KEGG   Vulpes lagopus (Arctic fox): 121500261
Entry
121500261         CDS       T07435                                 
Symbol
SF3B3
Name
(RefSeq) splicing factor 3B subunit 3
  KO
K12830  splicing factor 3B subunit 3
Organism
vlg  Vulpes lagopus (Arctic fox)
Pathway
vlg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vlg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121500261 (SF3B3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vlg03021]
    121500261 (SF3B3)
   03041 Spliceosome [BR:vlg03041]
    121500261 (SF3B3)
   03036 Chromosome and associated proteins [BR:vlg03036]
    121500261 (SF3B3)
Transcription machinery [BR:vlg03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     121500261 (SF3B3)
Spliceosome [BR:vlg03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    121500261 (SF3B3)
 Complex B
    121500261 (SF3B3)
 Complex C
   U2 SnRNP specific factors
    121500261 (SF3B3)
Chromosome and associated proteins [BR:vlg03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    STAGA complex
     121500261 (SF3B3)
    TFTC complex
     121500261 (SF3B3)
SSDB
Motif
Pfam: Beta-prop_RSE1_1st Beta-prop_RSE1_2nd CPSF_A Beta-prop_BBS7
Other DBs
NCBI-GeneID: 121500261
NCBI-ProteinID: XP_041627760
LinkDB
Position
10:103332838..103385525
AA seq 1217 aa
MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG
DDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRT
PPEVSKKLEDIRTRYAF
NT seq 3654 nt   +upstreamnt  +downstreamnt
atgtttctatacaacttgaccttgcagcgagccacaggcatcagctttgccattcatggc
aacttttctggaaccaaacaacaggaaattgttgtttcccgtgggaagatactggagctg
cttcgccctgaccccaacactggcaaagtacatactctgctaactgtggaagtatttggt
gttatcagatcactcatggcctttaggctaacgggtggcaccaaagactacattgtggtt
ggcagtgactcaggtcggatagttatcctggaataccagccatccaagaatatgtttgag
aaaattcaccaagaaacgtttggcaagagcggatgccgccgcattgttcctggacagttc
ttagctgtggatcccaaagggcgagctgttatgattagtgccattgaaaaacagaaattg
gtatatatcttgaacagagatgctgcagcccggcttaccatttcatcccctctagaggcc
cacaaagcgaacactttagtatatcatgtggtcggagtagatgtgggatttgaaaatcca
atgtttgcttgtctggaaatggattatgaggaagcagacaatgatccaacaggggaagca
gcagctaatacccagcagacgcttaccttctatgagttagaccttggtttaaatcatgtg
gtccgaaagtacagtgaacctttggaggaacatggcaactttcttattacagttcctgga
gggtcagatggtccaagtggagtgctaatctgctctgaaaactatatcacctacaagaac
tttggtgaccaaccggatatccgctgtccaattcccaggagacggaatgacctggatgac
cctgaaagaggaatgatttttgtttgctctgccacccataagaccaaatcaatgttcttc
tttttggcccaaactgagcagggagatattttcaagatcactttggagacagatgaagat
atggttactgagatccggctcaagtactttgatactgtgcctgttgctgctgccatgtgt
gtgcttaaaacaggcttcctttttgtagcatcagaatttggaaaccattacttgtatcaa
atagcacatcttggagatgacgacgaagaacccgaattttcgtctgccatgcctctggaa
gaaggagacacatttttcttccagccacgaccactcaaaaaccttgtgctagttgatgaa
ttggacagcctctctcccattttattttgtcagatagctgatctggccaatgaagacaca
ccacagctctatgtggcctgtggtagaggaccccgatcatctctgagagtcctaagacat
ggacttgaggtatcagaaatggctgtgtctgagttacccggtaaccccaatgctgtctgg
acagtgcgtcggcacatcgaagatgagtttgatgcctacatcattgtgtctttcgtgaat
gccacacttgtgttgtcaatcggagagactgtggaagaagtgactgactctgggttcttg
ggcaccaccccaaccttgtcctgctcattgctaggagatgatgccttggtgcaggtatat
cctgatggcattcgacatatacgagcagacaagcgagtcaatgagtggaagactcctgga
aagaaaacgattgtaaaatgtgcagtgaaccagcgacaagtggtgatcgccctgacagga
ggagagctggtctattttgagatggatccttcaggacagctgaatgagtacacagagcgg
aaggagatgtcagcagacgtggtgtgcatgagtctggccaatgtgcctcctggagaacaa
cggtctcgcttcctggctgtggggctggtggacaatactgtcagaatcatctctctggac
ccctcagactgtttgcagcccctgagcatgcaggctctcccagcccagcctgagtccttg
tgtattgtggaaatgggtgggactgagaagcaagatgaactgggtgagaggggctctatt
ggcttcctatacctgaatattgggttgcagaatggtgtgctgctgagaactgtcctggac
cctgtcactggggacctctctgacacccgcactaggtacctggggtctcgtcctgtgaaa
ctctttcgcgtccggatgcaaggccaagaggcagtgttggccatgtcaagccgctcatgg
ttgagctattcctaccagtctcgtttccatctcacccccttgtcttatgagactctcgag
tttgcatctggcttcgcttctgaacagtgtcctgaggggattgtggctatctccaccaat
accctgaggattttagcgttggagaagctaggtgctgtcttcaatcaagtagcctttcca
ctgcagtacacacccaggaaatttgtcattcaccctgagagcaacaaccttatcataatt
gagacagaccacaatgcctatactgaagcgacaaaggctcagaggaagcagcagatggca
gaggaaatggtagaagcagcgggagaagatgagcgggagcttgctgctgaaatggcagca
gcgttcctcaatgaaaacctccctgagtccatttttggagctcctaaggctggcaatggg
cagtgggcttctgtgatccgagtgatgaatcctattcaagggaacacgctggaccttgtc
cagctagaacagaatgaggctgcttttagtgtggctgtgtgtaggttctctaacactggt
gatgattggtatgtcttggtgggcgtggccaaagacctgatcctcaaccccaggtctgtg
gcagggggctttgtctatacctacaagctcgtgaacaatggggaaaaactggagtttttg
cacaagactccagtggaagaggtccctgctgccattgccccattccaagggagagtattg
attggtgtggggaagcttctgcgagtttatgacctggggaagaagaaattactccgaaaa
tgtgagaacaagcatattgccaattacatctctgggatccagactattgggcacagggta
attgtgtctgatgtccaagaaagtttcatctgggttcgatataagcgtaatgagaaccag
ctcatcatttttgccgatgatacttacccacgatgggtcactacagctagcctcctggac
tatgacactgtggctggggcagacaagtttggcaacatttgtgtggtgaggctcccacct
aacaccaatgacgaagtggatgaggatcccacaggaaacaaagccctgtgggaccggggc
ttgctcaatggggcctctcagaaggcagaggtgatcatgaactaccatgtgggtgagaca
gtgctgtcattacagaagaccacactgatccccggaggctctgaatcacttgtctatacc
accttgtcaggaggaattggcatccttgtcccgttcacatcccatgaggaccatgacttc
ttccagcatgtggaaatgcacctacggtctgagcatccccctctctgtgggcgagaccac
ctcagctttcgttcctattacttccctgttaagaatgtgatagatggagacctctgtgag
cagttcaactccatggagcccaacaaacagaagaacgtctctgaagaactggaccgaact
ccacctgaagtgtccaagaagcttgaggacatccggacccgctatgccttctga

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