Vulpes lagopus (Arctic fox): 121499679
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Entry
121499679 CDS
T07435
Symbol
CLSTN1
Name
(RefSeq) calsyntenin-1 isoform X1
KO
K22659
calsyntenin 1
Organism
vlg
Vulpes lagopus (Arctic fox)
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
vlg04515
]
121499679 (CLSTN1)
Cell adhesion molecules [BR:
vlg04515
]
Cadherins
Cadherin related
121499679 (CLSTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
CDC45
Laminin_G_2
FAM176
Toxin_R_bind_N
EphA2_TM
V_ATPase_I
PFF1_TM
Cadherin_C_2
SID-1_RNA_chan
TMEM132_C
Motif
Other DBs
NCBI-GeneID:
121499679
NCBI-ProteinID:
XP_041626565
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All DBs
Position
10:complement(89443318..89524858)
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AA seq
971 aa
AA seq
DB search
MLRRPAPALAPAAWLLLAGLLSGGVVWAARVNKHKPWLEPTYHGIITENDNAVLLDPPLI
ALDKDAPLRFAGEICGFKIHGQNVPFDAVVVDKSTGEGIIRSKEKLDCELQKDYTFTIQA
YDCGKGPDGTSVKKSHKATVHIQVNDVNEYAPVFKEKSYKATVIEGKQYDSILRVEAVDA
DCSPQFSQICSYEIVTPDVPFAIDKDGYIKNTEKLNYGKEHQYKLTVTAYDCGKRRAAED
VLVKVSIKPTCSPGWQGWNNRIEYEPGTGTLALFPNVHLETCDESVASVQATVELETGHI
GKGCDRDTYSEKSLHQLCGAASGTAELLPSPSGSSNWTVGLPTDNGHDSDQVFEFNGTQA
VRVPDGIVSVNPKEPFTISVWMRHGPFGRKKETILCSSDKTDMNRHHYSLYVHGCRLIFL
LRQDPSEEKKYKPAEFHWKLNQVCDEEWHHYVLNVEFPSVILYVDGVSHEPFSVTEDYPL
HPSKIETQLVVGACWQEYPAFENDNETEPVPMASAGGDLHMTQFFRGNLAGLTIRSGKLA
DKKVIDCLYTCKEGLDLQVPEDSSRGVKIHTNPSQLALTLEGDDVGELDKAMQHVAYLNS
RQFPTPGIRRLKITSTVKCFNEAACISVPPVDGYVMVLQPEEPKISLSGVHHFARAASEF
ESPEGVFLFPELRIISTITREVEPEGEGDEDPTVQESLVSEEIVHDLDTCEVTVDGEELN
PAQESLEVDMARLQQKGIAVSGSDLGMVFTGVDTMASYEEVLRLLRYRNWHTRSLLDRKF
KLVCSELNGRYVSNEFQVEVNVIHAASPMEHASHMAAQPQFVHPEHHAFVDLSGHNLASP
NPFAVVPSTATVVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQDTGKENEMDWDDSALTI
TVNPMETYEDQHSSEEEEEEEEEEESEDGEEEDDITSAESESSEEEEGEHGDQQNVNRQQ
QLEWDDSTLSY
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgccgccctgcacccgcgctggccccggccgcctggctgctgctggccgggctg
ctgagcggcggcgtggtctgggccgcgcgagttaacaagcacaaaccatggcttgagccc
acctatcatggcataatcacagaaaatgataatgcagtgctcctcgaccctcctctgatt
gccctggataaagacgcacctctgcgattcgcaggtgagatttgtggatttaaaattcat
gggcagaatgtcccctttgatgcagtggtagtggataagtccactggtgagggaataatt
cgctcaaaagagaaactggactgtgagctgcagaaagactacacattcaccatccaggcc
tatgactgcggcaaggggccggatggcaccagcgtgaaaaagtctcataaagcaactgtc
catattcaggtgaatgatgtgaatgaatatgcgccagtgttcaaggagaagtcctacaag
gcgaccgtcatcgagggcaagcagtacgacagcatcctgagggtggaggccgtggacgcg
