Vulpes lagopus (Arctic fox): 121497116
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Entry
121497116 CDS
T07435
Symbol
RIMS1
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1 isoform X1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg04721
Synaptic vesicle cycle
vlg04723
Retrograde endocannabinoid signaling
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09150 Organismal Systems
09156 Nervous system
04723 Retrograde endocannabinoid signaling
121497116 (RIMS1)
04721 Synaptic vesicle cycle
121497116 (RIMS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vlg04131
]
121497116 (RIMS1)
Membrane trafficking [BR:
vlg04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
121497116 (RIMS1)
Small GTPases and associated proteins
Rab associated proteins
121497116 (RIMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
PDZ
FYVE_2
PDZ_6
Zn_ribbon_Nudix
Motif
Other DBs
NCBI-GeneID:
121497116
NCBI-ProteinID:
XP_041622199
LinkDB
All DBs
Position
1:complement(38296320..38774046)
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AA seq
1663 aa
AA seq
DB search
MSSAVGPRGPRPPTVPPPMQELPDLSHLTEEERNIIMAVMDRQKEEEEKEEAMLKCVVRD
MAKPAACKTPRNAENQPHQPSPRLHQQFESYKEQVRKIGEEARRYQGEHKDDAPTCGICH
KTKFADGCGHLCSYCRTKFCARCGGRVSLRSNNEDKVVMWVCNLCRKQQEILTKSGAWFF
GSGPQQPSQDGTLSDTATGAGSEVPREKKARLQERSRSQTPLSTAAASSQDTAPPSAQPD
RSKGAESSQQAVGPEQKQVSSRSRSEPPRERKKTAGLSEQNGKGAQKSERKRVPKSSVQP
GEGAVEDRERKERRESRRLEKGRSQDFPDVPEKREDRKAAEDEKQRKEEEYQTRYRSDPN
LARYPVKPPPEEQQMRMHARVSRARHERRHSDVALPRTEAGAPPPDSKAGKRAPAAARAS
PPESPRAYSAERTAEARAPGAKQLTNHSPPAPRHGPVPAEALEPKAQEPLRKQSRLDPSS
AVLIRKSKREKVETMLRNDSLSSDQSESVRPSPPKPHRSKRGGKKRQMSVSSSEEEGVST
PEYTSCEDVELESESVSEKGDLDYYWLDPATWHSRETSPISSHPVTWQPSKEGDRLIGRV
ILNKRTTMPKESGALLGLKVVGGKMTDLGRLGAFITKVKKGSLADVVGHLRAGDEVLEWN
GKPLPGATNEEVYNIILESKSEPQVEIIVSRPIGDIPRIPESSHPPLESSSSSFESQKME
RPSISVISPTSPGALKDAPQVLPGQLSVKLWYDKVGHQLIVNVLQATDLPTRVDGRPRNP
YVKMYFLPDRSDKSKRRTKTVKKVLEPKWNQTFVYSHVHRRDFRERMLEITVWDQPRVQE
EESEFLGEILIELETALLDDEPHWYKLQTHDESSLPLPQPSPFMPRRHIHGESSSKKLQR
SQRISDSDISDYEVDDGIGVVPPGYRSSARESKSTTLTVPEQQRTTHHRSRSVSPHRGDD
QGRPRSRLPNVPLQRSLDEIHPTRRSRSPTRHHDASRSPVDHRSRDVDSQYLSEQDSELL
MLPRAKRGRSAECLHTTRHFVRHYKTLPPKMPLLENGSHWNIYSELQPSLDRARSASTNC
LRPDTSLHSPERERGRWSPSLDRRRPPSPRIQIQHASPENDRHSRKSDRSSIQKQTRKGT
ASDAERVLPPCLSRRGYAALRATDQPVLRGKHPARSRSSEHSSVRALCSTHHLAPGGSAP
PSPLLTRMHRQASPTHPPPSDTSFSSRRGRQLPQVPVRSGSIEQEQEKYNSSTKASLVVE
ERTRQMKMKVHRFKQTTGSGSSQELDREQYSKYSIHKDQYRSCDNVSAKSSDSDVSDVSA
ISRTSSASRLSSTSFMSEQSEHPRGRISSFTPKMQGRRMGTSGRAITKSTSVSGEMYTLE
HNDGSQSDTAVGTVGAGGKKRRSSLSAKVVAIVSRRSRSTSQLSQTESGHKKLKSTIQRS
TETGMAAEMRKMVRQPSRESTDGSINSYSSEGNLIFPGVRLGADSQFSDFLDGLGPAQLV
GRQTLATPAMGDIQIGMEDKKGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIA
KKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDYGRMDHKCFMGVAQILLEELDLS
SMVIGWYKLFPPSSLVDPTLTPLTRRASQSSLESSTGPPCIRS
NT seq
4992 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcggccgtggggccccgcggtcctcgcccacccacggtgcccccccccatgcaa
gagctgcccgacctgagccacctgaccgaggaggagaggaacattatcatggcagtgatg
gaccggcagaaggaagaggaggaaaaagaagaagccatgctcaagtgtgttgtcagggac
atggcgaagcctgctgcctgcaaaacaccaagaaatgctgaaaaccagccccaccaacct
tcaccgagattgcatcaacaatttgaaagctataaagaacaagtgagaaaaataggggaa
gaagcacggcgttaccagggagagcacaaagatgatgctccgacttgtggaatctgtcat
aagacaaagtttgctgatgggtgtggccatctctgctcctactgccgcaccaagttctgt
gctcgctgtggaggccgcgtgtctctgcgatccaacaacgaggacaaagtggttatgtgg
gtatgcaatttatgtcgaaagcaacaagaaatcttaaccaaatctggggcatggttcttt
ggaagtggccctcagcagccaagtcaggatggaaccctaagtgatacagctacaggtgct
ggttctgaggtaccaagagaaaagaaagcacggctccaagagcgatcacggtctcagaca
cccctgagcacggcagctgcctcctcccaggacacagctcctcccagcgcacaaccagac
aggagcaagggggctgagtcctcacagcaagctgtggggcctgaacagaagcaggtttca
tccaggtctagaagtgaacctccaagagagaggaagaagactgcggggctctctgagcag
aacggcaagggagcccagaagagcgagcggaaacgcgtgcccaagtcctccgtgcagcct
ggagagggggccgtggaagaccgggagcggaaagaaaggcgggaaagccgaaggctcgag
aaagggcggtcacaggacttcccggacgtgccagaaaaacgagaggaccgcaaagcggcg
gaagatgagaagcaaaggaaagaggaggagtaccagaccaggtaccgcagcgacccgaac
ctggcgcggtacccggtgaaaccgccgcccgaggagcagcagatgcgcatgcacgcccgg
gtgtcccgcgcgaggcacgagcggcgccacagcgacgtggcgctcccgcgcaccgaggcg
ggcgccccgccgcccgacagcaaggccggcaagcgcgcgccggccgccgccagggcctcg
ccgcccgagtcgccgcgggcctactcggccgagaggaccgcggaagccagggcgccgggc
gccaagcagctcacgaaccacagcccgccggcaccccggcatgggccggtccccgcagaa
gccctggagcccaaagcccaggagccgctcaggaagcagagccgcctggaccccagctcg
gccgtcctcatcaggaagtccaagcgcgagaaggtggagaccatgctgcggaacgactcc
ttgagctccgatcagtccgagtcggtgcggccgtctccgcccaagccgcaccggtccaag
aggggcggcaagaagcggcagatgtcggtgagcagctccgaggaggagggcgtgtccacg
ccggagtacaccagctgcgaagacgtggagctcgagagcgagagcgtcagcgagaaaggt
gatttggattattactggttggatcctgctacgtggcatagccgggaaacatcacctatt
agttcgcatcctgtaacgtggcagccatctaaagaaggagaccgattaattggacgtgtt
attcttaacaagagaacaaccatgcccaaagaatcaggtgcattactgggtctgaaagtt
gttggaggaaaaatgactgatttaggacgtcttggtgccttcatcaccaaagtaaagaag
ggtagccttgcagatgtagttggacacttgagagcaggggatgaagttctagaatggaat
ggtaaacccctgccgggagctacaaatgaagaagtttacaacattattttagaatcaaaa
tcagaacctcaagttgaaattattgtttcaaggcctattggtgacattccacggattcct
gagagctcccatcctccactggagtccagttcaagttcctttgagtctcagaagatggaa
aggccttccatttctgttatttctccaacaagtcctggagctctaaaagatgccccacaa
gtcttgccaggacaactttctgtgaagctgtggtatgataaagtgggacaccagctgatt
gtaaatgttctgcaagcaacagatttacctactagagtagatgggcgtcccaggaatccc
tacgtgaaaatgtattttcttccagatagaagtgataaaagcaaaaggaggaccaaaaca
gtaaagaaagtcctagaaccaaaatggaatcaaacatttgtctattcacatgtacatcgt
