Vulpes lagopus (Arctic fox): 121500261
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Entry
121500261 CDS
T07435
Symbol
SF3B3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121500261 (SF3B3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vlg03021
]
121500261 (SF3B3)
03041 Spliceosome [BR:
vlg03041
]
121500261 (SF3B3)
03036 Chromosome and associated proteins [BR:
vlg03036
]
121500261 (SF3B3)
Transcription machinery [BR:
vlg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
121500261 (SF3B3)
Spliceosome [BR:
vlg03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
121500261 (SF3B3)
Complex B
121500261 (SF3B3)
Complex C
U2 SnRNP specific factors
121500261 (SF3B3)
Chromosome and associated proteins [BR:
vlg03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
121500261 (SF3B3)
TFTC complex
121500261 (SF3B3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
121500261
NCBI-ProteinID:
XP_041627760
LinkDB
All DBs
Position
10:103332838..103385525
Genome browser
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG
DDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtttctatacaacttgaccttgcagcgagccacaggcatcagctttgccattcatggc
aacttttctggaaccaaacaacaggaaattgttgtttcccgtgggaagatactggagctg
cttcgccctgaccccaacactggcaaagtacatactctgctaactgtggaagtatttggt
gttatcagatcactcatggcctttaggctaacgggtggcaccaaagactacattgtggtt
ggcagtgactcaggtcggatagttatcctggaataccagccatccaagaatatgtttgag
aaaattcaccaagaaacgtttggcaagagcggatgccgccgcattgttcctggacagttc
ttagctgtggatcccaaagggcgagctgttatgattagtgccattgaaaaacagaaattg
gtatatatcttgaacagagatgctgcagcccggcttaccatttcatcccctctagaggcc
cacaaagcgaacactttagtatatcatgtggtcggagtagatgtgggatttgaaaatcca
atgtttgcttgtctggaaatggattatgaggaagcagacaatgatccaacaggggaagca
gcagctaatacccagcagacgcttaccttctatgagttagaccttggtttaaatcatgtg
gtccgaaagtacagtgaacctttggaggaacatggcaactttcttattacagttcctgga
gggtcagatggtccaagtggagtgctaatctgctctgaaaactatatcacctacaagaac
tttggtgaccaaccggatatccgctgtccaattcccaggagacggaatgacctggatgac
cctgaaagaggaatgatttttgtttgctctgccacccataagaccaaatcaatgttcttc
tttttggcccaaactgagcagggagatattttcaagatcactttggagacagatgaagat
atggttactgagatccggctcaagtactttgatactgtgcctgttgctgctgccatgtgt
gtgcttaaaacaggcttcctttttgtagcatcagaatttggaaaccattacttgtatcaa
atagcacatcttggagatgacgacgaagaacccgaattttcgtctgccatgcctctggaa
gaaggagacacatttttcttccagccacgaccactcaaaaaccttgtgctagttgatgaa
ttggacagcctctctcccattttattttgtcagatagctgatctggccaatgaagacaca
ccacagctctatgtggcctgtggtagaggaccccgatcatctctgagagtcctaagacat
ggacttgaggtatcagaaatggctgtgtctgagttacccggtaaccccaatgctgtctgg
acagtgcgtcggcacatcgaagatgagtttgatgcctacatcattgtgtctttcgtgaat
gccacacttgtgttgtcaatcggagagactgtggaagaagtgactgactctgggttcttg
ggcaccaccccaaccttgtcctgctcattgctaggagatgatgccttggtgcaggtatat
cctgatggcattcgacatatacgagcagacaagcgagtcaatgagtggaagactcctgga
aagaaaacgattgtaaaatgtgcagtgaaccagcgacaagtggtgatcgccctgacagga
ggagagctggtctattttgagatggatccttcaggacagctgaatgagtacacagagcgg
aaggagatgtcagcagacgtggtgtgcatgagtctggccaatgtgcctcctggagaacaa
cggtctcgcttcctggctgtggggctggtggacaatactgtcagaatcatctctctggac
ccctcagactgtttgcagcccctgagcatgcaggctctcccagcccagcctgagtccttg
tgtattgtggaaatgggtgggactgagaagcaagatgaactgggtgagaggggctctatt
ggcttcctatacctgaatattgggttgcagaatggtgtgctgctgagaactgtcctggac
cctgtcactggggacctctctgacacccgcactaggtacctggggtctcgtcctgtgaaa
ctctttcgcgtccggatgcaaggccaagaggcagtgttggccatgtcaagccgctcatgg
ttgagctattcctaccagtctcgtttccatctcacccccttgtcttatgagactctcgag
tttgcatctggcttcgcttctgaacagtgtcctgaggggattgtggctatctccaccaat
accctgaggattttagcgttggagaagctaggtgctgtcttcaatcaagtagcctttcca
ctgcagtacacacccaggaaatttgtcattcaccctgagagcaacaaccttatcataatt
gagacagaccacaatgcctatactgaagcgacaaaggctcagaggaagcagcagatggca
gaggaaatggtagaagcagcgggagaagatgagcgggagcttgctgctgaaatggcagca
gcgttcctcaatgaaaacctccctgagtccatttttggagctcctaaggctggcaatggg
cagtgggcttctgtgatccgagtgatgaatcctattcaagggaacacgctggaccttgtc
cagctagaacagaatgaggctgcttttagtgtggctgtgtgtaggttctctaacactggt
gatgattggtatgtcttggtgggcgtggccaaagacctgatcctcaaccccaggtctgtg
gcagggggctttgtctatacctacaagctcgtgaacaatggggaaaaactggagtttttg
cacaagactccagtggaagaggtccctgctgccattgccccattccaagggagagtattg
attggtgtggggaagcttctgcgagtttatgacctggggaagaagaaattactccgaaaa
tgtgagaacaagcatattgccaattacatctctgggatccagactattgggcacagggta
attgtgtctgatgtccaagaaagtttcatctgggttcgatataagcgtaatgagaaccag
ctcatcatttttgccgatgatacttacccacgatgggtcactacagctagcctcctggac
tatgacactgtggctggggcagacaagtttggcaacatttgtgtggtgaggctcccacct
aacaccaatgacgaagtggatgaggatcccacaggaaacaaagccctgtgggaccggggc
ttgctcaatggggcctctcagaaggcagaggtgatcatgaactaccatgtgggtgagaca
gtgctgtcattacagaagaccacactgatccccggaggctctgaatcacttgtctatacc
accttgtcaggaggaattggcatccttgtcccgttcacatcccatgaggaccatgacttc
ttccagcatgtggaaatgcacctacggtctgagcatccccctctctgtgggcgagaccac
ctcagctttcgttcctattacttccctgttaagaatgtgatagatggagacctctgtgag
cagttcaactccatggagcccaacaaacagaagaacgtctctgaagaactggaccgaact
ccacctgaagtgtccaagaagcttgaggacatccggacccgctatgccttctga
DBGET
integrated database retrieval system