Vulpes lagopus (Arctic fox): 121499718
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Entry
121499718 CDS
T07435
Symbol
TRERF1
Name
(RefSeq) transcriptional-regulating factor 1 isoform X1
KO
K26583
transcriptional-regulating factor 1
Organism
vlg
Vulpes lagopus (Arctic fox)
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vlg03036
]
121499718 (TRERF1)
Chromosome and associated proteins [BR:
vlg03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
MiDAC complex
121499718 (TRERF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_6
ELM2
zf-C2H2_4
zf-C2H2
Myb_DNA-binding
zf-C2H2_2
Myb_DNA-bind_7
zf-met
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
121499718
NCBI-ProteinID:
XP_041626662
LinkDB
All DBs
Position
1:62072069..62282057
Genome browser
AA seq
1262 aa
AA seq
DB search
MGDQQLYKTNHVAHSGENLFYQQPPLGIHGGLNHNYGNTVTGAGMDAPQASPISPHFPQD
TRDGLGLPVGSKNVGQVDPSRQGGWGGHTGPGNHVQLRSNLTNSNMVWGTPAQAEPADGY
QYTYSQASEIRTQKLTSGVLHKLDSFTQVFANQNLRIQVNNMAQVLHTQSAVMDGAPDSA
LRQLLSQKPMEPPAPALPARYQQVPQQAHPGFPSGLSKPTLQVGPHASQGHLYYDYQQPL
AQMPVQGGQPLQAPQVLSQHMQQMQQHQYYPPPQQQQQQAGQQHMSLQEMQQQQQIRPPQ
PQQQQQQQLQLQQRQGPMQIPQYYQSQPMMQHLQEQQQQQQQQMHLQPPSYHRDPHQYAP
EQAHAVQLIQLGSMPQYYYQEPQQPYGHPLCQQSHLPQHQQREDSQPKTYPSDRQAQTML
SSHGDLGPPDAGMGDPASSDLNRLAGALPHRPLLSPSGIHLNNMGPQHQQLSPSALWPQM
HLPDGRAQPGSPESSSQPKGVFGEQFDAKNKLTCSICLKEFKSLPALNGHMRSHGGMRAS
PSLKQEEGEKALPPQPQPQPQPPLPPPPPPPPQLPPEAESLTPMVMPVSIPVKLLPPKPG
SQGFANSIVAAPSARDKPASSMSDDEMPVLVRMTLSPPHSPQGAAPHPPAVSCCSAPRPP
GEIPRKHQPGAAKAEEPLKSLPEKKKFRHRPEPLFIPPPPSYTASPAASASGATLYQSQL
RSPRVLGDHLLLDPAHELPPYTPPPMLSPVRQGSGLFSNVLIAGHGPGAHPQLPLTPLTP
TPRVLLCRSNSIDGSNVTVTPGPGEQTIDVEPRINIGLRFQAEIPELQDVSALAQDTHKA
TLVWKPWPELENHDLQQRVENLLNLCCSSALPGGGTNSEFALHSLFEAKGDVMAALEMLL
LRKPVRLKCHPLANYHYAGSDKWTSLERKLFNKALATYSKDFIFVQKMVKSKTVAQCVEY
YYTWKKIMRLGRKHRTRLAEIDDSVVSEAAQSLLMRAPLPPHTQTSEEEEELEEEEEDPE
EDRKSTREEESEVPKSPEPPPGPVLAPAEGPPLQALGQPSGSFICEMPNCGADCRCHVTP
FLPQVFSSRQALNGHARIHGGTNQVTKARGAIPSGKQKPGNAQSGYCSVKSSPSHSTTSG
ETDPTTIFPCKECGKVFFKIKSRNAHMKTHRQQEEQQRQKAQKAAFAAEMAATIERTTGP
TGAPGLLPLDQLSLIKPIKDVDILDGDVVQQLGGVMEEAEVVDTDLLLDEQDSVLLQGDA
EL
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgggggatcagcagctgtacaagaccaatcacgtggcccacagtggtgagaaccttttc
taccaacagccaccgcttggcatccatggtgggctgaaccacaactatgggaatacggtc
acaggggctggaatggatgccccgcaggcgtcacccatctccccccacttccctcaagat
actcgggatggtctaggcttgcctgttggttccaaaaacgttggccaagtggatccctca
aggcagggagggtggggaggtcatactgggcctggaaaccacgtccagctacgcagcaac
ctgaccaactctaacatggtgtgggggacaccggcccaggctgagcccgccgatggctac
caatatacctactcccaggccagcgagatccggacccagaaactcaccagcggtgtcctg
cacaagctagactccttcacccaggtgttcgccaaccaaaacctgcgaattcaggtcaac
aatatggcccaggtgctgcacacccagtcagcagtgatggacggagccccagacagcgcc
ctccgacagctgctgtcccagaagcccatggagcccccagcgccggctcttcctgctcgc
taccagcaggtgccccagcaggctcaccctggtttccccagtgggctgtccaaaccaact
cttcaggtggggccacacgctagccagggccacctgtattatgactaccagcagccactg
gctcagatgccagtgcagggaggacagccactgcaagcccctcaggtgctgtcccagcac
atgcagcagatgcagcagcaccagtattacccgccgccacagcagcaacagcagcaggcc
