Vulpes lagopus (Arctic fox): 121497201
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Entry
121497201 CDS
T07435
Symbol
SDC3
Name
(RefSeq) syndecan-3
KO
K16337
syndecan 3
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg04514
Cell adhesion molecules
vlg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121497201 (SDC3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121497201 (SDC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
vlg00535
]
121497201 (SDC3)
Proteoglycans [BR:
vlg00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
121497201 (SDC3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
121497201
NCBI-ProteinID:
XP_041622437
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Position
8:119134224..119168691
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AA seq
442 aa
AA seq
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MKPGPPHRAGAAHGAAAGIGAAAGHGARGLLLPPLLLLLLAGRAAGAQRWRNENFERPVD
LEGSGDDDSFPDDELDDLYSGSGSGYFEQESGIETAMRFSPDVAMAVSTTAAVLPTVDIQ
PVGTPFEELPSEHPTPEPATSPPVVTEVPEEPSQRATTISTLTAPTAATTAGALTVATVP
ATVATAVPSIPAAPPSTAITSVIRTTGIRRLLPLPLTTAATARATTPAAPSPPTTVAVLD
TEAPTPRMVSTATSRPRALPRPATTQEPDLPEKSTLPLGTTAPGPTEVAQTPTPESVLTT
IRDEPEVPVSGGPSGDFELPEEDTTQPDTANEVVAVGGAAAKPSPPPGTLPKGARPGPGL
LDNAIDSGSSAAQLPQKSILERKEVLVAVIVGGVVGALFAAFLVTLLIYRMKKKDEGSYT
LEEPKQASVTYQKPDKQEEFYA
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaagccggggccgccgcaccgcgccggggccgcccacggggcagcagcggggatcggg
gccgcggccgggcacggcgcccgcgggctgctcctgccgccgctgctgctgctgctgctg
gccggccgcgccgcgggggctcagcgctggcgcaacgagaactttgagaggcccgtggac
ctcgagggctctggggatgacgactccttccctgatgatgagctggatgacctctactca
gggtcgggctcaggctacttcgagcaggagtcgggcattgagacagccatgcggttcagc
ccggatgtggccatggcagtgtctactacagctgcagtgctgcccaccgtggacatccag
cccgtgggcaccccgtttgaagagctcccctctgagcaccccaccccggaaccagccacc
agccccccagtggtgacagaggtcccagaagagcccagtcagagagccaccaccatctcc
actctcacggctcccacagccgccacgacggcgggggccctgaccgtggccacggtgcct
gccacggtggccactgccgtccccagcatccctgcggcacccccttccacggccatcacc
tctgtcataaggaccaccggcatacggaggctcctgcctctcccattgaccacggcagcc
acggcccgggccaccaccccagcggcgccctcccctcccaccacggtggctgtcttggac
acagaggccccaacacccaggatggtcagcacagctacctccaggccgagggcccttccc
aggccggctaccacccaggagcctgacctccccgagaagagcaccttgcccttggggacc
acggcccctggccccacggaggtggctcagaccccaactccggagtccgtcctgaccacg
atccgggatgagcctgaggtgccagtgagcggggggcccagcggggactttgagctgccg
gaggaggataccacacagccagacacagccaatgaggtggtggccgtgggcggggctgca
gccaagccgtcacctccgccggggacactgcccaagggtgcacgccctggcccgggcctc
ctggacaatgccatcgactccggcagctcagctgctcagctgcctcagaaaagcatcctg
gagcggaaggaggtgctcgtagctgtgattgtaggtggggtggtgggtgccctgttcgct
gccttcctagtcacgttactcatctaccgcatgaagaagaaggatgaaggaagctacact
ctggaggagcccaagcaggcgagcgtcacgtaccagaagcccgataagcaggaggaattc
tacgcctag
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