Vulpes lagopus (Arctic fox): 121497042
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Entry
121497042 CDS
T07435
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
vlg
Vulpes lagopus (Arctic fox)
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vlg03036
]
121497042 (CHD9)
Chromosome and associated proteins [BR:
vlg03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
121497042 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_Hrp3
Motif
Other DBs
NCBI-GeneID:
121497042
NCBI-ProteinID:
XP_041622002
LinkDB
All DBs
Position
8:complement(111378979..111601406)
Genome browser
AA seq
2903 aa
AA seq
DB search
MTDPMMDFFDDANLFGETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQGTP
THQKITDYEQLNQFDSMKFHQVNQPFGSPAEHVLSPHSQFNCSPIHPQNQPNGLFPDVAD
GSPMWGHQTATSISNQNGSPFHQQGHSHSMHQNKSFVVHHDFALFQASEQQTQCTSLRSQ
QNRNNLNPGQNSLSQSKNFMDVNVSGPHRVSVNHPSQITNASTSQQSLSMQQFSQTSNPS
VHFLKCSNHQEGNFNGPSPNMTSCSVSNSQQFSSHYSFSSNHVSPNNLLQASAVLAPNHT
NQTLSDFTGSNSFSPHRGIKQESTQHLLNTNTSLNSNNFQMLHSSHPQGNYSNSKLSPVH
MNFPDPVDSGTQMGHFNDHVETNGFSSLEENLLHQVESQTEPFTGLDPEDLLQEGLLPQF
DEAAFGQDHSSHVLDHDLERQLTSHLVTRPSDMAQTQLHGQARSWHSSLSNHQHLHDRNR
LYLQRQPPSSKKSDGSGTYTKLQNTQVRIMSEKKQRKKVESESKQEKANRIISEAIAKAK
ERGERNIPRVMSPENFPSASVEGKEEKKGRRMKSKPKDKESKKTKTCSKLKEKTKIGKLI
ITLGKKQKRKNESSDEISDTEQMPQHACKEEDSQKRRSNRQIKRKKYAEDAEGKQSEEEV
QGSMKIKKNSAPLPGEQPLQLFVENPSEEDAAIVDKILSSRIVKKEVSPGVMIDTEEFFV
KYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFLADMEEEPFNPDYVEVDRV
LEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEHLQASRPDTRHLD
RPPANIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITF
LYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHGSLISRQMIQQYEMYFRDS
QGRIIRGAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNL
EHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAILKPMM
LRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGAGQTNVPNLVNTMM
ELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGG
HKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCT
RAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFD
RASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIEDLLRRGAYGAIMEEEDEGSKFCEED
IDQILLRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDAIN
GRNSLVIDTPRIRKQTRPFSATKDELAELSEAESEGDEKPKLRRPCDRSNGYGRTECFRV
EKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRALLAYCLVHYRGDEKIKGFIWDLIT
PTEDGQTRELQNHLGLSAPVPRGRKGKKVKTQTSSFDIQKAEWLRKYNPEQLLQDEGYKK
HIKHHCNKVLLRVRMLYYLKQEVIGNECQKVFDGVDASDIDVWVPEPDHSEVPAEWWDFD
ADKSLLIGVFKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQRANDYMDGDVEDPEYK
