Vulpes lagopus (Arctic fox): 121496563
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Entry
121496563 CDS
T07435
Symbol
PCDHB1
Name
(RefSeq) protocadherin beta-1
KO
K16494
protocadherin beta
Organism
vlg
Vulpes lagopus (Arctic fox)
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
vlg04515
]
121496563 (PCDHB1)
Cell adhesion molecules [BR:
vlg04515
]
Cadherins
Protocadherins
121496563 (PCDHB1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
121496563
NCBI-ProteinID:
XP_041620904
LinkDB
All DBs
Position
8:85507570..85510026
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AA seq
818 aa
AA seq
DB search
MAVARRKFLQSRQVGSLLFLLCISTGSAATIRYSVAEEMESGSFVANVAKDLGLEVGKLA
ARGARLVSEGSKVHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEIVLVEPLQSFRAE
VRVFDINDNAPIFLNKQPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSPNAYFHL
HTRFRSQGPKYAELVLDKPLDREEQPEVNLTITAVDGGSPPKSGIAHIRVEVLDVNDHVP
QFSRLVYRVQVPENSANGSLVATVSATDLDEGSNKEITYSLAQNPETILQTFQIDSQTGE
VRLRGPLDFEAIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVTVSSVSSPLPEDS
PLQTVVALFSIRDRDIQVGGKIICFLREDLPFAVKPTFRNSYSLVTDRGLDREEVSGYNV
TVVAMDTGPPSLFTETVIEVLISDINDNPPVFQEDSYILTVRENNSPAIFIGKVHAEDLD
LGENAQVTYTLLPPKSGDLAVFAYISINSDNGKLYALRTIDYEAIQDFQFVVKATDGGFL
SLSSQVTVRVVVLDDNDNRPMILYPLQNGTSPCNDLVPRSADVGYLVTKVVAVDGDSGRN
SWLSYHLLKATDPGLFSVQQQNGEIRTLRQISERDPMIQKLIVLVQDHGQPVLSTTASLN
ILLVDGFSEPYLQFRNPSKNPTRVNPSTKYLVISLAVLSFLFLLSVTVIFVLHIYQKVKY
REKFTVQEHFYDDCNFPNNLVQGGASGSLSQPCPYEMCSATGTSNSEFRFLKRFMPNFPF
PHGTGEAKTEACSSLPPDSERNRSQGSEDHGRVSDNCM
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggcggttgcgcgcagaaaattcttgcagagcaggcaagtagggtctcttctctttttg
ttgtgcatatctacggggagcgcggccactatccgctattcggtggcggaagagatggag
agcggttcgtttgtggctaatgtggccaaggacctggggctggaggtagggaagctggct
gcgcgcggggcgcgactggtttccgaaggcagcaaagtgcatttccggctccaccgcaag
acaggggatctgttcgtgaaggagaaactggatagggagtcgctttgtggcaaagctgac
ccgtgtgtgctgcactttgaaatagttctggtggagccgctgcagtcctttcgtgcggag
gtcagggtatttgatatcaatgacaatgccccgattttcctgaacaagcagccgctttta
aagattccggagagcacacccttgggttcacgttttcctctgcagagcgcccaggatctg
gacgtgggtctcaatggtcttcaaaactacaccttgagccccaacgcgtatttccacctg
cacacccgttttcgcagccaagggcccaaatatgccgagctggtcctggataagcctctg
gacagagaggagcagcctgaagtcaacctgaccattacggcggtggacggcgggtcccca
cccaaatctggcatcgcccacatccgcgtggaggttctggacgtcaatgaccacgtacct
cagttctctagactggtgtaccgcgttcaggtgccggaaaatagcgccaatggttctttg
gtggccactgtgagtgccacagacctggacgaaggttccaacaaggaaataacgtactcc
ttagctcaaaacccagaaacaattctccagacatttcagattgactctcaaactggagag
gttcgactaagagggcccctagattttgaagcaattgaaacatacgatattgacattcaa
gccaccgacggagggggcctctctgcccacagcaaagtcctggtggaagtggtggatgtg
aatgacaatccacctgaggtgacagtctcctctgtatccagccctctccccgaagactcc
ccactacaaactgtagtagcccttttctctattcgagaccgggacattcaggtgggagga
aaaatcatctgcttcctcagagaagaccttccttttgcagtcaaacctactttccggaat
tcttactcactggttactgacagaggcttggatcgggaagaggtttccggctacaatgtc
actgttgttgccatggatactgggccacccagtctattcacagaaactgtgattgaggtg
ctaatatctgacattaatgacaaccccccagtatttcaggaagactcctacattttgact
gttcgagaaaacaacagcccagcaatttttattggcaaagttcatgctgaagatctagat
ttgggtgagaatgcccaagtaacatatactttgctgcctccaaaaagtggagatttagcc
gtgtttgcttatatctccataaattcagataacgggaagctctatgcactgagaaccatt
gattatgaggccattcaagattttcagtttgtggtaaaggcaactgatgggggcttcttg
tcattgagtagccaggttactgtcagagtggttgttctggatgacaatgacaaccgccca
atgatcttgtacccactgcagaatggcacctcaccctgcaatgacttggtgcccaggtct
gcagatgtgggctacctggtaaccaaggtagtggctgtggatggtgactcaggtcggaat
tcttggctctcatatcatctccttaaggccactgaccctgggttattctctgttcaacaa
caaaatggggaaatccgtacattgcggcagatatctgagagagaccctatgattcagaaa
ctgatcgttcttgttcaagatcatggccaaccagttctttccactactgcctcactcaac
atcttgctggtagatggattttctgaaccttatctgcaattccggaatccatccaagaat
cctacaagggtaaatccatccactaaatatttggtcatttctctagctgtgctttccttt
ctctttctcttgtctgtcacagtgatctttgttcttcacatctaccagaaggttaaatat
agagaaaagttcacagttcaagagcatttctatgatgactgtaatttccctaacaacctg
gtacaaggaggggccagtgggtctttatctcagccgtgtccctatgaaatgtgctcagcc
accggcaccagcaatagtgagtttcggtttcttaagcgctttatgcccaactttcccttc
ccccatggcactggagaggcaaaaacagaggcttgctccagtttaccaccagattctgag
aggaataggtctcaggggtcagaggatcatggtcgagtatctgacaactgtatgtag
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