Vulpes lagopus (Arctic fox): 121499378
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Entry
121499378 CDS
T07435
Symbol
CTCF
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
vlg
Vulpes lagopus (Arctic fox)
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vlg03000
]
121499378 (CTCF)
03036 Chromosome and associated proteins [BR:
vlg03036
]
121499378 (CTCF)
Transcription factors [BR:
vlg03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
121499378 (CTCF)
Chromosome and associated proteins [BR:
vlg03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
121499378 (CTCF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
Zf-C2H2_ZNF451_C
zf-C2H2_ZN142
zf-C2H2_7th_ZNF462
zf-met
zf-C2HE
zf-C2H2_6
Zf-C2H2_ZNF451
zf-C2H2_15
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
121499378
NCBI-ProteinID:
XP_041625860
LinkDB
All DBs
Position
10:complement(108645271..108700401)
Genome browser
AA seq
727 aa
AA seq
DB search
MEGEAVEAIVEESETFIKGKERKTYQRRREGGQEEDTCHLPQNQTDGGEVVQDVNSSVQM
VMMEQLDPTLLQMKTEVMEGTVAPEAEAAVDDTQIITLQVVNMEEQPINIGELQLVQVPV
PVTVPVATTSVEELQGAYENEVSKEGLAESEPMICHTLPLPEGFQVVKVGANGEVETLEQ
GELPPQEDPSWQKDPDYQPPAKKTKKTKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSEV
NAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCG
RAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYAS
VEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSG
TMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERY
ALIQHQKSHKNEKRFKCDQCDYACRQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLLDM
HFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENGGETKKSKRGRKR
KMRSKKEDSSDSENAEPDLDDNEDEEEPAVEIEPEPEPQPVTPAPPPAKKRRGRPPGRTN
QPKQNQPTAIIQVEDQNTGAIENIIVEVKKEPDAEPVEGEEEEAQPAATDAPNGDLTPEM
ILSMMDR
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgaggcggttgaagccattgtggaagagtctgaaactttcattaaaggaaag
gaaagaaagacttatcagagacgccgggaagggggccaggaagaggatacttgccaccta
ccccagaaccagactgatgggggtgaggtggtccaggatgtcaatagcagtgtacagatg
gtaatgatggaacaactggatcctacccttcttcagatgaagactgaagtaatggagggt
acagtcgctccagaagcagaggctgctgtggacgatacccagatcataaccttgcaggtt
gtaaatatggaagaacagcctataaacataggagagcttcagcttgtccaagtacctgtt
cctgtgactgtacctgttgctaccacttcagttgaagaacttcagggggcttatgagaat
gaagtatctaaagagggccttgcagaaagcgaacccatgatatgtcacaccttacctttg
cctgaagggtttcaagtggtgaaagtaggtgccaatggagaggtggagacgctagagcaa
ggggaacttccacctcaagaagatcctagttggcaaaaagacccagattatcagccacca
gccaaaaaaacaaagaaaaccaaaaagagcaaactgcgttacacagaggaaggcaaagat
gtggatgtgtctgtctatgattttgaggaagagcagcaggagggcctgctgtcagaggtt
aatgcagagaaagtagttggtaacatgaagcctccaaaaccaacaaaaattaaaaagaaa
ggtgtaaagaagacattccagtgtgagctttgcagttatacgtgtccacggcgttcaaat
ttggatcgtcacatgaaaagtcacactgatgagagaccacacaagtgccatctctgtggc
agggcattcagaacagtcaccctcttgaggaatcaccttaacacacacacaggtacccgt
cctcacaagtgcccagattgtgacatggcctttgtgactagtggagaattggtgcggcat
cgtcgttataaacacacccatgagaagccatttaagtgttccatgtgcgattacgccagc
gtagaagtcagcaaattaaaacgtcacatccgttctcatactggagagcgtccgttccag
tgcagcttgtgcagttacgccagcagggacacatacaagctgaaaaggcacatgagaacc
cattcaggggaaaaaccttatgaatgttatatttgtcatgctcggtttacccaaagtggt
accatgaagatgcacattttacagaagcacacagaaaatgtggccaaatttcactgtccc
cactgtgacactgtcatagcccgaaaaagtgatttgggtgtccacttgagaaagcagcat
tcctatattgagcaaggcaagaaatgtcgatactgcgatgctgtgtttcatgagcgctat
gccctcatccagcatcagaagtcacacaagaacgagaagcgctttaagtgtgaccagtgt
gattatgcttgcagacaggagaggcacatgatcatgcataagcgtacacacaccggggag
aagccttatgcctgcagccactgcgacaagaccttccgccagaaacagctcctcgacatg
cacttcaaacgctatcatgaccccaactttgtccctgcggcctttgtctgttctaagtgt
ggaaaaacatttacacgccggaataccatggcaagacatgctgacaattgcgctggtcca
gatggcgtagaaggggaaaatggtggggagacaaagaagagtaaacgtggcagaaaaaga
aagatgcgttccaaaaaagaagactcctctgacagtgaaaatgctgagccagacctggat
gacaatgaggacgaggaagaacctgctgtggaaattgaacccgagccagagcctcagcct
gtgaccccagccccaccacctgccaagaagcggagaggacgccctcctggcagaaccaac
cagcccaaacagaaccagccaacagccatcatccaagtggaagatcagaatacaggtgca
attgagaacattatagttgaagtcaaaaaagagccagatgcagagcccgtagagggggag
gaagaggaggctcaaccagctgccacagacgcccccaacggagacctcacgcccgagatg
atcctcagcatgatggaccggtga
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integrated database retrieval system
