Vulpes lagopus (Arctic fox): 121500609
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Entry
121500609 CDS
T07435
Symbol
TAF1C
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C isoform X1
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
vlg
Vulpes lagopus (Arctic fox)
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vlg03021
]
121500609 (TAF1C)
Transcription machinery [BR:
vlg03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
121500609 (TAF1C)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF1C_HB
TAF1C_beta-prop
TAF1C_C
Motif
Other DBs
NCBI-GeneID:
121500609
NCBI-ProteinID:
XP_041628400
LinkDB
All DBs
Position
10:94704917..94713843
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AA seq
885 aa
AA seq
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MDFPSSLHPTLFMTGPLGLSNVPDMSFMCSWRDALTLPENSQNGVPRLATGLLWEPETPG
PLPLLPPGPDPWDPGVTAQDLLFRGGFSFRRKPQAVLDVTEQLSRFLWDHGDIAFAPLGK
LMLENFKLEGAGSRSKKKTVVSVKSLLQDLGGHQPWGCPWAFLSFRQRRFSILGGPVLGK
SVASLLGELLHEELAMRWEQLLLDDAFTGGALAWVPGRTPHVGQLVYPAGGALDKLYFQE
VNLTPNGDPQALGDPGHIQLRGPVRQVVTRTVQGECESLGYFPPLRLRPWLACCLTGPAS
LYPSALLAVRSDYHCALWKVSKQGHPAPLQVLQVGKGATGISLSPHLPGELAVCSRSGTV
CLWTPQDGLQQVYKDPETLVFWDPSPWRWADFTAHPRVLTVGDRTGVKMIDTKGPPGCGL
LLFRGGAEASCQKGERVLLTQYLGKCGPEPLLPTVHLICTQFSLYLMDERLPLVPMLKWD
HGLPSAPLWAQLQPPPRPGHPQPLILGGQGGHLQLLHLTGEGASVPRLAGPPQSLPSSSD
SLSAFPLLEPRSQWRLQERLKAPTIGLAATIPSSASKPVLSLFQLSAAGDVFYQRLRLQA
EPGHHSRAPTASWTPQATACCSRWLKTLLEVPPTPPVWAAPTFSNRCLLNQVEPSKVEQK
VPEGLRAAMAEGRLLQQRDLGSLPSAEPPPAPEPGPENELSARLEAAWEGRVAAWWEKQQ
GRSSGPRKPPKRHKRRTQLSSTFSSLSGRLDLSDATSPPHSPDRTSSEARPQPLATPPSQ
ELTQELWAQGVPSERQQTLRDYMAKLPVQGDAPGEVSSSLSQSATPSWQQTLQGGATQLP
PRRNPPRGAALPSSQTSSFQATPSRQQTPGLSGSQRHRKKPRMGF
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atggatttccctagctctctccatcccacactgtttatgactggtccccttggtctgagt
aatgtccctgacatgtccttcatgtgtagctggagagacgcactgaccctgcccgagaac
tctcagaatggggtgccgcgcttggccacgggcctactctgggagccagagaccccgggg
cctcttcctttgctgcctcctggtcctgatccctgggaccctggggtgactgcccaggac
ctgcttttccggggaggcttctcattccgaaggaagccccaggcagtgctggatgttacc
gaacagctcagtcggttcctgtgggaccatggggacatagcctttgcacccctggggaag
ctgatgctggagaatttcaaactggagggagcagggagtcgttctaagaagaagacagtg
gtcagtgtgaagagtctactccaggacctcggtggacaccagccctggggctgtccctgg
gctttcctcagcttccgacagcgccgattctccatccttgggggccctgtcctgggcaag
tcagtggccagccttctgggagagctgctgcatgaggagctggctatgcggtgggagcag
ctgcttctggatgatgcgttcacagggggcgctctggcctgggtgcccggcaggacgccc
cacgttggacagttggtctaccctgcgggaggtgctctagacaagctctatttccaagag
gtcaatctgaccccaaatggtgaccctcaggctcttggggaccctggccacatccagctt
cgaggacctgtacggcaggtggtgactcgcactgtgcaaggggaatgtgagtcccttgga
tacttccctcccctccgcctccgcccctggctggcctgctgcctaactggccctgcctct
ctctatccctcagccctgctggctgtccgctctgactaccactgtgccctgtggaaggtc
agtaagcagggacaccctgcccctctccaggtgctgcaggtcgggaagggggccacaggg
atcagcctcagccctcacctgcctggggagctggctgtctgcagccgttccggaaccgtc
tgtctgtggactccccaggatgggctgcagcaagtctacaaggaccctgagacccttgtg
ttctgggacccctctccctggcgttgggcagacttcactgctcatccccgggtgctgacc
gtgggtgaccgcacaggagtgaaaatgattgacactaagggcccacccggatgtggcctg
ctgctattccgtggcggggcggaagcatcatgccagaaaggggaacgtgtcctgctgacc
cagtacctggggaagtgtggccctgagcctctgcttcccacggtccatctcatttgtacc
cagttctccctctacctgatggacgagcgcctccccctggtgcccatgctgaagtgggac
cacggcctcccctctgctcctctgtgggcccagctgcagccgccaccgcgccccgggcac
ccacagccactaatcctggggggccagggcgggcacctgcagctgctgcacctcacagga
gagggggcgtctgtaccccggctggcggggcccccccagtctctcccttccagtagcgac
tccctttccgcattccccttgctggagcccaggagtcagtggcggctgcaggagcgtctg
aaagcaccaaccataggcctggccgccaccatcccgtcctcagcttccaagccagtcctg
tcactcttccaactctcggcagctggggatgttttctatcagcgcctccgcctccaggca
gaacccgggcatcactcccgtgcacccacagcttcttggactccccaagccactgcctgc
tgcagccggtggctaaagaccctgctggaggtacccccgactccgcctgtgtgggcagca
cccaccttttccaaccgctgtctgctcaaccaggtggaaccaagcaaggtggagcagaaa
gtgccggagggtctccgagcagccatggctgaaggacggttgctacagcagagggacctg
ggctcactcccctctgcggagccgccccccgcccctgagccaggccctgagaatgagctt
agtgcacgtttggaggcagcctgggaaggccgggtggctgcctggtgggagaagcagcag
ggcaggagctccgggcccagaaaaccacctaagcggcacaagcgccggactcagttgtcc
agtactttctcctcactcagtggccgcctggacctctcagatgccaccagcccgcctcac
agcccagaccggacgtcatctgaggccaggcctcaacccctggcgaccccaccctcccag
gagttgactcaggagctgtgggctcagggtgtcccctcagagcggcagcagaccctccgg
gactacatggccaagctgccagtccaaggggatgccccaggagaggtctcctcatccctc
tcccagagcgccacgccctcctggcagcagaccctccagggtggtgcaacccagctgccg
ccacgaaggaaccccccaagaggtgcggctctcccgtcttcccagacctccagcttccag
gccaccccctccaggcaacagacacccggcctctccggctctcaacgacaccggaagaag
ccccgcatgggcttctga
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