PAPAIFKDDIEDDVSSPGDLVIADGDGQLMEGDKIYWPTQSALTTRLRRLITAYQRTNKN
RQIQQIQPTFSVPASVMQPLYEEATLNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFD
PDRGQFDWTKFRAMARLHKKTDDSLEKYLYAFMSMCRRVCRLPSKEELVDPNIFIQPITE
ERASRTLYRIELLRKVREQALRHPQLFERLKLCHPNPDLPVWWECGPHDRDLLIGAAKHG
VSRTDYHILRDPELSFMAAQRNYSQSKMAHSRTSTPLLQQYQVALSASPLTSLPRLLDAK
GIILEDMKVKSENLKEEPQSSEEESMSSEETRTLIKSEPVSPKNGVLPQATGDQKSGGKG
ETDRRMVAARTEPLTPNPASKKQRVHKRGSESSSESDSDSERSSCSSRSSSSSSSSSSCS
HSRSGSSSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSEEEEVQKRAEGTPHVKAYD
EESVASLSTTQDETQDSFQMNNGTPESAYILQGGYMLAASYWPKDRVMINRLDSICQTVL
KGKWPSARRSYDANTVASFYTTKLLDSPGAATEYSEPGVPTPPGAGGKEEHDQSTQMSKV
KKHVREKEFTVKIKDEGGLKLTFQKQGLAQKRPFDSEDGALGQQQYLARLRELQSASETS
LANFPKSMPVSGTSIQSTLGANGVRLDNQPIVKKRRGRRKNVEGVDILFFNRNKPPNHVT
LGLTTSQISTGINPALSYTQPQGIPDTESPVPVINLKDGTRLAGDDAPKRKDLEKWLKEH
PGYVEDLGAFIPRVQLHEGRPKQKRHRCRNPNKLDVNSLTGEERVQLINRRNARKVGGAF
APPLKDLCRFLKENSEYGVAPEWGDVVKQSGFLPESMYERILTGPVVREEVSRRGRRPKS
GIAKATAAAAAAATATSASGNPLLANGLLPGVDLTTLQALQQNLQNLQSLQVTAGLMGMP
AGLSSGGEAKNMAAMFPMLLSGMTGLPNLLGMGGLLTKPTESGTEEKKGNDSKELEGKKE
RTESQNSENGGENSVSSSPSTSSTAALNTAAAANPLALNPLLLSNILYPGMLLTPGLNLH
MPTLSQSNTFDVQKNKNNDLGSSKSLEVKEEDSRVRDQEDKGGTEPSPLNENSTDEGSEK
ADASSGSDSTSSSSEDSDSSNED
NT seq
8712 nt
NT seq
+upstream
nt +downstream
nt
atgacagatccaatgatggacttttttgatgatgccaatctttttggtgagaccttagaa
ggtttgtcagatgatgcatttgtacagccaggacctgtttcactagttgatgaattgaac
ttgggtgcagaatttgaacctttgcacatagattcactgaaccatgttcagggtactcca
acacatcagaagataactgattatgagcagttaaatcagtttgattcaatgaaatttcac
caagtcaatcagccttttggtagcccagctgaacatgtgttatctccacactctcagttt
aattgttccccgattcacccccaaaaccagcccaatggtttgtttccagatgtagcagat
ggcagtccaatgtggggccatcagacagctaccagcatttccaatcaaaatgggtctcct
tttcaccaacaaggacattctcactctatgcatcaaaacaaaagctttgtggtacaccat
gactttgccttatttcaggccagtgaacaacaaacacagtgcacttcactacgctcacaa
caaaacagaaataatcttaacccagggcagaattctctcagccagtctaaaaattttatg
gatgttaatgtttctggtccacacagagtcagtgttaaccacccatcacaaatcactaat
gcatctacatcacaacagtctctttcaatgcagcaattttcccaaacttcaaatccttca
gttcacttcctcaagtgtagcaaccatcaagaagggaattttaatggaccttctccaaat
atgacttcttgttctgtcagtaattcacagcagttttcttcacattattccttttccagt
aatcatgtctcaccaaacaatcttctgcaggcctctgcagtgcttgcacctaatcataca
aatcagactttatctgattttaccggaagtaactccttttcacctcatagaggaatcaag
caagaatccactcagcatttgctaaataccaatacatcgttgaattcaaataatttccaa
atgttgcattcatcacatcctcagggtaattatagcaattcaaaattatctcctgtgcac
atgaacttcccagatcctgttgactcaggaactcaaatgggccatttcaatgatcacgta
gaaactaatggcttttcatctttagaagagaatttacttcatcaagtggaatctcaaact
gagccattcacaggacttgacccagaagacctccttcaggagggtctccttccccaattt
