Vulpes lagopus (Arctic fox): 121499042
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Entry
121499042 CDS
T07435
Symbol
CDH17
Name
(RefSeq) cadherin-17
KO
K06811
cadherin 17, LI cadherin
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09160 Human Diseases
09162 Cancer: specific types
05226 Gastric cancer
121499042 (CDH17)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
vlg04515
]
121499042 (CDH17)
Cell adhesion molecules [BR:
vlg04515
]
Cadherins
Major cadherins
121499042 (CDH17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_4
Cadherin_CELSR2_9th
RibLong
LlgE_F_G_D1
SKG6
ECD
Arm-DNA-bind_1
Motif
Other DBs
NCBI-GeneID:
121499042
NCBI-ProteinID:
XP_041625441
LinkDB
All DBs
Position
9:41328246..41399137
Genome browser
AA seq
831 aa
AA seq
DB search
MMQAQLSCLCLLTLHLATGYSHEGKFSGPLQPMTFSVFEGQQGSQVIFQFKASPPAMTFK
LTGETDGIFQIQPDGLLYHNGALDRETRAVHKLQVSALNAQGATVQGPVPITIEVKDIND
NRPTFLQLKYEGSVRQNSRPGKPFMYVNATDLDDPATPNGQLVYEIVIQLPKINNVMYFQ
INNKTGGISLTRDGALELDPTKNSNYNLVVSVKDMGGQNENSFSDSTSVDIMVKENIWKA
PELLEIVENSTDPHPLKITQVQWNEPGAKYSLVDKEKLPRFPFTIDQEGSIYVTQPLDRE
EKDSYVFYAVAKDENGELLSIPLQIRVKVKDINDNPPTCPSAVTVFEVQENEIIGSNIGT
LIAHDRDEENTASTVLAYKIVDQIPAFPKEGLFLVQTYTGVFQLAKQSLKKQDTPQYNLT
VQVSDKDFNTLCQVEIHVIDINDQIPIFEKSDYGNLTLAEDTAVGSTILTIQATDADEPL
TGSSKILYRITQGDSEGRLGIDTDPQTNAGYVIIKKPLDFETVAVHNLVFQAENPEPLVH
GVNYNSSSSATFKLIVTNVNEAPQFTQNIYQAKVREDVAIGTKVGNVTAKDPENLDISYS
LKNNKRGWLRIDPVTGEIFTMAPMDREAESVYRVQVVATEVGGSSLSSVATFHLALSDVN
DNPPRLATDHPHLFLCHPLQAPGSVIFEATDDDQQSFRGPRFTFSLGSKVLENDWEVKRI
NGSHAKLSTKHTNFEERVYSVPIHISDGGEPELKGTVSLPVTFCKCVEGSCFRPAGHQSG
MPTVGMAVGILLTTFLVIGIILAVVFIRIKKNEGKDNVEIAQACEAQPLRN
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaagcccaactgagttgcttgtgtctccttacacttcatttggcaactggatat
agccacgaggggaagtttagtggacccctgcagcctatgacattttctgttttcgaaggc
caacaagggagtcaagtcatattccagtttaaggccagtcctcctgctatgactttcaaa
ctaactggagagacagatggcatatttcagatacaaccagatggacttctgtatcataac
ggagccctggatagagaaacaagagctgttcacaaactccaggtctcagccttgaacgct
caaggagctacggtgcagggcccagttcccatcaccatagaagtgaaagacatcaatgac
aatcgacccacatttctccagctaaagtatgaaggctcagtaagacagaactctcggcca
ggaaagcccttcatgtatgtcaatgctacagacctggatgatccagccacacccaatggt
cagcttgtttatgaaattgtcatccagctccccaagatcaacaacgtcatgtactttcag
atcaacaacaaaacggggggaatttcacttacccgtgatggagctctggaattggatccc
actaagaattctaactacaatctggtggtctcagtgaaggacatgggaggccagaatgag
aattctttcagtgacagcacatctgtggatattatggtgaaggagaatatttggaaagca
ccagaactattggagattgtagaaaactcaactgatcctcaccccctcaaaatcactcag
gtgcagtggaatgagccaggtgcgaaatactccttggttgacaaggagaagctgccaaga
ttcccatttacaattgaccaggaaggaagtatttatgtgactcagcccttggaccgagaa
gaaaaggattcgtatgttttttatgctgtggcaaaggatgagaatggagaactgctttca
atcccactgcaaattcgtgtgaaagttaaagacattaatgataatccacctacgtgtccc
tctgccgtgactgtatttgaggtccaggagaatgaaatcatagggagcaacattgggact
cttattgcccatgacagggatgaagaaaacactgccagcacggttttagcatacaaaatt
gtggatcaaatccctgcatttcccaaggaaggactcttcctggtccaaacctacacagga
gtgttccagttggctaagcagtccttgaagaagcaagacactccacaatacaacctgaca
gtacaggtgtctgacaaagacttcaacaccctgtgtcaggtggagatccacgttattgat
atcaatgatcagatccccatatttgaaaaatcagactatggaaacctaactcttgctgaa
gacacagcggttgggtccaccatcttaaccatccaggccacagatgctgatgagccactc
accgggagttctaaaatcctgtatcgtatcacacagggagacagtgagggacggctgggg
attgacacggatccccaaaccaacgctggatatgtcataattaaaaagcctcttgatttc
gaaacagtagccgttcataatcttgtgttccaagcggaaaatcctgagcctctggtgcat
ggtgtaaattataacagcagctcttctgctacattcaagcttattgtgaccaatgttaat
gaagcaccccaatttacccagaacatataccaagcaaaagtccgagaagatgtggctata
ggcactaaagtgggcaacgtgactgccaaggatccggaaaatctggatataagttattcc
ctgaaaaacaacaagagaggttggcttagaattgaccccgtcactggcgagatctttact
atggctccgatggacagggaagccgaaagtgtgtatcgggtacaagtggtggcaactgaa
gtaggtggctcctccctgagctccgtagccactttccacctggccctgtccgatgtgaac
gataacccccctcggctagccacggaccacccacacttgtttctatgccaccccctccaa
gcacctggaagtgtcattttcgaggccactgatgacgatcagcagtcttttcggggtcca
cggtttacattttctcttggcagcaaagtcttagaaaacgactgggaagttaagcgaatc
aatggatctcatgccaaactctccaccaagcacacgaactttgaggagagagtttacagc
gtcccaatccacatcagtgatggcggtgaaccagaattgaagggaacagtctcgttacca
gttactttctgcaagtgtgtggaaggaagttgtttccggccagccggtcaccagtctggg
atgcccactgtgggcatggcagttggtatacttttgaccacctttttggttattggtata
attttagcagttgtgtttatccgaataaagaagaatgaaggcaaagataatgtcgaaatt
gctcaggcatgtgaagcccagcctctgagaaactga
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