Vulpes lagopus (Arctic fox): 121501482
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Entry
121501482 CDS
T07435
Symbol
RAG1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg04068
FoxO signaling pathway
vlg05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
121501482 (RAG1)
09160 Human Diseases
09163 Immune disease
05340 Primary immunodeficiency
121501482 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vlg04121
]
121501482 (RAG1)
Enzymes [BR:
vlg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121501482 (RAG1)
Ubiquitin system [BR:
vlg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121501482 (RAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-RAG1
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_4
zf-RING_UBOX
zf-RING_6
zf-RING_2
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
121501482
NCBI-ProteinID:
XP_041629473
LinkDB
All DBs
Position
11:complement(55793412..55798479)
Genome browser
AA seq
1043 aa
AA seq
DB search
MAVSLPPTLGLTSAPDEIQHPHIKFSEWKFKLFRVRSLEKAPEEAQIEKKVSSEGKPSLE
QSPAVPDKVDGQDAALSPPALKAHPKFLKEPHNDGKTRDKAIHQANLRHLCRICGNSLKT
DRRNRRYPVHGPVDGKTQVLLRKKERRATSWPDLIAKVFRIDVKADVDSVHPTDFCHKCW
KVMYRRFSSAPRGVCFPRKAAPEWLPHAPSCDLCRAARQGLKRKSPQPSAQLSKRLRTVL
ERAGRARGHRRRARARLCDSGATGKASDCGNVHLGTELLAVDFPAHFVKSISCRICEHIL
ADPVETTCKHVFCRVCILRRLKATGSHCPCCRYPCFPTDLESPGRSFLSILNSLMVKCPA
KGCDEEVSLERYNQHVAGHKDSDQTFVHINKGGRPRQPLLSLTRRAQKHRLRELKLQVKA
FADREEGGDVKSVCLALFLLALRARNEHRQADELEAVLQGRGPGLQPAVCLAIRVNTFLS
CSQYHKMYRTVKAITGRQIFQPLHALRAAEKALLPGHHAFEWQPPLQNVSSNAHVGIIDG
LSGLSPCVDDYPVGTIAKRFRYDAALVSALMDMQEDLLEGVRARGLDDHLGGPFTVVVKE
SCDGMGDVSEKHGGGPAVPEKAVRFSFTVMRITVAQGSESVQVFEEGKPNSELCCKPLCL
MLADEADHETLTAILSPLVAEREAMKSSRLLLEMGGTLRTFRFIFRGTGYDEKLVREVEG
LEASGSVYICTLCDATRLEASQNLVLHSITRSHSENLERYEVWRSNPYHESVDELRDRVK
GVSSKPFIETVPSIDALHCDIGNAAEFYKIFQLEIGQAYSKAGASKEERRRWQATLDKHL
RKKMNLKPIMRMNGNFARKLMTKETVEAVCELIPSEERHEALRELMDLYLKMKPVWRSSC
PAKECPESLCQYSFNSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAWA
SEGNESGNKLFRRFRKMNARQSKCYEMEDVLKHHWLYTSKYLQRFMNAHNAYKKSGPPFD
SQAGLGDPLGLEDSLETQDSMEF
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggctgtctctttgccacccaccctgggactcacttctgccccagatgagatccagcac
ccacatattaaattttcagaatggaaatttaaactgttcagggtgcggtctcttgaaaag
gcacctgaagaagctcaaatagaaaagaaagtttcctccgaggggaaaccctctctggag
caatctccagcagtcccggacaaggttgatggtcaggacgcagccctgagtccaccagca
ttgaaagctcaccccaagtttctgaaggaaccccacaatgatgggaaaacaagagacaaa
gcgatccaccaagccaaccttcgacatctctgccgtatctgtgggaattctttgaaaacg
gacaggcgtaataggaggtatccggtccacgggcccgtggatggcaaaacccaagtcctt
ctacggaagaaggaaaggagggccacatcctggccagacctcattgccaaggttttccgg
atcgatgtgaaagcagacgttgactccgtccaccccaccgacttctgccacaagtgctgg