gatgaggcagcatttggacaagatcattcaagtcatgttttagatcatgaccttgaacgg
cagttgacttcacatcttgtaactcggccttcggatatggctcaaactcagctgcatggt
caggctcggagttggcactcctccctttccaatcatcagcatttacatgacagaaatcgc
ctttatttacagcgacagcccccatcttccaagaagagtgatggttctgggacatatact
aagttgcagaatacccaggtgaggatcatgtctgaaaagaagcagaggaaaaaggtggaa
tcagaaagcaagcaagaaaaggctaatcggataatatcagaggccatagcaaaagcaaag
gaacgtggggagcgcaatattccgagagtaatgagtcccgaaaactttcctagtgcttca
gttgaaggaaaagaggaaaagaaaggtagacggatgaaatccaagccaaaggacaaagag
agcaaaaaaacaaaaacttgttctaagttaaaagagaagacaaaaattggcaaactcatt
attacattgggtaagaaacaaaaaagaaagaatgaatcttcagatgagatatctgataca
gagcagatgccacagcatgcatgcaaagaggaagactctcaaaaaagaagatcaaatcgt
caaattaaaagaaaaaaatacgcagaagatgcagaagggaaacaatctgaagaagaggtt
caaggttctatgaaaataaaaaaaaattcagctcctttacctggtgaacagcctttacaa
ttatttgtggagaatccaagtgaagaagatgctgcaattgtagacaaaatactatcttct
agaattgtaaaaaaggaagtatcacctggagtgatgattgatacagaagaattttttgta
aaatacaagaattactcctatcttcactgtgagtgggccacagagcagcagctgttgaaa
gataaaaggatccagcagaaaatcaaacgattcaaattgagacaagcccaaagagcacat
tttttggcagacatggaagaggaaccatttaacccagactacgttgaagtagacagagtg
ttagaagtctctttttgtgaagataaagacactggtgagcctgttatttactacttagta
aagtggtgctcattaccatatgaagatagtacatgggagctaaaggaagacgtagatctt
gcaaaaatagaagagtttgaacacttacaagcttcaaggcctgacacaagacatttggat
cgtcctcctgctaatatttggaaaaaaattgatcaatccagggactataaaaatggcaat
caactcagggaatatcaactggaaggactcaactggctcttattcaattggtacaataga
cgaaactgcattttagcagatgaaatgggtcttggcaaaaccattcaatcaattacattc
ctctacgaaatccttctgactggtataagaggacctttcctgattattgctccactttct
accattgcaaactgggagagagaatttcgtacatggactgatattaatgttgtggtttat
catgggagcctgattagcagacaaatgatacagcaatatgagatgtacttcagggactca
cagggacgtatcattcgaggagcttacagattccaagccatcatcaccacttttgaaatg
attctgggtggctgcggagagcttaatgcaattgaatggcgatgtgtgattattgatgaa
gcacataggttaaaaaataaaaattgtaaacttctagaaggtctgaaactcatgaatctg
gaacacaaggtgcttctgactggcacacctctccaaaatacagttgaagaactattcagt
cttcttcacttcctagaacctttaaggtttccttctgaatcaacatttatgcaagaattt
ggggacctgaaaacagaggaacaggtgcagaaacttcaggctatcttgaagccgatgatg
ttgagacgattgaaagaagatgtggaaaagaagctggcaccaaaggaagaaaccatcatt
gaagtggaacttactaatattcagaagaaatactaccgggctattttggagaagaacttt
tcatttttgtccaaaggagcagggcagactaatgtccctaacttggtcaatactatgatg
gagctcaggaagtgctgtaatcatccatatcttatcaaaggtgctgaagagaaaatactt
ggagaatttagagatacatataatccagctgcttctgattttcatcttcaagcaatgatc
cagtctgctggcaaattggtccttatagataaattgcttcccaaaatgaaagccggaggt
cataaagtgctcatattctctcagatggtacgctgccttgacatcctggaggactatctc
attcataaaagatatttatatgagcgaatcgatggaagagtcagagggaatcttcgacag
gctgctatagaccgatttagtaaacctgattcagatcgatttgttttccttctatgtacc