gattgctcccctcagttcagccagatttgcagctatgaaatcgtcactccagatgtgcca
ttcgccatcgacaaagatggttatataaaaaacacagagaagctaaactacgggaaggag
caccagtataagctgacagtcactgcctatgactgtgggaagcgaagagcagcagaagat
gtgctggtgaaggtcagcatcaagcccacctgcagccccgggtggcaaggatggaacaat
aggatcgagtatgagcctggcacaggcactttggccctcttcccaaatgtccacctggaa
acgtgtgatgaatctgtggcttcggtgcaggcaacggtggagctggagactggccacatc
gggaaaggctgtgaccgtgacacctactcagagaagtcccttcaccagctatgtggtgct
gcgtctggcactgccgaactgctcccttccccaagtgggtcttcgaactggaccgtcggc
ctccccactgacaacggccatgacagtgaccaggtcttcgagttcaatggcacgcaggca
gtgagggtcccagatggcattgtctcagtcaacccgaaggaaccttttacgatttctgtg
tggatgaggcacgggccttttggcaggaagaaggagacgattctttgtagttcggacaaa
acagacatgaaccggcaccattattctctctatgtccatggctgccggctgattttcctc
ctccgtcaggatccttcggaagagaagaagtataaacctgcggaattccactggaagttg
aatcaggtctgtgatgaggagtggcaccactacgtcctcaatgtagaattcccaagcgtg
attctctatgtggacggtgtttctcacgagcccttctctgtcaccgaggattacccactt
catccatccaagatcgaaactcagctcgtggttggggcctgctggcaagagtatccagca
tttgaaaatgacaatgaaaccgaacctgtgcctatggcctctgcaggtggtgacctgcac
atgacccagtttttccgaggtaatctggctggcctaaccatccgttctgggaaactcgcg
gacaagaaggtgattgactgtctgtatacctgcaaagaagggctggacctgcaagtcccc
gaggacagcagtagaggcgtgaagatccataccaaccccagtcagttggcattgaccttg
gagggagacgatgttggggagctggataaggccatgcagcacgtcgcctatctgaactca
cggcaattccccacacctgggatccgaagactcaaaatcaccagcacggtcaagtgtttt
aacgaggccgcctgcatctccgtgcccccagtggatggctacgtgatggtgttgcagcca
gaggagcccaagatcagcctgagtggggtccaccattttgctcgagcggcttctgagttt
gaaagcccagaaggagttttccttttccccgagcttcggatcattagcaccatcacaaga
gaagtggagcctgaaggggaaggggacgaggaccccacagttcaagagtcgctggtgtct
gaggagatagtgcacgacctggatacatgcgaggtcacggtggacggggaggaactgaac
ccagcccaggagagcctggaggtggacatggcccgcctgcagcagaagggcattgcagtg
agcggctccgacctgggcatggtctttacaggtgtggacaccatggccagctacgaggag
gttctacgcctcctgcgctatcggaactggcacaccaggtctctgcttgaccggaagttc
aagctcgtctgctcagagctgaatggccgctatgtcagcaatgagtttcaggtggaggtg
aatgtcatccacgcagccagccccatggagcacgccagccacatggctgcccagccgcag
tttgtccacccggagcaccatgccttcgttgacctctcgggtcacaacctggccagcccc
aacccgttcgcagttgtccccagcaccgccactgttgtgatcgtggtatgtgtcagcttc
ctggttttcatgattatcctgggagtgttccggatccgggctgcacatcagcgaaccatg
cgggaccaggacaccgggaaggagaatgagatggattgggatgactctgccttgaccatc
accgtaaaccctatggagacatacgaggaccagcacagcagtgaggaggaggaagaggag
gaggaggaagaagagagtgaggatggggaagaggaggatgacatcaccagtgccgagtca
gaaagcagcgaggaggaggagggggagcacggggaccagcagaacgtgaacaggcagcaa
cagctagagtgggatgactccaccctcagctactga
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