aaggtcatgtacaggaggtttagcagcgccccacgcggggtttgcttcccgaggaaggcg
gccccggagtggctcccccacgcgccctcctgtgacctctgccgcgctgcccgccaggga
ctcaagaggaagagtcctcagccaagtgcacagctcagcaaaaggctcagaaccgtgctt
gagcgggcgggcagggcccgtgggcaccggagaagagcccgggccaggctctgcgacagc
ggggcaactgggaaggcctccgactgcgggaacgtgcaccttggtaccgagctcctggcg
gtggacttcccggcccacttcgtgaagtccatctcctgccggatctgtgagcacatcctg
gcggaccccgtggagaccacgtgcaagcacgtgttttgcagggtctgcattctccgccgc
ctcaaagccacgggcagccactgtccctgctgccggtatccctgcttccctaccgacctg
gagagcccggggaggtcctttctgagcatcctgaactccctgatggtgaaatgtccggcc
aaagggtgcgacgaggaggtcagcttggagaggtacaaccagcacgtggcgggccacaag
gactccgaccagacttttgtgcacatcaacaagggggggcggccgcgccagcccctgctg
tcgctgacccggagggctcagaagcaccgcctgcgggagctcaagctgcaggtcaaggcc
ttcgccgaccgggaggaggggggcgacgtgaagtccgtgtgcctggccctgttcctgctg
gcgctgcgggccaggaacgagcaccggcaggccgacgagctggaggccgtcctgcagggc
cgcggccccggcctgcagccggccgtctgcctggccatccgcgtcaacaccttcctcagc
tgcagccagtaccacaagatgtaccggaccgtgaaggccatcactgggaggcagattttt
cagccgctgcacgccctgcgggccgccgagaaggccctcctgcccggccaccacgccttc
gagtggcagccgcctctgcagaacgtgtcctccaacgcccacgttggcatcatcgacggc
ctgtcgggcctgtccccctgcgtggacgactaccccgtgggcaccatcgccaagcggttc
cgctacgatgcggccctggtgtccgctctgatggacatgcaggaggacctcctggaaggc
gtgagggcccggggcctggacgaccacctcgggggcccgttcaccgtggtggtcaaggag
tcctgcgacggcatgggggacgtgagcgagaagcacggcggcggcccggccgtccccgag
aaggccgtgcggttctcgttcacggtcatgaggatcaccgtggcccagggctcggaaagc
gtgcaggtgttcgaggagggcaaaccgaactcggagctgtgctgcaagccgctgtgtctc
atgctggcggacgaggccgaccacgagaccctgacagccatcctgagcccgctggtcgcg
gagagggaggccatgaagagcagccgcctcctgctggagatggggggcacgctgcggacc
ttcaggttcatcttcaggggcaccggatacgacgagaagcttgtccgggaggtcgaaggc
ctcgaggcctcgggctcggtctacatctgcaccctctgcgacgccacccgcctggaagcc
tctcagaacctcgtcctgcactccatcaccaggagccactcggagaacctggagcgctat
gaggtctggcgctccaacccctaccacgagtccgtggacgagctgagggaccgggtcaag
ggcgtctcctcgaagcccttcattgagacggtgccttccatcgatgcgctccactgcgac
atcggcaacgcggccgagttctacaagatcttccagctcgagataggccaggcctacagc
aaggccggtgcgtccaaggaggagcggagaaggtggcaggccacgctggacaagcatctc
cgcaagaagatgaacctgaagcccatcatgaggatgaacggcaacttcgccaggaagctc
atgaccaaagagacggttgaagcagtctgtgaactaatcccctctgaggagaggcacgaa
gccctgagggagctcatggacctttacctgaagatgaagcccgtatggcgatcttcgtgt
cctgcaaaagagtgcccagaatccctgtgccagtacagcttcaactcccagcgtttcgcc
gagctcctgtctaccaagttcaagtatagatatgagggcaaaatcaccaattacttccac
aaaaccctggcccacgtccccgaaattatcgagagagatggttccatcggggcctgggcc
agcgagggcaacgagtctggcaacaaactgttcaggcgcttccggaaaatgaacgccagg
cagtccaagtgctacgagatggaagacgtcctgaaacaccactggctgtacacctccaaa
tacctgcagaggtttatgaatgctcacaatgcgtataaaaagtccggccctcccttcgac
tcacaggcaggcttaggcgatccattaggcctagaggactctctggaaactcaagattcg
atggaattttaa
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