Vulpes lagopus (Arctic fox): 121497116
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Entry
121497116 CDS
T07435
Symbol
RIMS1
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1 isoform X1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg04517
IgSF CAM signaling
vlg04721
Synaptic vesicle cycle
vlg04723
Retrograde endocannabinoid signaling
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121497116 (RIMS1)
09150 Organismal Systems
09156 Nervous system
04723 Retrograde endocannabinoid signaling
121497116 (RIMS1)
04721 Synaptic vesicle cycle
121497116 (RIMS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vlg04131
]
121497116 (RIMS1)
Membrane trafficking [BR:
vlg04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
121497116 (RIMS1)
Small GTPases and associated proteins
Rab associated proteins
121497116 (RIMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
PDZ
FYVE_2
PDZ_6
Zn_ribbon_Nudix
Motif
Other DBs
NCBI-GeneID:
121497116
NCBI-ProteinID:
XP_041622199
LinkDB
All DBs
Position
1:complement(38296320..38774046)
Genome browser
AA seq
1663 aa
AA seq
DB search
MSSAVGPRGPRPPTVPPPMQELPDLSHLTEEERNIIMAVMDRQKEEEEKEEAMLKCVVRD
MAKPAACKTPRNAENQPHQPSPRLHQQFESYKEQVRKIGEEARRYQGEHKDDAPTCGICH
KTKFADGCGHLCSYCRTKFCARCGGRVSLRSNNEDKVVMWVCNLCRKQQEILTKSGAWFF
GSGPQQPSQDGTLSDTATGAGSEVPREKKARLQERSRSQTPLSTAAASSQDTAPPSAQPD
RSKGAESSQQAVGPEQKQVSSRSRSEPPRERKKTAGLSEQNGKGAQKSERKRVPKSSVQP
GEGAVEDRERKERRESRRLEKGRSQDFPDVPEKREDRKAAEDEKQRKEEEYQTRYRSDPN
LARYPVKPPPEEQQMRMHARVSRARHERRHSDVALPRTEAGAPPPDSKAGKRAPAAARAS
PPESPRAYSAERTAEARAPGAKQLTNHSPPAPRHGPVPAEALEPKAQEPLRKQSRLDPSS
AVLIRKSKREKVETMLRNDSLSSDQSESVRPSPPKPHRSKRGGKKRQMSVSSSEEEGVST
PEYTSCEDVELESESVSEKGDLDYYWLDPATWHSRETSPISSHPVTWQPSKEGDRLIGRV
ILNKRTTMPKESGALLGLKVVGGKMTDLGRLGAFITKVKKGSLADVVGHLRAGDEVLEWN
GKPLPGATNEEVYNIILESKSEPQVEIIVSRPIGDIPRIPESSHPPLESSSSSFESQKME
RPSISVISPTSPGALKDAPQVLPGQLSVKLWYDKVGHQLIVNVLQATDLPTRVDGRPRNP
YVKMYFLPDRSDKSKRRTKTVKKVLEPKWNQTFVYSHVHRRDFRERMLEITVWDQPRVQE
EESEFLGEILIELETALLDDEPHWYKLQTHDESSLPLPQPSPFMPRRHIHGESSSKKLQR
SQRISDSDISDYEVDDGIGVVPPGYRSSARESKSTTLTVPEQQRTTHHRSRSVSPHRGDD
QGRPRSRLPNVPLQRSLDEIHPTRRSRSPTRHHDASRSPVDHRSRDVDSQYLSEQDSELL
MLPRAKRGRSAECLHTTRHFVRHYKTLPPKMPLLENGSHWNIYSELQPSLDRARSASTNC
LRPDTSLHSPERERGRWSPSLDRRRPPSPRIQIQHASPENDRHSRKSDRSSIQKQTRKGT
ASDAERVLPPCLSRRGYAALRATDQPVLRGKHPARSRSSEHSSVRALCSTHHLAPGGSAP
PSPLLTRMHRQASPTHPPPSDTSFSSRRGRQLPQVPVRSGSIEQEQEKYNSSTKASLVVE
ERTRQMKMKVHRFKQTTGSGSSQELDREQYSKYSIHKDQYRSCDNVSAKSSDSDVSDVSA
ISRTSSASRLSSTSFMSEQSEHPRGRISSFTPKMQGRRMGTSGRAITKSTSVSGEMYTLE
HNDGSQSDTAVGTVGAGGKKRRSSLSAKVVAIVSRRSRSTSQLSQTESGHKKLKSTIQRS
TETGMAAEMRKMVRQPSRESTDGSINSYSSEGNLIFPGVRLGADSQFSDFLDGLGPAQLV
GRQTLATPAMGDIQIGMEDKKGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIA
KKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDYGRMDHKCFMGVAQILLEELDLS
SMVIGWYKLFPPSSLVDPTLTPLTRRASQSSLESSTGPPCIRS
NT seq
4992 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcggccgtggggccccgcggtcctcgcccacccacggtgcccccccccatgcaa
gagctgcccgacctgagccacctgaccgaggaggagaggaacattatcatggcagtgatg
gaccggcagaaggaagaggaggaaaaagaagaagccatgctcaagtgtgttgtcagggac
atggcgaagcctgctgcctgcaaaacaccaagaaatgctgaaaaccagccccaccaacct
tcaccgagattgcatcaacaatttgaaagctataaagaacaagtgagaaaaataggggaa
gaagcacggcgttaccagggagagcacaaagatgatgctccgacttgtggaatctgtcat
aagacaaagtttgctgatgggtgtggccatctctgctcctactgccgcaccaagttctgt
gctcgctgtggaggccgcgtgtctctgcgatccaacaacgaggacaaagtggttatgtgg
gtatgcaatttatgtcgaaagcaacaagaaatcttaaccaaatctggggcatggttcttt
ggaagtggccctcagcagccaagtcaggatggaaccctaagtgatacagctacaggtgct
ggttctgaggtaccaagagaaaagaaagcacggctccaagagcgatcacggtctcagaca
cccctgagcacggcagctgcctcctcccaggacacagctcctcccagcgcacaaccagac
aggagcaagggggctgagtcctcacagcaagctgtggggcctgaacagaagcaggtttca
tccaggtctagaagtgaacctccaagagagaggaagaagactgcggggctctctgagcag
aacggcaagggagcccagaagagcgagcggaaacgcgtgcccaagtcctccgtgcagcct
ggagagggggccgtggaagaccgggagcggaaagaaaggcgggaaagccgaaggctcgag
aaagggcggtcacaggacttcccggacgtgccagaaaaacgagaggaccgcaaagcggcg
gaagatgagaagcaaaggaaagaggaggagtaccagaccaggtaccgcagcgacccgaac
ctggcgcggtacccggtgaaaccgccgcccgaggagcagcagatgcgcatgcacgcccgg
gtgtcccgcgcgaggcacgagcggcgccacagcgacgtggcgctcccgcgcaccgaggcg
ggcgccccgccgcccgacagcaaggccggcaagcgcgcgccggccgccgccagggcctcg
ccgcccgagtcgccgcgggcctactcggccgagaggaccgcggaagccagggcgccgggc
gccaagcagctcacgaaccacagcccgccggcaccccggcatgggccggtccccgcagaa
gccctggagcccaaagcccaggagccgctcaggaagcagagccgcctggaccccagctcg
gccgtcctcatcaggaagtccaagcgcgagaaggtggagaccatgctgcggaacgactcc
ttgagctccgatcagtccgagtcggtgcggccgtctccgcccaagccgcaccggtccaag
aggggcggcaagaagcggcagatgtcggtgagcagctccgaggaggagggcgtgtccacg
ccggagtacaccagctgcgaagacgtggagctcgagagcgagagcgtcagcgagaaaggt
gatttggattattactggttggatcctgctacgtggcatagccgggaaacatcacctatt
agttcgcatcctgtaacgtggcagccatctaaagaaggagaccgattaattggacgtgtt
attcttaacaagagaacaaccatgcccaaagaatcaggtgcattactgggtctgaaagtt
gttggaggaaaaatgactgatttaggacgtcttggtgccttcatcaccaaagtaaagaag
ggtagccttgcagatgtagttggacacttgagagcaggggatgaagttctagaatggaat
ggtaaacccctgccgggagctacaaatgaagaagtttacaacattattttagaatcaaaa
tcagaacctcaagttgaaattattgtttcaaggcctattggtgacattccacggattcct
gagagctcccatcctccactggagtccagttcaagttcctttgagtctcagaagatggaa
aggccttccatttctgttatttctccaacaagtcctggagctctaaaagatgccccacaa
gtcttgccaggacaactttctgtgaagctgtggtatgataaagtgggacaccagctgatt
gtaaatgttctgcaagcaacagatttacctactagagtagatgggcgtcccaggaatccc
tacgtgaaaatgtattttcttccagatagaagtgataaaagcaaaaggaggaccaaaaca
gtaaagaaagtcctagaaccaaaatggaatcaaacatttgtctattcacatgtacatcgt
