Vulpes lagopus (Arctic fox): 121497187
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Entry
121497187 CDS
T07435
Name
(RefSeq) protocadherin beta-4
KO
K16494
protocadherin beta
Organism
vlg
Vulpes lagopus (Arctic fox)
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
vlg04515
]
121497187
Cell adhesion molecules [BR:
vlg04515
]
Cadherins
Protocadherins
121497187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
121497187
NCBI-ProteinID:
XP_041622403
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Position
8:85547551..85556085
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AA seq
795 aa
AA seq
DB search
METLERIQPNRQVMAFILMVFLSQARAEPIRYSVMEETESGSFVAHLTEDLGLGMGELAA
RSARVVSDDDKQRLQLDRQTGDLLLREKLDREELCGPVEPCVLHFQVFLETPVQFFEGEL
SIQDVNDHSPVFPTREMLLKIPENSPPGTLFPLKLAQDLDVGSNGLQKYTISPNSHFHVL
TRNHSEGKKYPDLVQDKALDREEQPEFSLTLMALDGGSPPRSGTTAVRILIMDVNDNAPE
FVHSPYEVQVLENSSLDSPVLSVSARDADAGNFGSVSYGLFQASDEIKQTFSINEVTGEI
RLTKKLDFEQIKSYHVEIEAVDGGGLSGKGTVVIYVVDMNDNAPELTISSVTSSIPENAP
ETVVSVFRIRDRDSGDNGKMICSIPENLPFLLKPTFKNFYTLVTESPLDRESQAEYNITI
TVSDLGTPRLQTQHTITVTVSDVNDNAPAFSQTTYTLRVRENNSPALHIGTVSATDRDAG
ANAQVTYSLLPPRDPQLPLASLVSINADNGQLFALRSLDYEALQAFEVRVGAADRGSPAL
SSQALVRVLVLDDNDNAPFVLYPLQNGSAPCTELVPRAAEAGYLVTKVVAVDGDSGQNAW
LSFQLLKATEPGLFGVWAHNGEVRTARLLSERDAVRHRLLVLVKDNGEPPLSASVTLHVL
LVDGFSQPYLPLPDVAAAEARADPLTVYLVIALASVSSLFLCSALAFVAVRLCRRSGAAS
GGGCAVPEGHFPGHLVDVSGAGTLSQSYQYDVCLTGVPRTGEFKFLKPIFPNLLIEDSER
EIKENSNCRNSFVFS
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggagacactagagagaattcaaccaaacaggcaagtgatggcctttattttgatggtg
ttcttgtctcaggctcgcgccgagcctattcgttattctgtgatggaagaaacagagagt
ggctcctttgtagcccatctgacagaggatctgggcttggggatgggggaactggcagcc
aggtcggcccgggtggtgtctgacgatgacaagcagcgcttgcagctggatcgtcagact
ggagatttgcttttgagggagaaactagaccgggaagagctatgtggccctgttgaaccg
tgtgtactgcatttccaagtatttctagaaactccagttcagttttttgaaggagaatta
tcaatccaggacgtaaatgaccactccccagtattcccgactagggaaatgctcttgaaa
ataccggaaaacagcccgccagggactctctttccgttgaaattggctcaggatttggat
gtgggcagcaatggtcttcaaaaatacacgatcagccccaattctcattttcatgttcta
acccgaaatcatagtgagggcaagaaatacccagatttggtgcaggacaaagcactggat
cgagaagagcagcctgagttcagcttaaccctcatggcactggatggtgggtctccacct
aggtctggcaccactgcagtgagaatcctgattatggacgtcaatgacaatgctccagag
tttgtgcactccccatatgaggtgcaggtcttggaaaacagctccttagactccccagta
cttagtgtctcggctagagatgcagatgctggaaacttcgggagtgtttcctatggcttg
ttccaagcatcagatgaaattaagcaaactttctcaataaatgaagtcacaggagaaatc
cgactgacaaagaaactggattttgaacaaattaaatcttaccacgtggaaattgaggct
gttgatggaggaggcctttctggaaaaggcactgtagtcatatatgtggtggatatgaat
gacaacgcccctgaacttaccatatcttcagtcaccagctctatcccagaaaatgctcct
gagactgtagtgtctgtcttcagaattcgagatagagactctggagacaatggaaagatg
atttgctctattcccgaaaatctgcctttccttctgaaaccgactttcaagaatttctac
accctggtaacagagagccccctcgacagagagagccaggcggagtacaacatcaccatc
accgtcagtgacttggggacccccaggctgcaaacccagcacaccatcaccgtgacggtc
tccgacgtcaacgacaacgcccccgccttcagccagaccacctacaccctgcgcgtccgc
gagaacaacagccccgccctgcacatcggcaccgtgagcgccaccgacagggacgcgggc
gccaacgcccaggtcacctactcgctgctgccgccccgggacccgcagctgccgctcgcc
tcgctggtgtccatcaacgcggacaacgggcagctgttcgcgctcaggtccctggattac
gaggcgctgcaggccttcgaggtccgcgtgggcgcggccgaccgcggctcgcccgcgctg
agcagccaggcgctggtgcgcgtgctggtgctggacgacaacgacaacgcgcccttcgtg
ctgtacccgctgcagaacggctctgcgccctgcaccgagctggtgccgcgggcggccgag
gcgggctacctggtgaccaaggtggtggcggtggacggcgactcgggccagaacgcctgg
ctgtcgttccagctgctcaaggccacggagcccgggctgttcggcgtgtgggcgcacaac
ggcgaggtgcgcacggcccggctgctgagcgagcgcgacgccgtcaggcacaggctgctg
gtgctggtcaaggacaatggcgagccgccgctgtcggccagcgtcacgctgcacgtgctg
ctggtggacggcttctcgcagccctacctgccgctgccggacgtggcggcggccgaggcc
cgggccgacccgctcaccgtctacctggtcatcgccttggcgtccgtgtcgtcgctcttc
ctgtgctcggcgctggcgttcgtggcggtgcggctgtgcaggaggagcggggcggcgtcg
gggggtggctgcgcggtgcccgagggccacttcccgggccacctggtggacgtcagcggc
gcggggaccctgtcccagagctaccagtatgatgtctgtctgaccggagtccctagaact
ggtgagttcaaatttctgaaaccgatatttcccaacctcttgattgaggacagtgagaga
gaaattaaagaaaactccaactgcaggaatagcttcgtattcagttaa
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