KEGG   Vulpes lagopus (Arctic fox): 121501530
Entry
121501530         CDS       T07435                                 
Symbol
NXF1
Name
(RefSeq) nuclear RNA export factor 1
  KO
K14284  nuclear RNA export factor
Organism
vlg  Vulpes lagopus (Arctic fox)
Pathway
vlg03008  Ribosome biogenesis in eukaryotes
vlg03013  Nucleocytoplasmic transport
vlg03015  mRNA surveillance pathway
vlg05014  Amyotrophic lateral sclerosis
vlg05164  Influenza A
vlg05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:vlg00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    121501530 (NXF1)
   03015 mRNA surveillance pathway
    121501530 (NXF1)
   03008 Ribosome biogenesis in eukaryotes
    121501530 (NXF1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    121501530 (NXF1)
   05168 Herpes simplex virus 1 infection
    121501530 (NXF1)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    121501530 (NXF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vlg03019]
    121501530 (NXF1)
   03009 Ribosome biogenesis [BR:vlg03009]
    121501530 (NXF1)
Messenger RNA biogenesis [BR:vlg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     121501530 (NXF1)
   mRNA cycle factors
    Stress granule specific factors
     121501530 (NXF1)
Ribosome biogenesis [BR:vlg03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    121501530 (NXF1)
SSDB
Motif
Pfam: LRR_NXF1-5 NXF_NTF2 Tap-RNA_bind TAP_C NTF2 LRR_4 LRR_8 UBA_8 LRR_9
Other DBs
NCBI-GeneID: 121501530
NCBI-ProteinID: XP_041629557
LinkDB
Position
11:77555888..77568051
AA seq 618 aa
MADEGKSYNEHDDRVSFPQRRKKGRGPFRWKYGEGNRRSGRGGSGIRSSRLEEDDRDVAM
SDAQDVPRIRHNPYPPRPNRRGDSWHDRDRIHVTVRRDRILPERGGAGTSQDGTSKNWFK
ITIPYGRKYDKSWLLSVIQSKCSVPFTPIEFHYENTRAQFFVEDASTASALKAVNYKILD
QENRRISIIINSSVPPHSVQNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQ
NIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSLVQKAPNLKILNLSGN
ELKSERELDKVKGLKLEELWLDGNPLCDTFRDQSTYISAIRERFPKLLRLDGHELPPPIA
FDVEAPTMLPPCKGSYFGTETLKNLVLHFLQQYYAVYDSGDRQRLLDAYHDGACCSLSIP
FTPQNPARSNLAEYFKDSRNVKKLKDPTLRFRLLKHTRLNVVAFLNELPKTQHDVNSFVV
DISAQTSTLLCFSVNGVFKEVDGKSRDSLRAFTRTFVAVPASNSGLCIVNDELFVRNASA
DEIQRAFAMPAPTPSSSPVPTLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSAQ
AFTHLKAKGEIPEVAFMK
NT seq 1857 nt   +upstreamnt  +downstreamnt
atggcggacgaggggaagtcctacaacgagcatgatgaccgtgttagtttccctcaaaga
agaaagaaaggccggggtcctttccggtggaagtatggcgaggggaaccgtaggtctgga
agaggaggttctggcattcggtcttcccgcctggaggaagatgacagagatgtggcaatg
agtgatgcccaggatgttcccagaatacgacacaacccctatcctccccgacccaaccgt
cgaggtgacagttggcatgatcgagatcgcattcatgttactgtgcggagagacagaatt
cttccagagagaggaggggctggcaccagccaggatgggacctcgaagaactggtttaag
attacaattccctatgggagaaaatatgacaagtcatggctcctgagtgtgattcagagc
aagtgcagtgtccctttcacccccattgagtttcactatgaaaatacacgggcccagttt
tttgtggaggatgccagtaccgcctctgcattgaaagctgtcaactataagattttggat
caggaaaaccgaaggatatctatcatcatcaactcctctgtcccaccccattctgtacag
aacgaactgaagccagaacaagtagagcaactaaagctgatcatgagcaaacgatacgat
ggttcccaacaagcacttgacctcaagggtctccgttcagacccagacttggtggcccag
aacatcgatgttgtcctgaatcgcaggagctgtatggcggctaccctgcgaatcattgag
gagaatatccctgagctcttgtccttgaacttgagcaacaataggctatacaggctggat
gacatgtccagccttgtgcagaaagcacccaacctgaagatcctcaacctctccggaaat
gagttgaaatctgagagggagctggacaaggtaaaagggctgaagctggaagagctgtgg
ctcgacggaaacccactgtgcgacaccttccgagatcagtccacctacatcagcgccatt
cgagaacgatttcccaaattattacgcctggatggccatgagttacccccgccaattgcc
tttgatgtcgaagcccccacgatgttaccgccctgcaaaggaagctattttgggacagag
accctgaagaacctggtcctgcacttcctgcagcagtactatgcagtttacgactctgga
gaccggcagcggctactagatgcctaccacgatggggcctgctgctccctcagcattccc
ttcaccccccagaaccctgcccgaagcaatctggccgagtacttcaaggatagcaggaat
gtgaagaagctcaaagacccgaccctgcggttccggctgctgaagcacacacgtctcaac
gtggtggccttcctcaatgagttgcccaaaactcagcatgacgtcaattcctttgtggta
gacataagtgcccagaccagtacgttgctgtgtttttctgtcaacggggtcttcaaagaa
gtggatggaaagtctcgggattctttacgagccttcacccggacatttgtcgctgttcct
gccagcaattcaggactgtgcatcgtaaatgacgagctatttgtgcggaatgccagcgct
gatgagatccagagagccttcgccatgcctgcacctacaccttcctccagtccagtgccc
accctgtccccagagcagcaggaaatgctgcaggcattctctacccagtctggcatgaac
cttgaatggtcccagaagtgccttcaagacaacaactgggactacaccagatctgcccag
gcctttactcatctcaaggccaagggcgagatcccagaagtggcgtttatgaagtga

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