Vulpes lagopus (Arctic fox): 121497321
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Entry
121497321 CDS
T07435
Name
(RefSeq) protocadherin beta-6-like
KO
K16494
protocadherin beta
Organism
vlg
Vulpes lagopus (Arctic fox)
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
vlg04515
]
121497321
Cell adhesion molecules [BR:
vlg04515
]
Cadherins
Protocadherins
121497321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
121497321
NCBI-ProteinID:
XP_041622735
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All DBs
Position
8:85580889..85584103
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AA seq
815 aa
AA seq
DB search
MADVVVRTGKGFFPLGSDIMEMAQTKVHRKKRQVAILIIWMLLWEAGSEPIQYSVLEESE
SGTFVANLTKDLGLRKGEMAARGAQVVFKGNRQCLQLDPQTYDLLLNEKLDREELCGSTE
PCVLPFQVLLENPLQFFQAALRVRDINDHAPEFPAREMLLKISEITTPGKLFPLKMAQDL
DAGSNSLQSYTISSNPHFHVLTRNRSDGRKFPELVLDKALDREEQPELRLTLTALDGGSP
PRSGTVEIQILVLDINDNAPEFAQELYETQIPENSSLGSLIITVSARDLDAGPFGEVSYA
LFQVDDVNQPFEIHAITGEIRLRKTLDFEEFQSYHVDIEATDGGGLSGKCSLVIKVLDVN
DNTPQLTMSSFTSAIPENLPEIIVAVFSVSDADSGQNQQVICSIDDNLPFLLRPSVENFY
TLVTNGALDRESQAEYNITITVSDLGTPRLQTQHTITVTVSDVNDNAPAFSQTTYTLRVR
ENNSPALHIGTVSATDRDAGANAQVTYSLLPPRDPQLPLASLVSINADNGQLFALRSLDY
EALQAFEVRVGAADRGSPALSSQALVRVLVLDDNDNAPFVLYPLQNGSAPCTELVPRAAE
AGYLVTKVVAVDGDSGQNAWLSFQLLKATEPGLFGVWAHNGEVRTARLLSERDAVRHRLL
VLVKDNGEPPLSASVTLHVLLVDGFSQPYLPLPDVAAAEARADPLTVYLVIALASVSSLF
LCSALAFVAVRLCRRSGAASGGGCAVPEGHFPGHLVDVSGAGTLSQSYQYEVCLTGGTGT
SEFKFLKPIIPNFVGEGAGRATEENSNFRDHFGFS
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtggtggtgaggactggaaaaggattttttcctctgggatcagacataatg
gagatggcgcaaacaaaagtacatcgcaagaaaaggcaagtggcaattctcattatatgg
atgcttttgtgggaagccggttcagaaccgattcaatattctgtactggaggagtcagaa
agtggcacgtttgtggccaatttgacaaaggacttgggactcaggaaaggagaaatggct
gcacggggtgcccaggttgttttcaaggggaacagacagtgtttgcagcttgacccacag
acctatgatttgctgctgaatgagaaactggacagggaagagctgtgcggatccactgag
ccatgtgtgctacctttccaagtgttactggaaaatcccttgcagttttttcaggctgct
ttacgagtcagagatataaatgaccacgccccggagttcccagccagagaaatgctacta
aaaatatcagaaattactacaccaggaaagctatttcctttgaaaatggcacaggattta
gatgctggtagcaacagtcttcagagctacacaatcagctccaatcctcatttccacgtt
ctcactcgcaatcgcagcgatggcaggaagttcccagagctggtgctggacaaagccttg
gaccgcgaggagcagccagagcttaggcttactcttacggctctggatggtgggtctcca
ccccggtctgggaccgtggagattcagatcctggtcttggacatcaatgacaatgccccc
gagtttgctcaggagctctatgagacacagatccctgaaaacagttccctgggctctctg
ataatcactgtctccgcgagagatttagatgcaggaccctttggggaggtatcttatgcc
ctgtttcaggtagatgacgttaatcaaccctttgaaatacacgcaattacgggagaaatt
cgactgagaaagactttggattttgaggagtttcaatcttatcatgtggatattgaggct
acagatggtgggggactatcagggaaatgctctttagtgatcaaggttctggatgtaaat
gacaacactcctcaattgaccatgtcgtcattcaccagtgccatccccgaaaacctccca
gagatcatagtggcagttttcagtgtatcagatgcagattctggacaaaatcaacaggtt
atttgttctatagatgacaatctcccctttcttctacggccatcagtcgagaatttctat
accttggtaacaaatggggcgctggacagagagagccaggcggagtacaacatcaccatc
accgtcagtgacttggggacccccaggctgcaaacccagcacaccatcaccgtgacggtc
tccgacgtcaacgacaacgcccccgccttcagccagaccacctacaccctgcgcgtccgc
gagaacaacagccccgccctgcacatcggcaccgtgagcgccaccgacagggacgcgggc
gccaacgcccaggtcacctactcgctgctgccgccccgggacccgcagctgccgctcgcc
tcgctggtgtccatcaacgcggacaacgggcagctgttcgcgctcaggtccctggattac
gaggcgctgcaggccttcgaggtccgcgtgggcgcggccgaccgcggctcgcccgcgctg
agcagccaggcgctggtgcgcgtgctggtgctggacgacaacgacaacgcgcccttcgtg
ctgtacccgctgcagaacggctctgcgccctgcaccgagctggtgccgcgggcggccgag
gcgggctacctggtgaccaaggtggtggcggtggacggcgactcgggccagaacgcctgg
ctgtcgttccagctgctcaaggccacggagcccgggctgttcggcgtgtgggcgcacaac
ggcgaggtgcgcacggcccggctgctgagcgagcgcgacgccgtcaggcacaggctgctg
gtgctggtcaaggacaatggcgagccgccgctgtcggccagcgtcacgctgcacgtgctg
ctggtggacggcttctcgcagccctacctgccgctgccggacgtggcggcggccgaggcc
cgggccgacccgctcaccgtctacctggtcatcgccttggcgtccgtgtcgtcgctcttc
ctgtgctcggcgctggcgttcgtggcggtgcggctgtgcaggaggagcggggcggcgtcg
gggggtggctgcgcggtgcccgagggccacttcccgggccacctggtggacgtcagcggc
gcggggaccctgtcccagagctaccagtacgaggtgtgtctgacgggggggactgggacc
agcgagttcaagttcctcaagcccattatccccaatttcgtgggtgaaggggctggtagg
gccaccgaggaaaactctaactttagagatcattttgggttcagttaa
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