Vulpes lagopus (Arctic fox): 121497188
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Entry
121497188 CDS
T07435
Name
(RefSeq) protocadherin beta-3-like
KO
K16494
protocadherin beta
Organism
vlg
Vulpes lagopus (Arctic fox)
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
vlg04515
]
121497188
Cell adhesion molecules [BR:
vlg04515
]
Cadherins
Protocadherins
121497188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
121497188
NCBI-ProteinID:
XP_041622404
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Position
8:85537483..85544448
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AA seq
785 aa
AA seq
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MAESAMEARGDSFLRQRQVLFLFVFLGVSLAESESRRYSVVEETERGFLIANLAKDLGLG
VGELAVRGAQVVSKGNRQHIQLNPQNGDLLLHERLDREELCGPTEPCVLHFQILLQNPLQ
FITNELQVIDVNDHSPVFFEHEMQLKLLENTPPGTIIPLGNAEDLDVGRNSLQNYTITPN
SHFHVLTRSRRDGRKYPQLVLDKALDREEQPELILTLTALDGGSPPRSGIAQVHIVVLDI
NDNAPEFTQSLYEVQVLENSPINSVLVTVSASDLDTGNLGTVSYAFFHASEEIRKTFQLN
PITGDIQLVKHLNYEVMNTYEVDIEAKDGGGLSGKTTVIVQVVDVNDNPPELTLSSIASP
IPENSPETVVAVFSVSDPDSGDNGRITCSIESNLPFNLKPSEENFYTLVTKGALDRESQA
EYNITITVSDLGTPRLQTQHTITVTVSDVNDNAPAFSQTTYTLRVRENNSPALHIGTVSA
TDRDAGANAQVTYSLLPPRDPQLPLASLVSINADNGQLFALRSLDYEALQAFEVRVGAAD
RGSPALSSQALVRVLVLDDNDNAPFVLYPLQNGSAPCTELVPRAAEAGYLVTKVVAVDGD
SGQNAWLSFQLLKATEPGLFGVWAHNGEVRTARLLSERDAVRHRLLVLVKDNGEPPLSAS
VTLHVLLVDGFSQPYLPLPDVAAAEARADPLTVYLVIALASVSSLFLCSALAFVAVRLCR
RSGAASGGGCAVPEGHFPGHLVDVSGAGTLSQSYQYEVCLTGGTGTSEFKFLKPIIPSGL
FQDTE
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaagcgcaatggaggccagaggcgacagctttcttagacaaaggcaagttcta
tttctctttgtttttctgggtgtgtctctggctgagtctgagtcaagacgctactctgtg
gttgaggaaacggagaggggctttttaatagccaacctagcaaaggatctagggctaggg
gtgggggaactggctgtgaggggagcccaggttgtgtctaaagggaacagacagcatatt
cagctcaaccctcagaacggcgatctgctcctgcatgagagattggaccgggaagagcta
tgcggccccacggagccctgtgtactgcattttcagatattactgcaaaaccctttgcag
tttattacaaacgagcttcaggtcatagacgtaaatgaccattccccggtattctttgaa
catgaaatgcagctgaaactcttagaaaacacgccaccagggaccataattcctttggga
aatgctgaggacttggatgtgggaagaaacagtctccaaaactacacgatcactcctaat
tcccatttccacgttctcacacgcagtcgtagggatggaagaaagtatccacaactagtg
ctggacaaagcgctggaccgtgaggagcagccagagctcattttgactctcaccgcgttg
gatggtggctctccaccccggtcggggatcgcccaggttcacattgtggtcttagacata
aacgacaacgccccagaatttacacagtcactctatgaggttcaagttctagagaacagc
cccattaactctgttcttgtcaccgtctcagcttctgatttagatacaggaaatttgggg
acagtttcatacgcattttttcatgcttctgaagaaattcgcaaaacttttcagctaaat
ccaattactggtgatatccagctagtcaaacatttgaattatgaggttatgaatacctat
gaagtggacatagaagccaaggatggcggaggcctttcaggaaaaacaacagtaatagtt
caggtggttgatgtgaacgacaacccaccagaactgaccttgtcctcaatagccagccct
atccctgagaactcaccagagactgtggtggctgttttcagtgtttctgatccagactcc
ggagacaatggcagaattacgtgttccattgagagcaatctccctttcaacctcaaacca
tcagaagagaatttctataccttggtaacaaaaggggcgctggacagagagagccaggcg
gagtacaacatcaccatcaccgtcagtgacttggggacccccaggctgcaaacccagcac
accatcaccgtgacggtctccgacgtcaacgacaacgcccccgccttcagccagaccacc
tacaccctgcgcgtccgcgagaacaacagccccgccctgcacatcggcaccgtgagcgcc
accgacagggacgcgggcgccaacgcccaggtcacctactcgctgctgccgccccgggac
ccgcagctgccgctcgcctcgctggtgtccatcaacgcggacaacgggcagctgttcgcg
ctcaggtccctggattacgaggcgctgcaggccttcgaggtccgcgtgggcgcggccgac
cgcggctcgcccgcgctgagcagccaggcgctggtgcgcgtgctggtgctggacgacaac
gacaacgcgcccttcgtgctgtacccgctgcagaacggctctgcgccctgcaccgagctg
gtgccgcgggcggccgaggcgggctacctggtgaccaaggtggtggcggtggacggcgac
tcgggccagaacgcctggctgtcgttccagctgctcaaggccacggagcccgggctgttc
ggcgtgtgggcgcacaacggcgaggtgcgcacggcccggctgctgagcgagcgcgacgcc
gtcaggcacaggctgctggtgctggtcaaggacaatggcgagccgccgctgtcggccagc
gtcacgctgcacgtgctgctggtggacggcttctcgcagccctacctgccgctgccggac
gtggcggcggccgaggcccgggccgacccgctcaccgtctacctggtcatcgccttggcg
tccgtgtcgtcgctcttcctgtgctcggcgctggcgttcgtggcggtgcggctgtgcagg
aggagcggggcggcgtcggggggtggctgcgcggtgcccgagggccacttcccgggccac
ctggtggacgtcagcggcgcggggaccctgtcccagagctaccagtacgaggtgtgtctg
acggggggtactgggaccagcgagttcaagttcctcaagcccattattcccagtggtctg
tttcaggatactgagtga
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