KEGG   Vulpes lagopus (Arctic fox): 121496665
Entry
121496665         CDS       T07435                                 
Symbol
AMFR
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR
  KO
K10636  E3 ubiquitin-protein ligase AMFR [EC:2.3.2.36]
Organism
vlg  Vulpes lagopus (Arctic fox)
Pathway
vlg04137  Mitophagy - animal
vlg04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:vlg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    121496665 (AMFR)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    121496665 (AMFR)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:vlg04121]
    121496665 (AMFR)
Enzymes [BR:vlg01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.36  RING-type E3 ubiquitin transferase (cysteine targeting)
     121496665 (AMFR)
Ubiquitin system [BR:vlg04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    121496665 (AMFR)
  Multi subunit type E3
   ERAD complex
    121496665 (AMFR)
   LMBR1L-GP78-UBAC2 complex
    121496665 (AMFR)
SSDB
Motif
Pfam: G2BR zf-RING_2 zf-C3HC4_2 CUE zf-C3HC4 zf-RING_11 zf-C3HC4_3 zf-ANAPC11 zf-RING_UBOX zf-rbx1 zf-RING_5 zf-RING_16 Prok-RING_4 zf-C3HC4_4 SVIP zf_RING_Vps8 zf-RING_Vps41
Other DBs
NCBI-GeneID: 121496665
NCBI-ProteinID: XP_041621090
LinkDB
Position
8:108809552..108853630
AA seq 645 aa
MPLLFLERFPWPSLRTYTGLSGLALLGTIVSAYRALSQPEAEPGEPEPPTAPLQAELAVP
ARPGAGGPRARDVAQYLLSDSLFVWVLVNTACCVLMLVAKLIQCIVFGPLRVSERQHLKD
KFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFAGLVFLHLMVQLCKDRFEYLSFSPTTPM
SSHGRVLSLLIAMLLSCCGLAVVCCVTGYTHGMHTLAFMAAESLLVTVRTAHVILRYVIH
LWDLNHEGTWEGKGTYVYYTDFVMELTLLSLDLMHHIHMLLFGNIWLSMASLVIFMQLRY
LFHEVQRRIRRHKNYLRVVGNMEARFAVATPEELAVNNDDCAICWDSMQAARKLPCGHLF
HNSCLRSWLEQDTSCPTCRMSLNIADNNRVREDQQGDNLDENLVPVAATEGRPRLNQHNH
FFHFDGSRIASWLPSFSVEVMHTTNILGITQASNSQLNAMAHQIQEMFPQVPYHLVLQDL
QLTRSVEITTDNILEGRIQVPFPTQRSDGIRPALNSPVERPNGDQEEGEASVQTERVPLD
LSPRLEEALDFSEVEVEPSEGEDFEARGSRFSKSADERQRMLVQRKDDLLQQARKRFLNR
SSEVESASASESCLTSEGTNSDPVTLRRRMLAAAAERRLQKQQIS
NT seq 1938 nt   +upstreamnt  +downstreamnt
atgccgctgctcttcctggagcgcttcccctggcccagcctccgcacctacacgggcctc
agcggcctggccctgctcggcaccatcgtcagcgcctaccgcgccctcagccagcccgag
gccgagcccggggagccggagccgccaaccgccccgctgcaggcggagctggccgtgccc
gcgcggcccggcgccggcggcccccgcgcccgcgacgtggcccagtacctgctctccgac
agcctgttcgtgtgggttctagtaaatactgcatgctgtgttttgatgctggtggctaag
ctaatccagtgtattgtgtttggccctcttcgagtgagtgagaggcagcacctcaaagac
aagttctggaattttattttctacaagttcattttcatttttggtgtgctgaatgtgcag
acagtggaagaggtggtcatgtggtgcctctggtttgctggacttgtatttctacatctg
atggttcagctctgcaaggaccgatttgaatatctgtcgttttctcccaccacacccatg
agtagccacgggcgggttctgtctctgttgatcgcgatgctgctttcttgctgtggatta
gcagtggtctgctgtgtcactggctacacgcacgggatgcacacgctggctttcatggca
gcggagtctcttcttgtgacagtgaggactgctcacgtgattttacgatatgtaattcac
ctctgggacctcaaccatgaagggacttgggaaggaaaaggaacctatgtctattacaca
gattttgtcatggagctcactctcttgtccctggacctcatgcaccatattcatatgttg
ttatttggcaacatctggttatccatggccagcttggtcatcttcatgcagctgcgttat
ctcttccatgaagtgcagcgtcgaatccgccggcacaagaactacttgcgtgtggtcggg
aacatggaagccaggtttgcggttgcaactccagaggagctggccgtcaacaatgatgac
tgtgccatctgctgggactccatgcaggccgcgaggaagctgccctgcggacatcttttc
cacaactcctgccttcgttcctggctagaacaagacacctcctgcccaacatgcagaatg
tctcttaatattgctgacaataaccgggtccgggaggaccagcaaggagacaacttggat
gagaatttggtgcctgtagcagccactgaaggccgacctcgcctaaaccaacacaatcat
ttcttccactttgatgggtcccggattgccagttggttgccgagtttttcagtagaagtg
atgcacaccaccaacattctaggcattacgcaggccagcaactcccagctgaatgcaatg
gctcatcagattcaagagatgtttccccaggttccctaccatctcgtgctgcaggacctc
cagctgacacgctccgtagaaataacaacagacaacattttagaaggacggattcaagta
ccttttcccacacagcgctcagatggcatcaggcctgcattgaacagtcccgtggaaagg
ccaaatggagaccaggaggagggagaagcttctgtgcagactgagcgtgtgccactagac
ctcagtcctcggctggaggaggccttggatttcagtgaggtggaggtggagcccagtgag
ggggaagactttgaggcccgggggagccgcttctccaagtctgcagacgagaggcagcgc
atgctggtccagcgtaaggatgacctcctgcagcaagctcgcaagcgtttcctgaaccga
agttctgaagttgagtctgcctccgcctctgagagctgcctcacatcagaaggcacgaac
tccgaccctgtgaccctgcgtcggaggatgctggctgcagcggccgaacggaggctccag
aagcagcagatctcctag

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