Vulpes lagopus (Arctic fox): 121501017
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Entry
121501017 CDS
T07435
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
vlg
Vulpes lagopus (Arctic fox)
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vlg03036
]
121501017 (CHD5)
Chromosome and associated proteins [BR:
vlg03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
121501017 (CHD5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
HDA2-3
ResIII
PHDvar_NSD
HTH_CHD1_Hrp3
DEAD
PHD_2
AAA_22
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
121501017
NCBI-ProteinID:
XP_041629064
LinkDB
All DBs
Position
10:complement(86513969..86574840)
Genome browser
AA seq
1949 aa
AA seq
DB search
MRGPLGTEEELPRLFADEMENEDEMSEEEDGGLGGFDDYFPEEPVGLPKKKKSKKLKENR
SKGKRKKKEGSNDELSENEDDLEEKSESEGSDYSPNKKKKKKLKDKKEKKAKRKRKDDDE
DDNDDGCLKEPKSSGQLMAEWGLDDVEYLFSEADYHTLTNYKAFSQFLRPLIAKKNPKIP
MSKMMTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVTIAPPLAISPQQPPQPVPIR
KAKTKEGKGPGVRKKIKGSKDAKKKGKGRKVAGLKFRFGGISNKRKKGSSSEEDEREESD
LDSASIHSSSVRSEGSTALGKKSKRRRKKKRIDDGDGYETDHQDYCEVCQQGGEIILCDT
CPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKDDDDDEEEGGCEEEEDDHMEFCR
VCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWRWTEP
PAPFMVGLPGPDVEPGVPPPKPLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYR
NYQRKNDMDEPPPFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMIHRILNH
SFDKKGDVHYLIKWKDLPYDQCTWEIDDIDIPYYDNLKQAYWGHRELMLGEDARLPKRLV
KKGKKLKDDKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTD
TILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTY
TGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIE
WACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNN
LEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYY
KFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLV
KSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQ
EAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQN
KKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEEL
FKDDVEGMMSQGQRPVTPIPDVQSSKGGALAASAKKKHGSTPPGDNKDVEDSSVIHYDDA
AISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYW
EKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDED
EDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWG
MPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHV
LTRIGVMSLVRKKVQEFEHVNGKYSTPDLIPEGPEGKKPSEVISSDPNTPVPASPAHLLP
APLGLSDKMEAQLSYMDEKELGVQKPKKPPEIQALPTALDRVEGEDKHESSDGKERLEET
EKAPPSPEQLPKEEMLPEKEKILDKLELSLIHSRGDGNDFRPDDTRVEEKEPIETQQNGD
KEDDEEGKKEDKNGKFKFMFNIADGGFTELHTLWQNEERAAVSSGKIYDIWHRRHDYWLL
AGIVTHGYARWQDIQNDPRYMILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQALVIEEQ
LRRAAYLNMTQDPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLE
ELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTNRAGDPTIQQGAFGNSQMYNN
NFGPNFRGPGPGGIVNYNQMPLGPYVTDI
NT seq
5850 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcccgctgggcaccgaggaggagctgccgcggctgttcgcggacgagatggag
aacgaggacgagatgtcagaagaagaagatggtggccttggaggctttgatgactatttc