cgagctggtgggttgggcatcaacctaactgctgcagatacatgtataatttttgattct
gattggaatcctcagaatgacctgcaggcccaagctcgttgccacagaatcggtcagaat
aaagcagttaaagtctaccgactagtaactcgtaactcatatgagagagagatgtttgac
cgagccagtctgaagctgggtctagataaggctgtgttacagagcatgagcggaagagaa
agtaatgttggtggtattcaacagctttctaaaaaggaaatagaagatctgcttcgaaga
ggtgcttatggtgccattatggaggaagaagatgaaggctctaaattctgtgaggaggat
attgatcagattttactacgtcggacaaaaactattacaattgagtcagaaggacgtggg
tcaacatttgccaaggcgagttttgtggcatctggaaatcggacagatatttccttagat
gatcccaacttctggcaaaaatgggctaaaaaggcagaaatagatatagatgccatcaat
ggcagaaacagcttggttattgacactccaagaattaggaagcaaacaagaccctttagt
gccacaaaagatgaattggctgaattatctgaagccgaaagtgaaggagatgaaaagccc
aaactccggagaccctgtgaccgttccaatggctatggaagaactgaatgctttagagta
gagaaaaatcttctagtttatggatggggccgatggagagaaattctgtcccatggccgt
tttaaaagacagctgaatgaacatgatgtagaaataatttgccgtgccctcttagcatac
tgccttgttcactaccgaggagatgagaaaattaaaggcttcatatgggatcttatcact
ccaactgaagatgggcaaacacgagagctacaaaatcatctaggcctatcagcccctgtg
cccagaggtcgaaaagggaagaaagtaaaaactcaaacaagctcatttgatatacagaaa
gcagaatggcttcgaaaatacaatcctgaacagctacttcaagatgaaggatacaaaaaa
catataaaacaccactgtaataaagttttgcttcgtgtgagaatgctgtattatctaaag
caagaagtcattggaaatgagtgtcagaaagtatttgatggagttgatgcaagtgacatt
gatgtttgggtcccagaaccagaccactcagaagttcctgctgaatggtgggattttgat
gctgataagtcacttcttattggagtttttaaacatggttatgaaaaatataacactatc
cgagcagacccagcattatgcttcttggaaagagtgggaaaacctgatgagaaagcagtt
gctgctgaacagagggcaaatgattatatggatggggatgtggaagatccagaatacaaa
cctgcaccagctatctttaaagatgatatagaggatgatgtttcttcaccaggagatctt
gttatagcagatggagatggtcaactgatggagggtgataaaatttattggccaactcag
tcagctttaactacacgtttgaggcgtctcatcactgcgtatcagcgtactaataaaaac
agacaaatccagcagatacagcctactttctcagtgcctgccagtgtaatgcagcctctt
tatgaagaagccactctcaatcctaaaatggcagccaagatagaaagacagcagagatgg
acaagaagagaagaagctgacttttacagagttgtgtctacatttggagtggtatttgac
cctgatagaggccaatttgattggacaaaatttagagctatggctaggctgcataagaag
actgatgatagcttggagaagtatttgtatgcattcatgtctatgtgtcggagggtttgt
cgtcttccttccaaagaagaattggtggatccaaatatttttatccaaccaatcacagaa
gaacgtgcttctaggactttgtatcggattgaacttctaaggaaagtacgagaacaggcc
ctccgacatccacaattgtttgaacgcttgaagctttgccatccaaacccagacttacca
gtctggtgggaatgtggccctcatgacagggacttgctcattggagctgctaaacatggg
gtgagccgaacagactatcacattcttcgtgatcctgaactctcctttatggcagctcaa
aggaactacagtcaaagtaagatggctcattcaaggacttctaccccacttttacagcaa
tatcaagtagcactttctgcttctcctcttacctctctacctaggctcctagatgctaaa
ggtattattctagaggatatgaaagttaaaagtgaaaatcttaaagaggagcctcagtct
tctgaagaagaatctatgtcttctgaggaaaccaggacactaataaagtctgagcctgta