agagattttagagaacggatgttagaaataactgtgtgggatcaaccaagagtacaagaa
gaagagagtgaatttcttggagagatcctcatagaattggagacagcacttttagatgat
gaaccacattggtataaacttcagacacatgatgaatcctcactacctctgcctcagcca
tcaccattcatgccaaggcgacacattcatggagaaagctctagcaaaaaactacaaaga
tctcagcgaatcagtgatagtgacatctcagattatgaggttgatgatggtattggagta
gttcctccaggttataggtctagtgctagagaaagtaaatctacaacattaactgtgcca
gaacagcaaagaacaactcatcaccgctcacgttcagtatctcctcaccgcggcgatgat
cagggaaggccgcgttcacgtttaccaaatgtgccattacagaggagtttagatgaaatt
catccaacaagaaggtcacgttctccaactagacaccatgatgcctcccgaagtccagtt
gatcacagatccagagatgtggatagtcagtatttatcagaacaagacagtgagcttctt
atgctgcccagagcaaaacgaggacgaagtgcagaatgcctacatacaaccagacatttt
gttaggcactataaaacattaccgcctaagatgcctttgttagagaacggttctcactgg
aatatttacagtgaactgcagccctctcttgacagggctaggagtgctagtaccaactgc
ttgagaccagatactagtttgcattcaccagaacgagaaaggggtagatggtccccctcc
ctagataggagacgacctcctagtcccaggattcaaatccagcatgcatctccggagaat
gacaggcactccagaaagtctgacagatctagcatccaaaaacagactaggaaaggcact
gcctctgatgcagaaagggttctcccaccatgcctttctagaaggggatacgcagcccta
agagcgactgatcagccagtccttaggggaaaacatcccgctcgctcaaggtcgagtgag
cactctagtgtcagagcactgtgttctacccaccaccttgcccctggagggtcggcgcca
ccttctccgcttctgacaagaatgcacagacaagcaagtccaacccatcctcctccttca
gacacatccttcagcagtcggaggggacgacagctcccacaggtgccagtgagaagcggc
agtatagaacaagaacaagaaaaatataactcttccacaaaagcaagcttagtagtggag
gagcgaacaagacagatgaaaatgaaagtccatcgatttaagcagacaacagggtctggt
tctagtcaagaacttgatcgcgagcaatattccaagtatagcatacataaagatcagtac
agaagctgtgataacgtctctgccaaatcatcagatagtgatgtcagtgatgtgtccgcc
atttcccgaaccagcagtgcctcacgcctcagcagcacaagctttatgtcagagcaatct
gagcaccccaggggtagaatcagttcatttacccctaaaatgcaaggcagacggatgggg
acttcaggaagagccatcacgaagagcaccagtgtgagtggggagatgtacacactggag
cataatgatggcagtcagtccgacacggctgtgggtacagttggagcaggtggaaagaaa
aggagatccagcctgagtgccaaagtggttgccatagtatctagaaggagtagaagcaca
tctcaactaagccaaacagagtcaggccacaagaagttaaaaagtaccatccagagaagc
acagaaacaggaatggcagctgaaatgaggaagatggtaaggcaaccaagtcgagagtct
actgatggcagcatcaacagttacagctccgagggaaacttaatatttcctggagtacga
ctaggagcagacagtcaattcagtgattttcttgatggattgggaccagctcagctagtt
ggccgtcaaacccttgccacccctgcaatgggtgacatacaaattggaatggaggataaa
aagggccaattagaagttgaagttattagagcacgaagtctcacgcaaaaacctggttcc
aagtctacacctgctccatacgtcaaagtatatcttttggaaaacggggcctgtatagcc
aaaaagaagacaagaattgcacgaaaaacccttgatcctttatatcaacagtccctggtt
tttgatgaaagtccacagggtaaagttcttcaggtgatcgtctggggggactatggcaga
atggaccataaatgctttatgggtgtggcacagatcttgctggaagaacttgatctctcc
agtatggtaattggatggtacaagttgttcccaccatcatccctggtggatcccacactc
actcccttgacccgccgggcttcccagtcatctctggaaagttcaactgggcctccctgc
atccgctcatag
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integrated database retrieval system
