Vulpes lagopus (Arctic fox): 121499275
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Entry
121499275 CDS
T07435
Symbol
CDKAL1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
vlg
Vulpes lagopus (Arctic fox)
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vlg03016
]
121499275 (CDKAL1)
Enzymes [BR:
vlg01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
121499275 (CDKAL1)
Transfer RNA biogenesis [BR:
vlg03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
121499275 (CDKAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-GeneID:
121499275
NCBI-ProteinID:
XP_041625709
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All DBs
Position
10:complement(6344441..6991736)
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AA seq
578 aa
AA seq
DB search
MPSASCDTLLDDIEDIVSQGDLKPQDRHSARKHVVPKARKRNTQKYLQEENSPPSDSTIP
GIQKIWMRTWGCSHNNSDGEYMAGQLAAYGYEITENASEADLWLLNSCTVKNPAEDHFRN
SIKKAQEENKKIVLAGCVPQAQPRQDYFKGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQ
KKANGKRLGGARLDLPKIRKNPLIEIISVNTGCLNACTYCKTKHARGNLASYPIDELVER
AKQSFQEGVCEIWLTSEDTGAYGRDIGTNLPALLWKLVEVIPEGAMLRLGMTNPPYILEH
LEEMAKILNHPRVYAFLHIPVQSASDTVLMEMKREYCVADFKRVVDFLKEKVPGITLATD
IICGFPGETDQDFQETVKLVEDYKFPSLFINQFYPRPGTPAAKMVQVPAQVKKQRTKDLS
RVFHSYNPYDHKIGERQQVLVTEESFDSKFYVAHNRFYEQVLVPKNPTFMGKMIEVDIYE
SGKHFMKGQPVSDAKVYTPSISKPLAKGEVSGLTEGFRNGPRSHLSSARHPSAAVRRDSA
SSRLVLHLQKLHQDCALRVSVGLALFALLLAFLVKVYN
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgcatcctgtgacacactattggacgacatagaagatattgtgtcacaggga
gatttaaagccacaagataggcattccgcacgaaagcacgttgttccaaaggcacgaaaa
cgaaatacccaaaagtatttgcaagaggaaaacagtccaccaagcgatagcaccattcca
ggcatacagaaaatttggatgcgaacatggggttgttctcataataattcagatggagaa
tatatggctggacaactagctgcttatggatatgaaattacagaaaatgcatcagaggca
gatttatggctcctgaatagttgtactgtaaaaaatcctgctgaagaccactttagaaac
tcaattaaaaaagctcaagaggagaacaagaaaatagtgctagctggatgtgttcctcaa
gcccagcctcggcaggactactttaagggactgagtatcataggggttcaacagatagat
cgagtggtagaagttgtggaggaaacaattaaaggtcattccgtgaggctgctgggtcag
aaaaaggctaatgggaagcggctgggtggagcacggttggatctgccaaagattaggaaa
aatccactgatagaaatcatttccgtcaatactgggtgtctcaatgcatgtacctactgc
aaaactaaacatgccagaggaaatttggccagttacccaattgatgaactagtggaaaga
gccaaacagtcttttcaagagggtgtttgtgagatatggttgaccagtgaagacacaggg
gcttatggcagagacattggcaccaatctccctgcactgctgtggaaactggttgaagtg
attcctgagggagcaatgctaaggcttggcatgacaaatccaccctatattttagagcat
ctggaggaaatggcaaaaatccttaatcatcccagagtctatgcttttctgcacatacca
gtccaatctgcctctgacaccgtactcatggaaatgaaaagagaatactgcgtggctgac
ttcaaaagagtagtggattttctgaaagagaaagttcccggaataacccttgctacagat
attatctgtggttttcctggagaaacagatcaagattttcaagaaacagtgaaacttgtg
gaagactacaaatttccaagcctctttattaaccagttttatcccagaccaggaactcct
gcagcgaaaatggtacaagttccagcacaagtgaaaaagcaaagaacaaaagatctttct
cgggtattccattcttacaatccatatgatcacaagattggcgaaaggcaacaagtgtta
gtgacagaagaatctttcgattccaagttttatgtggcacacaatcgattctatgagcag
gttttagtgccaaagaaccccacattcatggggaaaatgatcgaagtggacatttacgaa
tccggcaaacattttatgaaagggcagccagtatcagacgccaaagtatacacgccatcc
atcagcaaaccattagcaaagggagaagtctcaggtttaacagagggcttcagaaacggg
ccgaggagtcacctgagctcggctcgccacccttctgctgcggtgcggcgggactctgct
agctccagactggtgctccacttgcagaaactccatcaagactgtgcactgagggtgtct
gtgggcctggctctatttgctcttcttctggcttttttggtcaaagtctataattaa
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