agtccaaagaacggtgttctaccgcaggccactggagaccagaaatctggtggaaaaggt
gaaacagacagacgcatggttgcagccagaacagaacccctaactccaaacccagcttct
aagaaacagcgagtccacaaaagaggatccgaatctagttctgagtctgactctgattct
gagagatcatcctgttcttccagatcatcttcttcctcgtcttcctcctcttcttgttcc
cactctcgatcaggctctagttcttcttcttcatcctcttgttcttcagcatcgtcttca
tcctcatcctcatcctcttcctcatcatcctcctcttcatcttcatcagaagaaagtgac
agtgaagaagaagaagtccaaaagcgagcagaaggtacccctcacgtgaaagcctatgat
gaagaaagcgtcgcatcactgagcactacccaggacgagacacaggatagtttccagatg
aacaatgggacgccagagtctgcctacatcttacaagggggatacatgctagcagcttca
tattggccaaaggaccgtgtgatgatcaatcggctggacagtatttgtcaaacagtgctg
aaagggaagtggccttcagctagaagaagttatgatgccaacacagtggcttctttctat
accacaaaactgctggacagtcctggcgcagctacagaatatagcgaacctggtgtaccc
actcccccaggtgccggtggtaaagaagaacatgatcagtcaacacagatgtcaaaggtg
aagaagcatgtacgagaaaaggagtttacagtgaaaatcaaagacgaaggtggtttgaag
ttgacatttcagaagcaggggcttgctcagaaaagaccattcgacagtgaagatggtgct
ctggggcagcagcagtacctcgctcggcttcgcgagctacagagtgcatcagagaccagc
ctcgccaattttcccaaatccatgccagtatcaggtacttccattcagtcaacccttggt
gccaatggagttagattagacaaccagcccatagtcaaaaaaaggcggggaaggaggaag
aatgtcgaaggtgttgacatcctcttttttaacagaaataaaccacctaatcatgttact
ttaggcttaaccacctcacagatttctacagggataaatccagcactgtcctatactcaa
cctcaaggaattcctgatacagaaagtccagttccagttattaacctcaaagatgggaca
agacttgcaggcgatgatgcgccaaagagaaaggatttggaaaaatggcttaaggagcat
ccaggttatgtggaagatttgggagcttttattcctagagtgcagctccatgaagggagg
cccaaacaaaaaaggcatcgttgcagaaatcctaacaaactcgatgttaatagtcttact
ggagaagaacgtgttcaactgattaacagaagaaatgccagaaaggttggaggtgcattt
gctcctcctttgaaagatttatgtagattcctgaaagaaaattcagaatatggagtagct
cctgaatggggagatgttgttaagcagtccggatttcttccagaaagtatgtatgagcgt
attctcactggtcctgttgtgagagaggaagtcagcaggcgagggcgacggcctaaaagt
ggaattgccaaggccacagcggcagcagcggcagcggcaactgccaccagtgcgtcaggc
aatcctttgttagccaacggattacttccaggtgtggatctcacaacccttcaggcctta
caacaaaacctacaaaacttgcagtccctgcaagtaaccgcagggctgatgggaatgcct
gctggcctttcttctggaggagaagctaaaaacatggccgccatgtttcccatgctgctg
tcaggaatgactggcttaccaaatctgctgggcatgggaggactcctgacaaagcctacc
gaatctggaacagaagagaaaaagggaaatgactcaaaggagctagaaggaaaaaaagaa
aggacagagagtcaaaattcagagaatgggggagaaaactctgtgtcaagttctccttcc
acatcctctactgctgcattaaatacagctgcagctgccaacccattagctcttaaccca
ctactgctatctaatatactctatccagggatgctgctcactccaggccttaatctccat
atgccaactttgtcccagtccaatacttttgatgtacagaaaaacaaaaacaatgactta
ggctcatctaagtccctagaagtaaaggaggaagattctagagttagagatcaggaagac
aaagggggaactgaaccaagtcctctcaatgagaacagcacagatgagggttcagagaaa
gccgatgcttcatctggatctgacagtacgtcatcgtcatccgaggattcagattctagt
aacgaagactga
DBGET
integrated database retrieval system
