Vulpes lagopus (Arctic fox): 121496785
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Entry
121496785 CDS
T07435
Symbol
FDFT1
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg00100
Steroid biosynthesis
vlg01100
Metabolic pathways
Module
vlg_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
121496785 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
vlg01006
]
121496785 (FDFT1)
Enzymes [BR:
vlg01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
121496785 (FDFT1)
Prenyltransferases [BR:
vlg01006
]
Terpene biosynthesis
Squalene/phytoene synthase
121496785 (FDFT1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
HAUS4
Motif
Other DBs
NCBI-GeneID:
121496785
NCBI-ProteinID:
XP_041621348
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All DBs
Position
8:25387739..25425430
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AA seq
484 aa
AA seq
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MEEKLSAGPALPMAAAACGTKAMSLFKRTLVLSPASAPRATGTGSPPRGCPLPPAAWSCK
DRARGEGVCGRLRSPPAGRLPQSHSCSSAAPTSVCLLCPQDSLSSSLKTCYKYLNQTSRS
FAAVIEALDGEMRHAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSYLYEPDWRYME
SKEKDRQVLEDFPTISLEFRNLAEKYQTVIVDICRKMGFGMAEFLDKHVTSEQEWDKYCH
YVAGLVGIGLSRLFSASELEDPLVGEDIECANSMGLFLQKTNIIRDYLEDQREGREFWPQ
EVWSKYVKKLGDFAKPQNIDSAVQCLNELITNALHHIPHVITYLSRLRNQSVFNFCAIPQ
VMAIATLAACYNNQQVFKGIVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPSSD
PSSGKTRQIISTIRTQNLPNCQLISRSHYSPIYLSFVMLLAALSWQYLSTLSQVTEDYVQ
TGEH
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaaactctccgcgggccctgcgcttcccatggccgcggccgcctgcggcacc
aaggccatgtccctgttcaagcggaccctggtgctgagccccgcctcggcgccccgggcc
acgggcaccggctccccgccgcgcggctgccccttgccccccgccgcctggtcctgcaag
gaccgggcgcggggagagggcgtgtgcggccgcctgcggagcccgcccgccggccgcctg
ccccagtcccactcctgctcctccgcggcccccacctccgtgtgtcttctctgcccgcag
gactcgctcagcagcagcctgaaaacctgctacaagtatctcaatcagaccagtcgcagt
tttgcagctgtcatcgaggcgctggatggggaaatgcgccatgcggtatgcatattttat
ctggtcctccgagctctggacactctggaagatgacatgaccatcagtgtagaaaaaaag
gttccactgctacacaactttcactcttacctttatgaaccagactggcggtatatggag
agcaaggagaaggatcgacaagtgctagaggacttcccaacgatctccctggagtttaga
aatttggctgagaaatatcaaacagtgattgttgacatttgccggaaaatgggatttggg
atggcggagtttttggataaacacgtaacatctgaacaggagtgggacaagtactgtcac
tatgtcgctggactggtggggattggcctttcccgactgttctcagcctcagagttagaa
gaccctttagttggtgaagacatagagtgtgccaattctatgggcctgtttctgcagaaa
acaaacatcatccgtgattatctggaagaccagcgagaaggaagagaattttggcctcaa
gaggtttggagcaagtatgttaagaagttgggtgattttgctaagccacagaatattgac
tcagctgtgcagtgcctgaacgaacttataaccaacgcgctacaccacatcccacatgtc
atcacttacctctcaagacttagaaaccaaagtgtgtttaacttctgtgctattccacag
gtgatggccattgccactctggctgcctgttacaataatcagcaggtgttcaaaggtata
gtgaagatccgaaaagggcaagcagtaactctaatgatggatgctaccaatatgccagcg
gtcaaagctataatataccaatatatggaagagatttatcatagaatccccagctcagac
ccgtcttctggtaaaacaaggcagatcatctctaccatcaggacacagaatcttcccaat
tgccagctgatctcccgaagtcactactcccctatttacctgtcgtttgtcatgctcttg
gccgccttgagctggcaatatctgagcaccctgtcccaggtcacagaggactatgttcag
actggagaacactga
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