Vulpes lagopus (Arctic fox): 121500429
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Entry
121500429 CDS
T07435
Symbol
NUP88
Name
(RefSeq) nuclear pore complex protein Nup88 isoform X1
KO
K14318
nuclear pore complex protein Nup88
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg03013
Nucleocytoplasmic transport
vlg05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121500429 (NUP88)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
121500429 (NUP88)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vlg03019
]
121500429 (NUP88)
Messenger RNA biogenesis [BR:
vlg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121500429 (NUP88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup88
DUF7344
DUF4404
Motif
Other DBs
NCBI-GeneID:
121500429
NCBI-ProteinID:
XP_041628063
LinkDB
All DBs
Position
10:57752832..57774293
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AA seq
768 aa
AA seq
DB search
MAAAEGPTGDGEPWQSWLPNHVVFLRLREGLKTHGPAEAEKPASSPSPSSPPPLTRNLVL
GLGGDLFLWDGDGSAFLVVRLRGLGGAGDEPSLSQYQRLLCINPPLFEIYQVLLSPTQHH
VALIGIKGLMVLELPKRWGKNSEFEGGKLAVNCSTTPIAERFFTSSTSLTLKHAAWYPSE
LLDPHIVLLTSDNVISQASYPSFPDLPERAPLVLLLFWRRCTIRRIYSLREPQTPTRVIV
LSEAEEESLILNKGRAYTASLGETAVAFDFGPLSAVSKSMFGQKGKGDVVAHPLYILYEN
GETFLTYLSLAHSPGTVGKLLGPLPMHPAAEDNYGYDACAILCLPCVPNILVIATESGML
YHCVVLEGEEEDDQVSEKSWDSRADIIPSLYVFECVELELALTLAAGDDEPCDSDFSCPI
KLHRDPKCPSRYHCTHEAGVHSVGLTWIHKLHKFLGSDEEDKDSLQELAAEQKCFVEHIL
CTKPLPCRHPAPIRGFWIVPDILGPTMVCITSTYECLIRPLLSTVHPVSPPLLCTREDVA
AAESPLRILAETADSFEKHIRSILQRSVANPAFLKSADRDMAPPPEECLQLISRATQVFR
EQYILKQDLAKEEIQRRVKLLCDQKKKQLEDLSYCREERKSLREMAERLADKYEEAKEKQ
EDLMNRMKAVLHRFHTQLPVLSDSERDMKKELQLIPEQLRHLGNAIKQVTMKKDYQQRKM
QKVLSPQKPAITLSAYQRKCIQSVLKEEGEHIREMVKQINDIRNHINF
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggcagccgccgaagggcccacgggtgacggggagccgtggcagtcctggcttcccaac
cacgtcgtgttcctgcggctccgcgaggggctgaagacccacggcccggccgaggctgag
aagccggcgtcttcgccgtcgccctcgtcgccgccgccgctgacgaggaaccttgtcttg
ggcctgggcggcgatctcttcctgtgggacggcgacggcagcgccttcctggtggtccgc
ctgcgaggcctgggcggcgcgggcgacgagccctccttgtcccagtaccagagattgctc
tgcataaatccacccctgtttgaaatctatcaagtcctgttaagtccgacacagcatcat
gtagcacttataggaataaaaggcctcatggtgttagaactacctaaaagatgggggaag
aattcagaatttgaaggtggaaaattagcagtgaactgtagtaccactcccatcgctgag
agatttttcaccagttctacttctctgactctgaagcatgcggcctggtacccaagtgag
ctgctggatccccacattgtgctcttaacgtcagacaatgtaataagccaggcctcctac
ccctccttccctgaccttcctgagagagcccctctcgtcctgttgctcttctggaggcga
tgcaccataagaaggatttactctctgcgtgagcctcagacacccaccagggtcatcgtg
ctttcagaagcggaagaggaaagcctgatactcaataaaggaagggcgtatactgcatcg
ctgggggagacagcagttgcatttgactttgggccactgtcggcagtctcgaagagcatg
tttgggcagaaaggcaaaggggatgtcgtagcgcacccattgtacatcttgtatgagaac
ggggaaaccttcctcacgtacctcagtctggcgcacagcccggggacagtcggaaagctg
ctgggcccattgcccatgcaccctgcagctgaggacaactatggctatgacgcgtgcgcc
atcctctgcctgccttgtgtccccaacatcttggtgatcgccactgaatcgggaatgctg
tatcactgcgtcgtgctggagggggaggaagaggacgaccaagtgtcagagaagtcctgg
gactccagggctgacatcatcccttccctgtacgtgttcgagtgcgtggagctggagctc
gccctgactctggcggccggagacgacgagccctgtgactctgacttctcttgtccaatc
aaacttcacagagatcccaagtgtccctcaagataccactgtactcatgaagccggtgta
cacagtgtcgggcttacttggattcataaacttcacaagttccttgggtcagacgaggag
gataaggacagtctgcaggagctcgctgccgagcagaagtgctttgtggagcacatcctc
tgcaccaagccgctgccctgcaggcacccggcgcccatccgcggcttctggattgtgcct
gacatcctggggcccacgatggtgtgcatcaccagcacctacgagtgcctcatcaggccc
ttactaagcacagtccacccggtgtccccgcccctgctctgtacccgggaagacgtggca
gcggcggagtctcccctccgcattctagctgaaaccgcagattccttcgaaaagcacatc
aggagcattttacaacggagcgtcgcgaacccagccttcctgaaatccgcggacagagac
atggccccgccccccgaggagtgcctgcaactcatcagcagagccacgcaggtgttccgg
gagcagtacatcctcaagcaggacctggccaaggaggagatccagcgcagggtcaagtta
ctctgtgaccagaagaagaaacaactggaagacctcagttactgccgagaggagaggaaa
agtctccgggaaatggcggagcgcttggctgacaaatacgaggaagccaaggaaaaacag
gaggatctcatgaacaggatgaaggccgtgctgcaccgcttccacacgcagctcccggtt
ctctctgacagtgagcgggacatgaagaaggagctgcagctgatccccgagcagctgcgc
cacctgggcaatgccatcaagcaggtcaccatgaagaaggattaccagcagcgcaagatg
cagaaggtgctgagccctcagaaacccgccatcacgctgagcgcctaccagcgcaagtgc
atccagtcggtcctgaaggaggagggcgagcacataagagagatggtgaagcagattaat
gacatccgaaaccacatcaacttctga
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