KEGG   Vulpes lagopus (Arctic fox): 121496835
Entry
121496835         CDS       T07435                                 
Symbol
POLR2C
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
vlg  Vulpes lagopus (Arctic fox)
Pathway
vlg03020  RNA polymerase
vlg03420  Nucleotide excision repair
vlg05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:vlg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    121496835 (POLR2C)
  09124 Replication and repair
   03420 Nucleotide excision repair
    121496835 (POLR2C)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    121496835 (POLR2C)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vlg03021]
    121496835 (POLR2C)
   03400 DNA repair and recombination proteins [BR:vlg03400]
    121496835 (POLR2C)
Transcription machinery [BR:vlg03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     121496835 (POLR2C)
DNA repair and recombination proteins [BR:vlg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      121496835 (POLR2C)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L
Other DBs
NCBI-GeneID: 121496835
NCBI-ProteinID: XP_041621509
LinkDB
Position
8:complement(107995488..108003761)
AA seq 275 aa
MPYANQPTVRITELTDENVKFIIENTDLAVANSIRRVFIAEVPIIAIDWVQIDANSSVLH
DEFIAHRLGLIPLTSDDIVDKLQYSRDCTCEEFCPECSVEFTLDVRCNEDQTRHVTSRDL
ISNSPRVIPVTSRNRDNDPNDYVEQDDILIVKLRKGQELRLRAYAKKGFGKEHAKWNPTA
GVAFEYDPDNALRHTVYPKPEEWPKSEYSELDEDESQAPYDPNGKPERFYYNVESCGSLR
PETIVLSALSGLKKKLSDLQTQLSHEIQSDVLTIN
NT seq 828 nt   +upstreamnt  +downstreamnt
atgccgtatgccaaccagcccaccgtgcggatcaccgagcttaccgacgagaatgtcaag
ttcatcatcgagaacacggacctggcggtggccaactccatccggagggtcttcatcgcc
gaggtgcccataatagccattgactgggtccaaattgatgccaattcctcagttcttcat
gatgagttcatcgctcacagacttggactaatccccctgactagtgatgacattgtggac
aagctgcagtactcccgggactgcacatgtgaggagttctgccccgagtgctcggtggag
ttcacccttgatgtgcggtgcaatgaagaccagactcggcacgtcacgtctcgagacctc
atctccaacagccctcgggtcattccggtgacatcccggaaccgagataatgaccccaat
gattatgtggagcaggacgacatcctcattgtcaagctgaggaaaggccaggagctaaga
cttcgagcctatgccaaaaagggctttggcaaggagcatgctaagtggaaccctactgca
ggggtagcttttgaatatgatcctgacaatgccctgaggcacaccgtgtaccccaagccc
gaggaatggcccaagagtgagtactcagagctggatgaagatgagtcacaggctccctac
gaccccaatggcaagccagaaaggttttattacaacgtggagtcctgtggctctctgcgc
cctgaaacaattgtcctctcagccctctctggattaaagaagaaactaagtgatctacag
acccagttaagccacgagatccagagtgatgtactgaccataaactag

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