Vulpes lagopus (Arctic fox): 121496698
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Entry
121496698 CDS
T07435
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg03082
ATP-dependent chromatin remodeling
vlg04714
Thermogenesis
vlg05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121496698 (ARID1A)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
121496698 (ARID1A)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
121496698 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vlg03000
]
121496698 (ARID1A)
03021 Transcription machinery [BR:
vlg03021
]
121496698 (ARID1A)
03036 Chromosome and associated proteins [BR:
vlg03036
]
121496698 (ARID1A)
Transcription factors [BR:
vlg03000
]
Eukaryotic type
Helix-turn-helix
ARID
121496698 (ARID1A)
Transcription machinery [BR:
vlg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
121496698 (ARID1A)
Chromosome and associated proteins [BR:
vlg03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
121496698 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
121496698
NCBI-ProteinID:
XP_041621146
LinkDB
All DBs
Position
8:complement(122427464..122497310)
Genome browser
AA seq
2284 aa
AA seq
DB search
MAAQVAPAAASSLGNPPPPPSELKKAEQQQREEAGGEAAAAAAAERGEMKAAAGQESEGP
AVGPPQPLGKELQDGAESNGGGGGGGAGAGGGPGAEPDLKNSNGNAGPRPALNNNLTEPP
GGGGGGSSDGVGAPPHSAAAALPPPAYGFGQPYGRSPSAVAAAAAAVFHQQHGGQQSPGL
AALQSGGGGGGLEPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPPQAYALSSPRGGTPG
SGAAAAAGSKPPPSSSASASSSSSSFAQQRFGAMGGGGPSAAGGGTPQPTATPTLNQLLT
SPSSARGYQGYPGGDYGGGPQDGGAGKGPADMASQCWGAAAAAAAAAAAASGGAQQRSHH
APMSPGSSGGGAQPLARTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPSSGPQQGHGYPG
QPYGSQTPQRYPMAMQGRAQSAMGGLSYAQQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQ
QQQPPYSQQPPSQNPHAQPSYQQQPQSQPPQLQASQPPYSQQPSQPPHQQSPTPYPSQQP
TTQQHPQSQPPYSQPQAQSPYQQQQPQQPASSTLSQQAAYPQPQSQQSQQTAYSQQRFPP
PQELSQDSFGSQASSAPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSP
GVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAV
PGNQMPPRPPSGQSDSIMHPSMNQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQPSGG
QMHTGMGSYQQNSMGSYGPQGSQYGPQGGYPRQPNYNALPNANYPSAGMAGSMNPMGAGG
QMHGQPGIPPYGTLPPGRMSHASMGNRPYGPNMANMPPQVGSGMCPPPGGMNRKTQETAV
AMHVAANSIQNRPPGYPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYPMGGTMANNSA
GMAASPEMMGLGDVKLTPATKMNNKADGTPKTESKSKKSSSSTTTNEKITKLYELGGEPE
RKMWVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATN
LNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAASDSKKSQPKIQPPSPAGSG
SMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQIPPLPGMSRSNSVGIQDAFPDGSDPTF
QKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGSMRKAPGSDPFMSSGQGPNGGMGDP
YSRAAGPGLGNVAMGPRQHYPYGGPYDRVRTEPGIGPEGNMGTGAPQPNLMPSNPDSGMY
