Vulpes lagopus (Arctic fox): 121496552
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Entry
121496552 CDS
T07435
Symbol
ATG4B
Name
(RefSeq) cysteine protease ATG4B isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg04136
Autophagy - other
vlg04140
Autophagy - animal
vlg04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
121496552 (ATG4B)
04140 Autophagy - animal
121496552 (ATG4B)
04136 Autophagy - other
121496552 (ATG4B)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vlg01002
]
121496552 (ATG4B)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vlg04131
]
121496552 (ATG4B)
03029 Mitochondrial biogenesis [BR:
vlg03029
]
121496552 (ATG4B)
Peptidases and inhibitors [BR:
vlg01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
121496552 (ATG4B)
Membrane trafficking [BR:
vlg04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
121496552 (ATG4B)
Mitochondrial biogenesis [BR:
vlg03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
121496552 (ATG4B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
121496552
NCBI-ProteinID:
XP_041620880
LinkDB
All DBs
Position
8:complement(136172..159468)
Genome browser
AA seq
512 aa
AA seq
DB search
MARRAVRTARWPRRRPGRASPPRALPGAQPPAHVCFRQPDASPSGPRGGRRGPPSCRARG
PGPRRRAPPYAKMADAHFLPHFRPRPRSLGPDWPRRRPVASRCGTVGATRLSVGGRRGKM
DAATLTYDTLRFAEFEDFPETSEPVWILGRKYSIFTEKDEILSDVASRLWFTYRKNFPAI
GGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWTQRKRQPDSYFNVLNAFIDRKDS
YYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFDTWSALAVHIAMDNTVVMEDIRR
LCRGSLPCAGAAALPADSSRHCNGFPAGAEVTNRPAPWRPLVLLIPLRLGLTDINEAYVE
TLKRCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVEFTDSCFIPDESFHC
QHPPSRMSIGELDPSIAVGFFCKTEDDFDDWCQQVRQLSLLGGALPMFELVEQQPSHLAC
PDVLNLSLDSSDVERLERFFDSEDEDFEILSL
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgccgggccgtccgtacggcaagatggccgcgccgacggcccgggcgcgctagc
ccgccgcgcgccctccccggggcccagccgcccgcccacgtctgcttccgccagcccgac
gcgtcgccgtcgggcccccggggcggacgccgcgggccgccgagttgccgagcgcgcggg
cccggccctcggcgtcgcgccccgccgtacgccaagatggcggacgcgcacttcctcccg
cacttccggccccgcccgcgctcgctgggcccggattggccccggcggcggcccgtcgcg
tcgcgctgcggaaccgtcggagcgacgcggctctcagtcggcggccggagagggaagatg
gacgcagctactctgacctacgacactcttcgatttgctgaatttgaagatttcccggag
acctcagagcctgtgtggatactgggtagaaaatacagcattttcacagaaaaggatgag
atcttgtccgacgtggcatccaggctttggtttacatacaggaaaaacttcccagccatc
gggggaaccggccccacctcggacacgggctggggctgcatgctgcggtgcggacagatg
atcttcgcccaggccctggtgtgccgccacttaggccgcgattggaggtggacacagcgg
aagaggcagccggatagctacttcaacgtcctcaacgcgtttatcgacagaaaggacagt
tactactccattcaccagatagcgcaaatgggagttggcgagggcaagtccatcggccag
tggtacgggcccaacactgtcgcccaggtgctcaagaaactggctgtcttcgacacctgg
agcgccctggcggtccacatagccatggacaacacggtggtgatggaggacattagaagg
ttgtgcaggggcagccttccgtgtgcgggggccgccgcgcttcctgcagattccagccgc
cactgtaacgggttccctgctggggccgaggtcaccaacaggccggccccgtggagaccc
ctggtgctgctcatccccctgcgcctggggctcacagacatcaacgaggcctacgtggag
accctgaagcgctgcttcatgatgccccagtccctgggagtgatcggagggaaacccaac
agcgcccactacttcatcggctacgttggtgaagagctcatctacctggatccccacacg
acgcagccggcggtggagtttaccgacagctgcttcatccccgacgagagcttccactgc
cagcacccgcccagcaggatgagcatcggggagctcgacccgtccattgctgtggggttc
ttctgtaagaccgaggacgacttcgatgactggtgccaacaagtcaggcagctgtcgctg
ctcggaggcgccctgcccatgttcgagctggtggagcagcagccttcccacctggcctgc
cccgatgtcctgaacctgtccctagattcttctgacgtagagcgactggaaagattcttt
gattcagaagatgaagactttgaaatcttgtctctttga
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