gggcagcagcatatgtccctgcaggaaatgcagcagcagcagcagatccgcccgccacag
cctcagcagcagcagcaacagcagctgcagctgcagcagcggcagggtccgatgcagata
cctcagtattaccagtcccaacccatgatgcagcacttgcaagaacagcagcagcagcaa
cagcagcaaatgcacctacagcccccttcgtatcacagggacccccaccagtatgccccg
gagcaggcgcatgccgtccagctgatccagctgggctccatgccccagtactactaccag
gagccccagcagccctacggccaccccctctgccagcagagccacctgccccagcaccag
caacgcgaggacagtcagcccaagacttacccaagcgacaggcaggcccagaccatgctg
agctcccacggcgacctggggcctcccgatgcaggaatgggagatccggcaagctcggac
ctgaaccggctcgccggggctctcccccatcggccgctcctatcccccagcgggatccac
ctcaacaacatggggcctcagcaccagcagctgtctcccagtgccctgtggccccagatg
cacctacctgatggcagagcccagccagggtcccccgagtcaagtagccaaccaaaagga
gtgtttggggagcagtttgatgccaagaacaaactgacgtgctccatctgcctgaaggaa
ttcaagagcctgcctgccctgaatggccacatgcggtcccatgggggaatgagagcctcc
cccagtctcaaacaggaggaaggagagaaggccctgccgcctcagcctcagcctcagccc
cagccgccactgccacctccgcctccgccgccaccgcagctccctcccgaggcagaaagc
ctcacgcccatggtcatgcccgtgtctatccctgtcaagcttctcccgcccaagccaggc
tctcagggcttcgccaacagcatcgttgccgccccctccgccagagacaagccagccagc
tcgatgtcggacgacgagatgcccgtgctcgtgaggatgaccctctctcccccacactca
ccccaaggggctgccccccacccgcctgctgtgagttgctgctctgccccccgcccgcct
ggggagattcccaggaagcaccagccgggcgcggccaaagccgaggagcccctcaagagc
ttgcccgagaagaagaagttccggcaccggcccgagccgctcttcatcccgcccccgccc
tcctacaccgccagccccgccgcctcggcctcgggcgccacgctgtatcagagccagctg
cgctccccgcgcgtgctcggggaccacctgctgctggaccccgcccacgagctgcccccc
tacacgcccccgcccatgctgagcccggtgcgccagggctcggggctcttcagcaacgtc
ctcatcgcggggcacggccccggcgcccacccgcagctgcccctcacgcccctgacgccc
acgccgcgggtgctgctgtgccgctccaacagcattgatggcagcaacgtgacagtcacc
ccggggcctggagagcagaccattgatgttgaaccacgcatcaacattggcttgaggttc
caagcagagatcccagaacttcaggatgtctctgccttggcccaggacacacacaaggcc
acactggtttggaagccctggccagaactagaaaaccatgacctccagcaaagagtggag
aacctcctgaacttgtgctgttcaagtgcattgcctggtggagggaccaattctgaattt
gctttgcactctctcttcgaggccaaaggtgatgtgatggctgctctggaaatgctgctg
ctgcggaagccagtcaggttaaaatgtcatcctttagcaaattaccactatgccggttcg
gacaagtggacctccctcgaaagaaaactgtttaataaagcactagccacttacagcaaa
gactttatttttgtacagaagatggtgaagtctaagacagtggctcagtgtgtggagtac
tactacacgtggaaaaagataatgcgcttggggcggaaacatcggacacgcctcgcagaa
atcgatgattctgtggtgagtgaagctgctcagtcgctgcttatgcgggccccgctcccg
ccccacacccagacaagtgaagaagaggaagagttagaggaggaggaggaggacccagag
gaagataggaaatccacaagagaagaggagagtgaagtgcccaagtctcctgagccacca
ccaggccctgtgctagctcccgcggaggggccgcccctgcaggccctcggccagccctct
ggctccttcatctgtgagatgcccaactgtggcgctgactgtagatgtcatgtcactccc
tttcttccccaggtgttcagctcccgacaggcactgaatggccatgcccgcatccatggt
ggcaccaaccaggtgaccaaagcccggggtgccatcccctctgggaagcagaagccaggc
aacgcccagagtgggtactgctcagtgaagagctcaccctctcacagcaccaccagtggc
gagacagaccccactaccatcttcccctgcaaggagtgtggcaaagtcttcttcaagatc
aaaagccgaaacgcccacatgaaaacgcacaggcagcaggaggaacagcagaggcaaaag
gctcagaaggcagcttttgccgctgaaatggccgccaccattgagaggactacggggccc
acgggggcgccagggctgctgcctctggaccagctgagcctgatcaaacccatcaaggac
gtggacatcctcgatggcgacgttgtccagcagctgggaggcgtcatggaagaggccgag
gtcgtggacacggatctcctcttggatgagcaagattcggttttgcttcaaggggacgcg
gaactataa
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