SPSRYPPQQQQQQQRHDSYGNQFSTQGTPSGSPFPSQQTTMYQQQQQNYKRPMDGTYGPP
AKRHEGEMYSVPYSTGQGQPQQQQLPPAQPQPASQQQAAQPSPQQDVYNQYGNAYPATAA
AATERRPAGGPQNQFPFQFGRDRVSAPPGSNAQQNMPPQMMGGPIQASAEVAQQGTMWQG
RNDMTYNYTNRQSTGSAPQGPAYHGVNRTDEMLHTDQRANHEGPWPSHGTRQPPYGPSAP
VPPMTRPPPSNYQPPPSMQNHIPQVSSPAPLPRPMENRTSPSKSPFLHSGMKMQKAGPPV
PASHIAPAPVQPPMIRRDITFPPGSVEATQPVLKQRRRLTMKDIGTPEAWRVMMSLKSGL
LAESTWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPG
QRTLLDPGRFSKACSPAPMEGEEEEDLLGPKLEEEEEEEVVENDEEMAFSGKDKAATESS
EEKLISKFDKLPVKIVQKNDPFVVDCSDKLGRVQEFDSGLLHWRIGGGDTTEHIQTHFES
KTELLPNRPHVPCPPVTRKHVTAPEGTPGTTEQEGPPPDGPPEKRITATMDDMLSTRSST
LTEEGAKSAEATKESSKFPFGISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLAKRC
VCVSNTIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQGV
SCNKVEWWWDCLEMLRENTLVTLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAEAQD
PFSTLGPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNP
VCREMAVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLLHMQNP
PFEPTSVDMMRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFL
IGQS
NT seq
6855 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcaggtcgcccccgccgccgccagcagcctgggcaacccgccgccgccgccc
tcggagctgaagaaagcggagcagcagcagcgggaggaggcggggggcgaggcggcggcg
gcggcagcggccgagcgcggggaaatgaaggcagccgccgggcaggagagcgagggcccc
gccgtggggccgccgcagccgctgggaaaggagctgcaggacggggccgagagcaatggg
ggtggcggcggcggtggagccggcgccggcggcgggcccggcgcggagccggacctgaag
aactcgaacgggaacgcgggccctaggcccgccctgaacaataacctcacggagccgccc
ggcggcggcggcggcggcagcagcgatggggtgggggcgcctcctcactcagccgcggcc
gccttgccgcccccagcctacggcttcgggcaaccctacggccggagcccgtctgccgtc
gccgccgcggcggccgccgtcttccaccaacaacatggcggacaacaaagccctggcctg
gcagcgctgcagagcggcggcggcggcgggggcctggagccctacgcggggccccagcag
aactcgcacgaccacggcttccccaaccaccagtacaactcctactaccccaaccgcagc
gcctaccccccgcccccccaggcctacgcgctgagctccccgagaggtggcactccgggc
tccggcgcggcggcggccgccggctccaagccgcctccctcttccagcgcctccgcctcc
tcgtcgtcttcgtccttcgctcagcagcgcttcggggccatggggggaggcggcccctca
gcggccggcgggggaaccccccagcccaccgccacccccaccctcaaccaactgctcacg
tcgcccagctcggcccggggctaccagggctaccccgggggcgactacggcggcgggccc
caggacgggggcgccggcaagggcccggcggacatggcctcgcagtgctggggggctgcg
gcggcggcggcggcggcggcagcagccgcctcgggaggggcccaacaaaggagccaccac
gcgcccatgagccccgggagcagcggcggcggggcgcagccgctcgcccggaccccgcag
ccatccagtccaatggatcagatgggcaagatgagacctcagccatatggcgggactaac
ccatactcgcaacaacagggaccttcatcaggaccgcagcaaggacatgggtacccaggg
cagccatatgggtcccagaccccgcagcggtacccgatggccatgcaaggccgggcgcag
agtgccatgggtggcctctcttatgcacagcagattcctccttatggacaacaaggcccc
agtgggtatggtcaacagggccaaactccatattacaaccagcaaagtcctcacccccag
cagcagcagccgccctactcccagcagccaccgtcccagaaccctcacgcccagccttcc
tatcagcagcagccacagtctcagccaccacagctccaggcttctcagcctccctattcc