cctgaggagccggtgggccttcccaagaagaagaaatccaagaagctcaaggagaacagg
tccaaagggaagcggaagaagaaagaggggagcaatgatgagctgtcggaaaatgaagat
gatctggaagagaagtcagagagtgaaggcagtgactactcccccaataaaaagaagaaa
aaaaagctcaaggacaagaaggagaagaaagccaagcggaaaaggaaggatgatgatgag
gatgataatgatgatgggtgtctaaaggagcccaagtcctcagggcagctcatggccgag
tggggcctggatgacgtggagtacctgttctccgaggctgactaccatacgctgaccaac
tacaaggccttcagccagttcctcaggccgctcatcgccaagaagaacccaaagatcccc
atgtccaaaatgatgactgttctgggtgccaagtggcgggagttcagcgccaacaaccct
ttcaaggggagctcagcagcagcagctgcagcagcagtggctgcggctgtggagacagtc
accatcgcccctccgctggccatcagccctcagcagccaccccagcctgtacccatccgc
aaggccaagaccaaggagggcaagggtccgggagtgagaaagaagatcaaaggttccaag
gatgcaaagaaaaagggaaaggggagaaaggtcgcagggctcaagttccgctttggaggg
atcagcaacaagaggaagaaaggctcctcgagtgaggaagatgagcgggaggagtcggac
ttggacagtgccagcatccacagctcctctgtgcgctctgagggctccactgccctgggg
aagaagagcaagaggcggcgcaagaagaagaggattgacgatggtgatggctacgagacc
gaccaccaggactactgtgaggtgtgccagcagggtggggagatcatcctgtgtgacacc
tgcccgcgggcctaccacctcgtctgccttgacccagagctggagaaggctcccgagggc
aagtggagctgtccccactgcgagaaggaggggatccagtgggagccaaaggacgacgac
gacgatgaggaggagggcggctgcgaggaggaggaggacgaccacatggagttctgccgc
gtgtgcaaggacggcggcgagctgctctgctgcgacgcgtgcccctcctcctaccacctg
cactgcctcaacccgccgctgcccgagatcccaaacggtgaatggctctgcccgcgctgt
acttgccccccactgaagggcaaagtccagcggatcctacactggaggtggacggagccc
cctgcccccttcatggtggggctaccagggcccgacgtggagcctggtgtccccccaccc
aagcccctggagggcattccggagagagagttctttgtcaagtgggctgggctctcctac
tggcactgctcctgggtgaaagagttacagctggagttataccacacggtgatgtatcgc
aactaccaaagaaagaatgacatggacgagccaccaccctttgactacggctccggtgat
gaggatggcaaaagtgagaaaaggaagaacaaggaccctctctatgccaagatggaggag
cgcttctaccgctatggcatcaagcctgagtggatgatgattcaccgcatcctgaaccac
agcttcgacaagaagggggacgtgcattacctgatcaagtggaaggacttgccctatgac
cagtgtacctgggagattgacgacattgacatcccctactatgacaacctgaagcaggcc
tactggggccacagggagctgatgctgggtgaggacgccaggctgcccaagaggctggtc
aagaaaggcaagaagctcaaggacgataaacaggagaaaccgccagacacacccattgtg
gatcccacggtcaagtttgacaagcagccctggtacattgactcgacgggtggcacgctg
cacccgtaccagctggagggcctcaactggctgcgcttctcctgggcccagggcactgac
accatcctggctgacgagatggggctgggcaagaccgtgcagaccattgtcttcctctac
tctctgtacaaggaggggcactccaaggggccctatctggtcagtgctcccctgtccacc
atcatcaactgggagcgtgagttcgagatgtgggcacccgacttctatgtggtcacttac
acgggggacaaggagagccgctccgtgatccgagagaatgagttttcttttgaggacaac
gccattcggagtgggaagaaggtgtttcgcatgaagaaagaagtgcagatcaaatttcac
gtcctgctcacctcctatgagctcatcaccatcgaccaggccatcctgggctccattgag
tgggcctgcctcgtggtggacgaggcccaccggcttaagaacaaccagtccaagttcttc
agagtcttaaacagctacaagatcgattacaagctgctgctgacggggaccccccttcaa
aacaacctggaggagctctttcacctgctcaacttcctgactccagagagattcaacaat
ctggagggcttcctggaggagtttgccgatatctccaaggaagaccagatcaagaagctg
catgacctgctagggccacacatgctgaggcggctcaaggctgatgtcttcaagaacatg
ccagccaagactgagctgatcgttcgtgtggagctgagccagatgcagaagaagtactac
aagttcatcctcacgcggaacttcgaggcactcaactccaaggggggtgggaaccaggtg
tcgctgctcaacatcatgatggatctgaagaagtgttgcaaccacccctacctcttccca
