGQRRNLCEWMRKPAQPSLGSQ
VKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAK
ERKINKKKLQQQQQQQQPPPQAPPPAPQPPQPQPGPLRSVPESLSPVSALQGSVPGSVPG
VLGPAAGVLNPTVTQ
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtgagctacctcctggacaaggacgtgagcatgtaccccagctccgtgcgccac
tccggcggcctcaacctggccccgcagaacttcgtcagccccccgcagtacccggactac
ggcggctaccatgtggcggcggcggccgcggcggccgcgaacctggacagcgcgcagtcc
ccggggccctcctggcccgccgcctacggggctccgctgcgggaggactggaacggctac
gcgccggggggcgccgcggccgcagccaacgccgtggcgcacggcctcaacgggggctcg
ccggcctcggccatgggctacagcagccccgccgactaccacccgcaccaccacccgcac
caccacccgcaccacccggccgccgcgccctcctgcgccaccggcttgctgcagacactg
aaccccggccctccggggcccgcagccacggccgccgcagagcagctgtcccccggcggc
cagcggcggaacctgtgcgagtggatgcggaagcccgcgcagccgtccctcgggagccaa
gtgaaaaccaggacgaaagacaaataccgagtggtgtacacggatcaccagcggctggag
ctagagaaggagtttcactatagtcgttacatcaccatccggaggaaagctgagctggcc
gccacgttggggctctccgagaggcaggttaaaatttggtttcagaaccgcagagccaag
gaaaggaaaatcaacaagaagaagttgcagcagcagcagcagcaacagcagccgcccccg
caagccccaccgcctgcaccgcagcctccccagccccagccgggtcctctgagaagcgtc
ccagagtccctgagtcctgtgtccgccctgcagggctcggtgcctggctctgtccccggg
gttctggggccagcggcgggcgtgttaaaccctactgtcacccaatga
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