cagcagccatcccagcctccgcatcagcagtccccaactccatacccctcccagcagccc
accacccagcagcacccccagagccagcccccctactcacagccacaggcacagtctccc
taccagcagcagcaacctcagcagccagcctcctcgacgctctcccagcaggctgcatac
cctcagccccagtctcagcagtcacagcaaactgcctattcccagcagcgcttccctccg
ccgcaggagttatctcaagattcatttgggtctcaggcatcctcagccccctcaatgacc
tccagtaagggaggacaagaagatatgaacctgagtcttcagtcaagaccctcaagcttg
cctgatctatctggttcaatagacgatctccccatggggacagaaggagctctgagccct
ggagtgagcacatcagggatttccagcagccaaggagagcagagtaatccagctcagtct
cctttctctcctcatacttcccctcacctgcctggcatccgaggcccctccccatcccct
gttggctctcccgccagtgttgctcagtctcgctcaggaccactctcgcctgctgcagtg
ccaggcaaccagatgccacctcggccacccagtggccagtcggacagcatcatgcatcct
tccatgaaccaatcgagcattgcccaagatcgaggttacatgcagaggaacccccagatg
ccccagtacagttccccccagcccggctcggccttatctccgcgtcagccttcgggtgga
cagatgcacacaggcatgggctcctaccagcagaactccatggggagctacggtccccag
gggagtcagtacggcccacagggaggctaccccaggcagccaaactataatgccttgccc
aatgctaactaccctagtgcaggcatggccggaagcatgaaccctatgggtgctggaggt
cagatgcatgggcagcctggcatcccaccttatggcacactccctccagggagaatgagt
catgcctccatgggcaaccggccttatggccctaacatggccaatatgccacctcaggtt
gggtcagggatgtgtcccccaccagggggcatgaaccggaaaactcaagaaactgctgtc
gccatgcatgttgctgccaactctatccaaaacaggccaccaggctaccccaatatgaat
caggggggcatgatgggaactggacctccctacggacaagggattaatagtatggctggc
atgatcaaccctcagggacccccgtatcctatgggtgggactatggccaacaattcagca
gggatggcagccagcccagagatgatgggccttggggatgtcaagttaactccagccacc
aaaatgaacaacaaggcagatgggacacccaagacagaatccaaatccaagaaatccagt
tcttctactacaaccaatgagaagatcaccaagttgtatgagctgggtggtgagcctgag
aggaagatgtgggtggaccgttatctggccttcacggaggagaaggccatgggcatgaca
aatctgcctgctgtgggtaggaaacctctggacctctatcgcctctatgtgtctgtgaag
gagattggtggattgactcaggtcaacaagaacaaaaaatggcgggaacttgcgaccaac
ctcaatgtgggcacctcgagcagtgctgccagctccttgaaaaagcagtacatccagtgt
ctctatgcctttgagtgcaagattgaacggggagaagaccctcccccagacatctttgca
gcttctgattccaagaagtcccagcccaagatccagcctccctctcctgcgggatctggg
tctatgcaggggccacagacacctcagtcaaccagcagttccatggcagaaggaggagac
ctgaagccaccaactccagcatccacaccacacagtcagatcccccccttgccaggcatg
agcaggagcaattcggttgggatccaggatgcctttcctgatggaagtgaccccacattc
cagaagcggaattccatgactccaaaccctgggtaccagcccagtatgaatacctctgac
atgatggggcgcatgtcctacgagccaaataaggatccttatggcagcatgaggaaagct
ccagggagtgatcccttcatgtcctcagggcagggccccaatggcggaatgggagacccc
tacagccgtgctgctggccctgggctgggaaatgtggcaatgggaccgcgacagcactat
ccctatggaggtccttatgacagagtgaggacggagcctggaataggacccgagggaaac
atgggcactggagctccacagccgaatctcatgccttccaacccagactcggggatgtat
tctcccagccgctaccccccgcaacagcagcagcagcaacaacgacatgattcctatggc
aatcagttctccactcaaggcaccccttccggcagccccttccccagccagcagaccaca
atgtatcagcagcagcagcagaattacaaacggccaatggatggcacatacggccctccc
gccaagcggcacgaaggggagatgtacagcgtgccatacagcacagggcaggggcagccg
caacagcagcagttgcccccagcccagccccagcctgccagccagcagcaagctgcccag