agagattttagagaacggatgttagaaataactgtgtgggatcaaccaagagtacaagaa
gaagagagtgaatttcttggagagatcctcatagaattggagacagcacttttagatgat
gaaccacattggtataaacttcagacacatgatgaatcctcactacctctgcctcagcca
tcaccattcatgccaaggcgacacattcatggagaaagctctagcaaaaaactacaaaga
tctcagcgaatcagtgatagtgacatctcagattatgaggttgatgatggtattggagta
gttcctccaggttataggtctagtgctagagaaagtaaatctacaacattaactgtgcca
gaacagcaaagaacaactcatcaccgctcacgttcagtatctcctcaccgcggcgatgat
cagggaaggccgcgttcacgtttaccaaatgtgccattacagaggagtttagatgaaatt
catccaacaagaaggtcacgttctccaactagacaccatgatgcctcccgaagtccagtt
gatcacagatccagagatgtggatagtcagtatttatcagaacaagacagtgagcttctt
atgctgcccagagcaaaacgaggacgaagtgcagaatgcctacatacaaccagacatttt
gttaggcactataaaacattaccgcctaagatgcctttgttagagaacggttctcactgg
aatatttacagtgaactgcagccctctcttgacagggctaggagtgctagtaccaactgc
ttgagaccagatactagtttgcattcaccagaacgagaaaggggtagatggtccccctcc
ctagataggagacgacctcctagtcccaggattcaaatccagcatgcatctccggagaat
gacaggcactccagaaagtctgacagatctagcatccaaaaacagactaggaaaggcact
gcctctgatgcagaaagggttctcccaccatgcctttctagaaggggatacgcagcccta
agagcgactgatcagccagtccttaggggaaaacatcccgctcgctcaaggtcgagtgag
cactctagtgtcagagcactgtgttctacccaccaccttgcccctggagggtcggcgcca
ccttctccgcttctgacaagaatgcacagacaagcaagtccaacccatcctcctccttca
gacacatccttcagcagtcggaggggacgacagctcccacaggtgccagtgagaagcggc
agtatagaacaagaacaagaaaaatataactcttccacaaaagcaagcttagtagtggag
gagcgaacaagacagatgaaaatgaaagtccatcgatttaagcagacaacagggtctggt
tctagtcaagaacttgatcgcgagcaatattccaagtatagcatacataaagatcagtac
agaagctgtgataacgtctctgccaaatcatcagatagtgatgtcagtgatgtgtccgcc
atttcccgaaccagcagtgcctcacgcctcagcagcacaagctttatgtcagagcaatct
gagcaccccaggggtagaatcagttcatttacccctaaaatgcaaggcagacggatgggg
acttcaggaagagccatcacgaagagcaccagtgtgagtggggagatgtacacactggag
cataatgatggcagtcagtccgacacggctgtgggtacagttggagcaggtggaaagaaa
aggagatccagcctgagtgccaaagtggttgccatagtatctagaaggagtagaagcaca
tctcaactaagccaaacagagtcaggccacaagaagttaaaaagtaccatccagagaagc
acagaaacaggaatggcagctgaaatgaggaagatggtaaggcaaccaagtcgagagtct
actgatggcagcatcaacagttacagctccgagggaaacttaatatttcctggagtacga
ctaggagcagacagtcaattcagtgattttcttgatggattgggaccagctcagctagtt
ggccgtcaaacccttgccacccctgcaatgggtgacatacaaattggaatggaggataaa
aagggccaattagaagttgaagttattagagcacgaagtctcacgcaaaaacctggttcc
aagtctacacctgctccatacgtcaaagtatatcttttggaaaacggggcctgtatagcc
aaaaagaagacaagaattgcacgaaaaacccttgatcctttatatcaacagtccctggtt
tttgatgaaagtccacagggtaaagttcttcaggtgatcgtctggggggactatggcaga
atggaccataaatgctttatgggtgtggcacagatcttgctggaagaacttgatctctcc
agtatggtaattggatggtacaagttgttcccaccatcatccctggtggatcccacactc
actcccttgacccgccgggcttcccagtcatctctggaaagttcaactgggcctccctgc
atccgctcatag
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integrated database retrieval system
