KEGG   Vulpes lagopus (Arctic fox): 121498566
Entry
121498566         CDS       T07435                                 
Name
(RefSeq) 26S proteasome complex subunit SEM1-like
  KO
K10881  26 proteasome complex subunit DSS1
Organism
vlg  Vulpes lagopus (Arctic fox)
Pathway
vlg03050  Proteasome
vlg03440  Homologous recombination
vlg05010  Alzheimer disease
vlg05012  Parkinson disease
vlg05014  Amyotrophic lateral sclerosis
vlg05016  Huntington disease
vlg05017  Spinocerebellar ataxia
vlg05020  Prion disease
vlg05022  Pathways of neurodegeneration - multiple diseases
vlg05169  Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:vlg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    121498566
  09124 Replication and repair
   03440 Homologous recombination
    121498566
 09160 Human Diseases
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    121498566
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    121498566
   05012 Parkinson disease
    121498566
   05014 Amyotrophic lateral sclerosis
    121498566
   05016 Huntington disease
    121498566
   05017 Spinocerebellar ataxia
    121498566
   05020 Prion disease
    121498566
   05022 Pathways of neurodegeneration - multiple diseases
    121498566
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vlg03019]
    121498566
   04131 Membrane trafficking [BR:vlg04131]
    121498566
   03051 Proteasome [BR:vlg03051]
    121498566
   03400 DNA repair and recombination proteins [BR:vlg03400]
    121498566
Messenger RNA biogenesis [BR:vlg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     121498566
Membrane trafficking [BR:vlg04131]
 Exocytosis
  Tethering complex
   Exocyst complex assembly proteins
    121498566
Proteasome [BR:vlg03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    non-ATPase subunits
     121498566
DNA repair and recombination proteins [BR:vlg03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     121498566
SSDB
Motif
Pfam: DSS1_SEM1
Other DBs
NCBI-GeneID: 121498566
NCBI-ProteinID: XP_041624514
LinkDB
Position
9:complement(16770019..16777280)
AA seq 111 aa
MRMLDWQALEPKKRHLSHLFEANPSRLNMHLESSESFYILYVLSKALSQAPHLSQSYDEF
KEFPAEDWAGLDEDEDAHVWEDNWDDDNVEDDFSNQLRAELEKHGYKMETS
NT seq 336 nt   +upstreamnt  +downstreamnt
atgcgtatgctcgactggcaagcattggagccaaaaaagcgacatctgtcacatttgttt
gaagccaatccaagtagactgaacatgcatttagagagctccgaaagcttttatatcttg
tacgtgctgtcaaaggcactgagtcaggccccacacctgagccaatcatatgacgagttc
aaggagttccctgccgaagactgggctggtttagatgaagatgaagatgcacatgtctgg
gaggataattgggatgatgacaatgtagaggatgacttctccaatcagttacgagctgaa
ctagagaaacatggttataagatggagacctcatag

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