ccttcccctcagcaagatgtatacaaccagtatggcaacgcttatcctgccactgccgcc
gctgctactgagcgccgaccagcaggcggcccccagaaccagtttccattccagtttggc
cgagaccgtgtctctgcaccccctggctccaatgcccagcagaacatgccaccgcaaatg
atgggcggccccatacaagcatcggctgaggttgctcagcaaggcaccatgtggcagggg
cgtaatgacatgacctacaattataccaacaggcagagcactggctctgccccccagggc
cctgcctatcatggtgtgaaccgaacagatgaaatgctgcatacggatcagagggccaac
catgaaggcccgtggccttcccatggtacacgtcagcccccatatggtccctctgccccc
gtgccccccatgacaaggccccctccatccaactaccagcccccgccaagcatgcagaat
cacattcctcaggtatccagccccgctcccttgccccggccaatggagaaccgcacctct
cctagcaagtctccattcctacactctgggatgaagatgcaaaaggcaggccccccagta
cctgcctcgcacatagcacctgcccccgtgcagccacccatgattcggcgggacatcacc
ttcccacctggctctgtggaagcaacacagcctgtgttgaagcaaaggaggcggctcaca
atgaaagacatcggaaccccggaggcatggcgggtaatgatgtccctcaagtctgggctg
ctggcagagagcacatgggcattagacaccattaacatcctgctgtatgatgacaacagc
atcatgaccttcaacctcagtcagctcccaggtttgttagagctccttgtggaatatttc
cgacgttgcctgatcgagatctttggcattttaaaggagtatgaggtgggtgacccagga
cagagaacactactggaccctgggagattcagcaaggcgtgtagtccagcccccatggag
ggggaggaggaagaagaccttttaggtcctaaactagaggaggaagaagaggaagaagta
gtggaaaatgacgaggagatggccttttcgggcaaggacaaggcagccacagagagtagt
gaggagaaacttattagtaagttcgacaagcttccagtaaagatcgtgcagaagaatgac
ccgtttgtggtggactgctcagataagctcgggcgcgtgcaggagtttgacagtggcctg
ctgcactggcggattggtgggggggacaccactgagcatatccaaacccactttgagagc
aagacagagctgctgccgaacaggcctcatgtgccctgccctccagtcacccggaaacat
gtcacagcaccagagggtacgccagggacgacagaacaggagggccccccacctgatggc
cctccagagaaacggatcacagccacaatggatgacatgttgtccactcgatctagcacg
ttgaccgaagagggagctaagagtgcagaggccaccaaggagagcagcaagtttccattc
ggcatcagcccggcacagagccaccggaacatcaagatcctagaggacgaaccccacagt
aaagatgagaccccactgtgtacccttctggactggcaggattccctcgccaaacgctgt
gtctgtgtctccaataccatccgaagtctatcgtttgtgccaggcaacgactttgagatg
tccaaacacccgggtctgctgctgatcctgggcaagctgatcctcctgcatcacaagcac
ccagagcggaagcaggcaccactgacttatgagaaggaggaggagcaggaccaaggggtg
agctgcaacaaagtggagtggtggtgggactgcttggagatgctccgggagaacaccttg
gtcacgctcgccaacatctcggggcagttggacctctctccgtaccctgagagcatttgc
ctgcctgtcctggacggactcctacattgggcagtctgcccttccgctgaagcccaggac
cccttctccaccctgggccccaatgccgtcctctccccccagagactggtcttggaaacc
ctcagcaaactcagcatccaggacaacaatgtggacctgatcctggccacgccccccttc
agccgcttggagaagttgtatagcaccatggtgcgcttcctcagtgaccgaaagaacccg
gtgtgccgggagatggctgtggtactgctggccaacctggcacagggcgacagcctggca
gctcgtgccatcgcagtgcagaagggcagcatcggcaacctcctgggcttcctggaggac
agccttgctgccacacagttccagcagagccaggccagcctgctccacatgcagaacccg
cccttcgagccaacgagtgtggacatgatgcggcgggctgcccgcgcactgctggccttg
gccaaggtggacgagaaccactcggagttcacgctgtacgagtcacggctgttggacatc
tcggtatcaccgttgatgaactcgttggtttcacaagtcatttgtgatgtactgtttttg
attggccagtcatga
DBGET
integrated database retrieval system