gtggctgctgtggaggcccctgtcctgcccaatggctcctacgatggcagctccctggtc
aagtcttcaggcaagctcatgctgctgcagaagatgctcaagaagctgcgggacgaaggg
catcgtgtgctcatcttctcccagatgaccaagatgctggaccttctggaggacttcctg
gagtatgagggctacaagtatgagcggattgacggtggcatcacggggggcctccggcaa
gaggcgatcgacagattcaacgcccctggggcgcagcagttctgcttcctcctctccacc
cgggcgggtggcctgggcatcaacctggccacagcggacacagtcatcatctacgactcg
gactggaatccgcacaatgacatccaggccttcagccgtgcccaccgcatcggacagaac
aagaaggtgatgatctaccgctttgtgactcgggcctcagtggaggagcgcatcacacag
gtggccaagcgcaagatgatgctcacgcacctagtggtgcggcccggcctcggctccaag
tctggctccatgaccaagcaggagctggatgacatcctcaagttcggcacagaggagctc
ttcaaggacgatgtggagggcatgatgtctcagggccagaggcctgtcacgcccattcct
gatgtccagtcctccaaagggggagccctggctgccagtgccaagaagaaacatggcagc
accccgccaggtgacaacaaggacgtggaggacagcagtgtgatccactatgacgatgcg
gccatctccaaactgctggatcgaaaccaggacgccacggacgacacggagctgcagaat
atgaatgagtacctgagctccttcaaggtggcccagtacgttgtgcgcgaggaggacggc
gtggaggaggtggagcgggagatcatcaagcaggaagagaacgtggaccctgattactgg
gagaagctgctgcgccaccactatgagcagcagcaggaagacctggcccgcaatctgggc
aagggcaagcgcattcgcaagcaggtcaactacaacgatgcctcccaggaggaccaggag
tggcaggacgagctctcagataaccagtctgaatattccattggctctgaggatgaggac
gaggactttgaggaaaggccagaagggcagagtggacggcgacagtccaggaggcagctg
aaaagtgaccgggacaagcccctgccacctcttcttgcccgtgtgggtggcaacatcgag
gtgctgggcttcaatgcccggcagcggaaggcctttctgaacgccatcatgcgctggggc
atgcccccccaggacgccttcaactcccactggctggtgcgggacctccgagggaagagc
gagaaggagtttagagcctatgtgtccctcttcatgcggcacctgtgtgagccgggggct
gatggtgcagagaccttcgcggacggtgtgccccgggagggcctctcgaggcagcatgtg
ctcacccgcatcggggtcatgtcactagttaggaagaaggttcaggagtttgagcacgtt
aacgggaagtacagcaccccggacttgatccccgaggggcccgagggcaagaagccaagc
gaggtcatctcctcggaccctaacacgccagtgcctgccagtcctgcccacctcctgccg
gccccactgggcctgtcagacaaaatggaagcccagctaagctacatggatgagaaggag
ctgggggtgcagaaaccaaagaagcccccagaaatccaggccctgccaactgccctggac
agagtggagggcgaggacaagcatgagagctcagatggcaaggagcgactggaggagacg
gagaaggccccgccatccccagagcagctgccaaaagaagaaatgcttcctgagaaggag
aaaattctggacaagctggagctaagcttgattcacagcagaggggatggcaatgatttc
aggccagatgacaccagagtggaggagaaggagcccattgaaacacagcaaaatggtgac
aaagaggatgatgaggaggggaagaaggaggacaagaatgggaagttcaaattcatgttc
aacattgcagatggaggcttcacagagctacacacactgtggcagaatgaggaacgtgct
gctgtgtcctcggggaaaatctacgacatctggcaccggcgtcatgactactggctgctg
gcgggcatcgtgacgcatggctatgcccgctggcaggacatccagaatgacccaagatac
atgatcctcaacgagcccttcaagtccgagatccacaagggcaattacttggagatgaag
aacaagtttctggcccgtaggttcaagctactggagcaggcgctggtcatcgaggagcag
ctccggagggctgcctaccttaatatgacccaggaccccaaccacccagccatggccctc
aacgcccgcctggccgaggtggagtgccttgccgagagccaccagcatctgtccaaggag
tcccttgctgggaacaagccagctaacgccgtcctgcacaaggtcctgaaccagctggag
gagctgctaagcgacatgaaggcggacgtgacacgcctcccgtccatgctgtcccgaatc
ccccccgtggccgcccgcctccagatgtcggagcgcagcatcctgagccgcctgaccaac
cgagctggcgaccccaccatccagcagggcgctttcggcaactcccagatgtacaacaac
aactttgggcccaacttccggggccctggaccgggagggattgtcaactacaaccagatg
cccctggggccctatgtgaccgatatctag
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integrated database retrieval system
