Vulpes lagopus (Arctic fox): 121500297
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Entry
121500297 CDS
T07435
Symbol
KDM1B
Name
(RefSeq) lysine-specific histone demethylase 1B
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
vlg
Vulpes lagopus (Arctic fox)
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vlg03036
]
121500297 (KDM1B)
Chromosome and associated proteins [BR:
vlg03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
121500297 (KDM1B)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
zf-CW
Pyr_redox
Pyr_redox_2
Thi4
SWIRM
DAO
HI0933_like
FAD_binding_3
Lycopene_cycl
Pyr_redox_3
FAD_oxidored
FAD_binding_2
NAD_binding_9
GIDA
AlaDh_PNT_C
2-Hacid_dh_C
NAD_binding_7
KARI_N
zf-RING_2
TrkA_N
YjeF_N
Shikimate_DH
Phage_zn_bind_8
Motif
Other DBs
NCBI-GeneID:
121500297
NCBI-ProteinID:
XP_041627839
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Position
10:complement(9149473..9209426)
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AA seq
820 aa
AA seq
DB search
MATPRRRTKKKASFDHSPDSLPLRSSGRQAKKKATETTDDDEDGGSEKKYRRCEKSGCTV
ACPVCFASASERCAKNGYTSRWYHLSCGEHFCNECFDHYYRSHKDGYDKYTTWKKIWTSN
GKTEPSPKAFMADQQLPYWVQCTKPECRKWRQLTKEIHLTPHIARTYRCGMKSNTTVKPE
TSDHCSLPEDLRVSEVSNHWWYSMLILPPLLKDSVAAPLLSAYYPDCVGMSPSCASTHRV
AGNTSPGKLEHSKAVPSVLVPGMNRYFQPFYQPNECGKALCVRPDVMELDELYEFPEYSR
DPTMYLALRNLILALWYTNCKEALTPQKCIPHIIVRGLVRIRCVQEVERILYFMTRKGLI
NTGVLSVGTDQYLLPKDYHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVW
DDKSFKGVTVGRGAQIVNGCINNPVALMCEQLGISMHKFGERCDLIQEGGRITDPTIDKR
MDFHFNALLDVVSEWRKDKTQLQDVPLGEKIEEIYKAFIKESGIQFSDLEEQVLHFHLSN
LEYACGSSLQQVSARSWDHNEFFAQFAGDHTLLTPGYSVILEKLAEGLDIRLESPVQSID
YSGDEVQVTITDGTGCTAQKVLVTVPLALLQKGAIHFNPPLSDKKMKAINSLGAGIIEKI
ALQFPYRFWDSKVQGADFFGHVPPSASKRGLFAVFYDMDPQKKHSVLMSVVAGEAVASIR
TLEDKQVLQQCMAALRELFKEQEVPDPTKYFVTRWSTDPWIQMAYSFVKTGGSGEAYDII
AEEIQGTVFFAGEATNRHFPQTVTGAYLSGVREASKIAAF
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaccacggaggaggacaaagaaaaaagcatcttttgatcattctccagatagc
ctgcctttgaggagctccggtaggcaggcgaagaaaaaagcaacagagacaacagacgac
gacgaggatggcgggtctgagaagaagtacaggagatgtgagaagtcaggctgcacagtc
gcgtgtcctgtgtgctttgcaagcgcttcggaaagatgtgccaagaatggctacacatcc
cgatggtatcacctctcctgtggggagcatttctgtaatgaatgctttgaccattactac
agaagccacaaggatggatatgacaaatatactacctggaaaaaaatatggactagcaat
gggaaaaccgaacctagtcccaaagctttcatggcagatcagcagctcccctactgggtt
cagtgtacaaaacctgagtgtagaaaatggagacagcttaccaaggagatccatcttact
ccacatatagcgaggacctaccgatgtggtatgaaatcaaatactactgttaagcccgag
acctcagatcattgttcccttccagaggatctaagagtgtcggaagtttccaaccactgg
tggtactccatgctcatcctccctcctttgctgaaagacagcgtggcagcgcccctgctc
tctgcctactaccctgactgcgttggcatgagcccctcctgtgccagcacgcaccgcgtg
gccggcaacaccagccccgggaagctggagcactccaaggcggtcccctctgtgctggtt
ccaggcatgaaccggtacttccagcccttctaccagcccaacgagtgtggcaaagccctg
tgcgtgaggccggacgtgatggagctggacgagctctatgagttccccgagtattcccga
gaccccaccatgtacctggccttgaggaacctcatcctcgcactgtggtacaccaactgc
aaagaagctcttacccctcagaaatgtatccctcacatcattgtccggggtctcgtacgc
atccggtgcgttcaggaggtggagaggatactttattttatgacgaggaaaggtctcatc
aacacgggagttctcagcgtcggcactgaccagtatcttcttcctaaagattaccacaac
aaatcagtcatcattatcggggctggtccagcaggattagcagctgctaggcaactgcat
aactttggaattaaggtaactgtcctggaagccaaagacagaattggaggccgagtatgg
gatgataaatcctttaaaggcgtcacagtgggaagaggagcccagattgtcaatggctgt
atcaacaacccagtagccctaatgtgtgaacaacttggcatcagcatgcataaatttgga
gagagatgtgacttaattcaggaaggtggaagaataactgaccccaccattgacaagcgc
atggactttcattttaatgctctcttggatgttgtctctgagtggagaaaggataagact
cagctccaagatgttcctttaggagaaaagatagaagagatctacaaagcttttattaag
gagtctggcatccagttcagtgacctcgaggaacaggtgcttcacttccacctcagtaac
ctggagtatgcctgtggcagcagcctccagcaggtatctgctcgctcctgggaccacaac
gaattctttgcccagtttgctggtgaccacactctgctaacacctggctactccgttatc
cttgagaaactggcagaaggcctagacattcggctcgagtctccggtacagagcattgat
tattctggagatgaagtgcaggttaccattacggatgggacagggtgtacggcacaaaag
gtactagtgactgtccccttggccctgctgcagaagggtgccattcactttaacccaccg
ctgtcagacaagaagatgaaggccatcaacagcctgggcgcgggcatcattgaaaagatt
gccttgcaattcccgtacagattctgggatagtaaagttcaaggggctgacttctttggt
cacgttcctcccagtgccagcaagcggggcctctttgctgtgttctatgacatggatccc
cagaagaagcacagcgtgctgatgtccgtggtggctggggaggctgtggcgtccatcagg
accctggaggacaagcaggtgctgcagcagtgcatggctgccctccgggagctgttcaag
gagcaggaagtcccagaccccaccaagtattttgtcactcggtggagcacagacccctgg
atccagatggcctacagcttcgtgaagacaggcgggagcggagaagcctacgatatcatt
gctgaggaaatacagggaactgtcttttttgccggcgaggcaacaaacaggcatttccca
caaactgtcacaggggcatatttgagtggtgttcgagaagcaagcaagattgcagcattt
tga
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